BGIOSGA026606

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Revision as of 07:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026606| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026606, complete gene.| tag = OJ1770_...")
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Gene Name

BGIOSGA026606

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026606, complete gene.

LocusTag

OJ1770_H02.4

Ensembl Transcript ID

BGIOSGA026606-TA

Ensembl Protein ID

BGIOSGA026606-PA

Length

3678

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28059993..28063670

Sequence Coding Region

28062497..28063670,28061612..28061902,28061027..28061528,28059993..28060224

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28059993..28063670 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28059993..28063670 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTCGGTGAGAATGGCTTCTCCATCGGTACCCATAAGAAGGATGAGAAGGGAATGACGACGGTCAACAATGAGGCAGGTGTTCATGCATCTATGGTGTCTGATTATGAAAGCGCCCTCATGGTGGCTTTACTCAGTGATGTCGGTACTCCACGGTGCAGGCATGACATGTATAACAAGGATGAGGTTGATTTGGTCCAAAGGCGGATCATGTTCTGCGATATCACCAGAATGTGTAGTGATTGTGACAACATCAGTGGGCTTATGATCTTTGTGTGCTTGGGATGTGAAAAGCCTTTCTGCACTGTACACTCCAGTTTACATGCTGAGAGCACCAAGCATTTGGTTGGTCTGGTGTACCATAACCCGTATGTGGCGTGCTGCTTCCTGTGTAGTGAAACCTTTGTCCTCATTGGTGAGGGGGATAAGAGGATGCCAGTTGACAAAGCGGCAGGTGGTTATGCATCTGAGTCAGTTATTGGGCATGCCCATGCTATCAAAGGGATACCGAATCTTGGAAACACTTGCTACTTGAATTCATTGATGCAGTGCCTCCTTGTGCTTGGAAAACTGCGGGCAAGGATGTTAGGACCGGACGCTCCATCAGGGACCCTTGGTACTGCATTGCATGACCTCTTTGAGCAAACATACAGTGTGAATAATGCAACAGGCCTGCTGGAGACGTCATTGCTCTTGGATTGTGTATGCAATTTGGACCCACAGTTCGTAGGAGGTTTTATGCATGATAACCATGAATTGCTTTGCTGTTTACGTAAAAATTTGGATGAGGAGGAGAGGATGAGAACGCCTCCTAACATGCAAGACAGTTCTGCTGGTGCAGTGCCTCCTACGGTTTTTAATTCCATTTTCGGTGGTCAGCTATTTGTTACCAGATCGTGCAAATGTTGCTCGTTTTGTTCAGTTTCCCACGCTGTATTCTATGATCTCTCAGTACCAGTACCACCGAAGAAGCCTCCAGCCAAAAGTGTTGAATCAACACCATGGATTGAAGGTCACAGATCTCAACCGAAGATTTGTATCAACCAGTTTGAAGCAATACATAAGAGGAACACAGAAAAGACTCATAGAATTGTTGAAGATGCCGATTCTGATCCTGCTTCAGAATTGAAAGATATGGTCATGGTGAAAACATCAGAGCCATTGGAAGTTGATTATACTGAAGTGGAACAGATCTCACAAAGCAAGGACTATGTACAAGATCCTCAAAATGTGTTGGCTGATGTCAAAACTGCAGGAATGGATGCGACAACAACAGATACCCGCATTCCAGAATATATAGGGCCACATCCACCTGTCTCTCAATTAAGGGAAGAGAATGCACAGTTAGAATCATGCAATGATGTGGGGAAAGATGGCAATGCTATTCTCGAAGTTAGTTCAGAACACAAGATAGACACTTTCTCAGCAGAAGTTACTACAGAAGACAAGGGGAAAACTTGCAAGATGATAGAATGGACCTGTGAGAACTGCTCCAAAGGTGCTCGGAAGTCAGATGTCACTGAAGGTACATACAGTGAACAGATGCTGTCAAGTACTAATGAGGACACAGCAGTTGGTGGATACCAGAGGGAACAGTCAGAGAAGATAACATGCCAAAGTGAGCAATCCAACAAAAAACCTGAATGCCCTGAAGGTGTTCAAGACGCTGTACCTCGTTGTGTCCCAGCTGAGAGACAGGACAACCTGTTGAGCAGTCAGGATCAAAATGCCACCACACTAGATGAAGGAAGGGGTAAGCAAAAGCTTCATCATAGTGCACACCAAGTCGAAGAATGCCAAAATGAGCAGAAAGATAGGAATAAAGGTGCTACTCAAACACGGATTAGCAAGTTGCCACTTGTGTTAACCATTCATCTGATGAGATCTTTGTTGGGGCCTGATAAGGTGATGGGACATGTGAGCTTTAAGGAAATCCTTGATATGGGACTGTGCATGGACCCCAGCTCTGAAGACAAAGATAATTCCATTTATCGTCTAGCTGGTGTTATTGAGCACCATGGCCGCGGCAAAGATTCAGGGCACTTTGTTGCTTATGTGAGACCAAGTCCTCGGCAGCAGACCAATGGTTCTTCCTCATGGTTTTGTGCAAGTGATACCGACATCAGAGAAGTCTCTTTAGAAGAAGTTCTCAAGTGCGAGGCTTACCTTCTGTTCTACGAGAGGATGGAAGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAVGENGFSIGTHKKDEKGMTTVNNEAGVHASMVSDYESALMVALLSDVGTPRCRHDMYNKDEVDLVQRRIMFCDITRMCSDCDNISGLMIFVCLGCEKPFCTVHSSLHAESTKHLVGLVYHNPYVACCFLCSETFVLIGEGDKRMPVDKAAGGYASESVIGHAHAIKGIPNLGNTCYLNSLMQCLLVLGKLRARMLGPDAPSGTLGTALHDLFEQTYSVNNATGLLETSLLLDCVCNLDPQFVGGFMHDNHELLCCLRKNLDEEERMRTPPNMQDSSAGAVPPTVFNSIFGGQLFVTRSCKCCSFCSVSHAVFYDLSVPVPPKKPPAKSVESTPWIEGHRSQPKICINQFEAIHKRNTEKTHRIVEDADSDPASELKDMVMVKTSEPLEVDYTEVEQISQSKDYVQDPQNVLADVKTAGMDATTTDTRIPEYIGPHPPVSQLREENAQLESCNDVGKDGNAILEVSSEHKIDTFSAEVTTEDKGKTCKMIEWTCENCSKGARKSDVTEGTYSEQMLSSTNEDTAVGGYQREQSEKITCQSEQSNKKPECPEGVQDAVPRCVPAERQDNLLSSQDQNATTLDEGRGKQKLHHSAHQVEECQNEQKDRNKGATQTRISKLPLVLTIHLMRSLLGPDKVMGHVSFKEILDMGLCMDPSSEDKDNSIYRLAGVIEHHGRGKDSGHFVAYVRPSPRQQTNGSSSWFCASDTDIREVSLEEVLKCEAYLLFYERMEG</aaseq>

Gene Sequence

<dnaseqindica>1..1174#1769..2059#2143..2644#3447..3678#ATGGCGGTCGGTGAGAATGGCTTCTCCATCGGTACCCATAAGAAGGATGAGAAGGGAATGACGACGGTCAACAATGAGGCAGGTGTTCATGCATCTATGGTGTCTGATTATGAAAGCGCCCTCATGGTGGCTTTACTCAGTGATGTCGGTACTCCACGGTGCAGGCATGACATGTATAACAAGGATGAGGTTGATTTGGTCCAAAGGCGGATCATGTTCTGCGATATCACCAGAATGTGTAGTGATTGTGACAACATCAGTGGGCTTATGATCTTTGTGTGCTTGGGATGTGAAAAGCCTTTCTGCACTGTACACTCCAGTTTACATGCTGAGAGCACCAAGCATTTGGTTGGTCTGGTGTACCATAACCCGTATGTGGCGTGCTGCTTCCTGTGTAGTGAAACCTTTGTCCTCATTGGTGAGGGGGATAAGAGGATGCCAGTTGACAAAGCGGCAGGTGGTTATGCATCTGAGTCAGTTATTGGGCATGCCCATGCTATCAAAGGGATACCGAATCTTGGAAACACTTGCTACTTGAATTCATTGATGCAGTGCCTCCTTGTGCTTGGAAAACTGCGGGCAAGGATGTTAGGACCGGACGCTCCATCAGGGACCCTTGGTACTGCATTGCATGACCTCTTTGAGCAAACATACAGTGTGAATAATGCAACAGGCCTGCTGGAGACGTCATTGCTCTTGGATTGTGTATGCAATTTGGACCCACAGTTCGTAGGAGGTTTTATGCATGATAACCATGAATTGCTTTGCTGTTTACGTAAAAATTTGGATGAGGAGGAGAGGATGAGAACGCCTCCTAACATGCAAGACAGTTCTGCTGGTGCAGTGCCTCCTACGGTTTTTAATTCCATTTTCGGTGGTCAGCTATTTGTTACCAGATCGTGCAAATGTTGCTCGTTTTGTTCAGTTTCCCACGCTGTATTCTATGATCTCTCAGTACCAGTACCACCGAAGAAGCCTCCAGCCAAAAGTGTTGAATCAACACCATGGATTGAAGGTCACAGATCTCAACCGAAGATTTGTATCAACCAGTTTGAAGCAATACATAAGAGGAACACAGAAAAGACTCATAGAATTGTTGAAGATGCCGATTCTGATCCTGCTTCAGAATTGAAAGATATGGTCATGGTGAAAACATCAGAGCCATTGGAAGTTGGTAAGTTCATGCGCTCCGCTCATGTACTGAGTAAAGGAATGGAAGGCAATATTAAACAGTCCTGCAAACGTGCATGGTGTATCAGAAGTCAGAACATAAAACTTTTCATGATTGAAAGCACCAAACTATGGTAGTACCACAAATATTTGTTACTAGCTTTTGTTCTAGAGAAGACAAATGTCACTTTGCAAAATGGTGCTCTTGTACTAGATAAATGAAGAAACTTGTTCAAGGACTTGATTATACATGGACTGCAGAAATACCAGAACCTTCAGGATGTCTACATTAGACAAGCAGGATGTTTCAGCAAATTTAACATGGCATGGCTTTTTGTTGCAGTGTAACAGTAACACTTATTATTCACCCGGGGAAGATAGCTAGGGGTGTTGAATGCTCATTGCTTCAACTCTTCATATAATAAATTTTGCTCGAAGTTGTTGGTTGACAAGTACATGCAGAGATCTTGAAGAAAAGAAACTTCAAATAATCAAATGTAGAGGACAAAGATTCTCAAACCATGTAGAGAATGGAGGTTGCTCCTTTCATGAAGGCTGATGAGGACAAAACTAGAAACCTATTTTCTTGATTCTGCAGATTATACTGAAGTGGAACAGATCTCACAAAGCAAGGACTATGTACAAGATCCTCAAAATGTGTTGGCTGATGTCAAAACTGCAGGAATGGATGCGACAACAACAGATACCCGCATTCCAGAATATATAGGGCCACATCCACCTGTCTCTCAATTAAGGGAAGAGAATGCACAGTTAGAATCATGCAATGATGTGGGGAAAGATGGCAATGCTATTCTCGAAGTTAGTTCAGAACACAAGATAGACACTTTCTCAGCAGAAGTTACTACAGAAGACAAGGGGAAAACTTGCAGTAGTGACGTTGTTTGTGGAAAGGCACAGGATATCGACTCTCTTCCATCGATTACGAGTGCTTGGAACTGCACTTTAAAGCAGAGATGATAGAATGGACCTGTGAGAACTGCTCCAAAGGTGCTCGGAAGTCAGATGTCACTGAAGGTACATACAGTGAACAGATGCTGTCAAGTACTAATGAGGACACAGCAGTTGGTGGATACCAGAGGGAACAGTCAGAGAAGATAACATGCCAAAGTGAGCAATCCAACAAAAAACCTGAATGCCCTGAAGGTGTTCAAGACGCTGTACCTCGTTGTGTCCCAGCTGAGAGACAGGACAACCTGTTGAGCAGTCAGGATCAAAATGCCACCACACTAGATGAAGGAAGGGGTAAGCAAAAGCTTCATCATAGTGCACACCAAGTCGAAGAATGCCAAAATGAGCAGAAAGATAGGAATAAAGGTGCTACTCAAACACGGATTAGCAAGTTGCCACTTGTGTTAACCATTCATCTGATGAGATCTTTGTTGGGGCCTGATAAGGTGATGGGACATGTGAGCTTTAAGGAAATCCTTGATATGGGACTGTGCATGGACCCCAGGTACTGACTACTGCATTTTTTTTAACAAAATTGTAACTGTTAGCATTTCTACAGCAACTTCTAATGATTCTATTCCAGTTTAATCATTTTACTTATTTGCAGTAAGCTAATAAATATTATTTTTCCTAATTTGTTCCTTTGCTTTAAGAATGCATCTCTTCTACAATGAGTTGCTTTCAGATGACACAAGCATTGCTGGTTAATGAATAATCTGTATGCCCATTTTTCATGTTCTCTTGCTATGAGTATGTCGATGATTTTATTGTGCATGACAAGATGTTGTCCAGATGCCTCGTGTAATATTGACCATAACTAAATAAGACAAGATGTACTTATTGATGGCTATGTGGCTCCCTCTGCTAGTAATTTTCACAGATTATGATGTTTTGTGACAATTTGATTGTTTCAACTTTATTTAGGAAATTAGGTGTGATTTGGATTTTAGAATAATTTGAATTTGTGTGATTTTAAGAACTAGATTTGATTGTAGTATTGTACTCTACTCTTGTTTTTTTCCTATCCTTTAAAGTCAGATTATACATCCTTAGACTAAATCTAGGTTTGTCGATAATATCCATCATGCTGACCAAAGTTAATTCACTGCAGCAGAACATCATTTACTTTTATTTGGATACCTACCTCCTTTTGTTTTGAAAAATCACAATCTCCTTAAGAAACCATCCATTACGATTTCTCGATAACAATATTCATTTACAATGATATTTAACCTAGAAAGATGTGCTGTTGTTTACATCGAGCTATATGAGTTAAAGCCAGATCTGCTTTATTTTTATTTTTTTAGCTCTGAAGACAAAGATAATTCCATTTATCGTCTAGCTGGTGTTATTGAGCACCATGGCCGCGGCAAAGATTCAGGGCACTTTGTTGCTTATGTGAGACCAAGTCCTCGGCAGCAGACCAATGGTTCTTCCTCATGGTTTTGTGCAAGTGATACCGACATCAGAGAAGTCTCTTTAGAAGAAGTTCTCAAGTGCGAGGCTTACCTTCTGTTCTACGAGAGGATGGAAGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026606