BGIOSGA026645

From RiceWiki
Revision as of 07:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026645| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026645, complete gene.| tag = OsI_299...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026645

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026645, complete gene.

LocusTag

OsI_29933

Ensembl Transcript ID

BGIOSGA026645-TA

Ensembl Protein ID

BGIOSGA026645-PA

Length

3450

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27677734..27681183

Sequence Coding Region

27681124..27681183,27680739..27680862,27680575..27680668,27680357..27680490,27680199..27680280
,27679357..27679675,27679230..27679288,27678804..27678935,27678602..27678686
,27678110..27678135,27677734..27677959

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27677734..27681183 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27677734..27681183 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCAGCCAGTACACCAACAATATTCAGCATCGATGGGGTAATTCTTGATGAAGAGTTTAAGTCCAGCACAAAGGTTCATCACCTAGAATCAAGAGGTTCATCCATCCCAAACTATGGTTTTGAATTCTGCCCATTTGATCAGATACCATCTAAAAGCGGAATATCAAAACCATTGATAGATCTGATAGGAGTTATCAGCCATGTTGGGCCATATGATTATGCTGGCAAAACATCATCCAAGAAAAACAGAAAGCTCAAAATCCGTAGCAAAGATGAACAAGAACAAGAAATAGTCCTCTGGGGTGAATATGGAGGGTCATTTGATGAAGCTTTTGTTCTACAGAAATCTACAGACCACAAAATAGTAGTAGCTATACTTGCTGGACTTACAGCAGGGACTTATTTAGGCAAAACAGAGGCTACATCAAGTTCAGCAACACAAATATATTTTGACTCCGATATAACAGAGATTGCAGAATATCAAAGCAGGTACAAACTTCCTTTAACAATTAAAGATGAATCAGGAAATGAATCAGGAACTTTGGACGCAGTAGCATTCTACAATGTGGCTGAGGATTTGGTTGAGGTAAATGCTACTCAAGCTACCCAGAACTTGAAAATTGATGCAACAAAACATGCCATAGCTCTTGATATAGCCATTGGGAAAACAAGATTGTTTCACATTGCCATGAATACAAAGTACTCTTCACACTTCACTATCAATTATGTCCTCAAGAAGAGTTATCCCGTTGAAAATGAAAATACAAGTTTGATACTACCTACTCTGGAAAATACAAAGGTAGCAAAGGAATCAGCCACCAAACAACTTGCAACAGATGAAGGGCTAACCACCATGGAACATTGCAGCCCAGCAATTGCAAACACTATTCAGGTTGCAACAAATCAACTTTATCATCCCCAACAAGTAGATCTCAGCAAGGAAAAACAACCGTCAACAGAATTTTCTCCAGGACAAAATTCTAAGTGCCATAAAAAAGTAACGGAAACCTCCACCAATGGAGAGGAAAACCAGCTGCAGCAGCCAAAGATAGCTGATCAACAGCCATCGGGTCACAAGGAACAGATGGACCAACAACCAGAAAAAAATAGGAACCATGAGGCGCAACTCATCCACACCAACTACCTGCAAGCAGTTTCCAAGATTACTGCATCCAAATCAATAGCTATTTATATCACTCTCCAAGGGAAATCATCCACCGATAACCTCTCCAAGCTGCAGCCAACTCAAGCTCATGTTGTGAATTACATGAAAAATAAACTTCCTCACATGCATATCATTCTCGATGGAGAAAATGTCAAAAACAATGAGATTTAG</cdnaseq>

Protein Sequence

<aaseq>MASASTPTIFSIDGVILDEEFKSSTKVHHLESRGSSIPNYGFEFCPFDQIPSKSGISKPLIDLIGVISHVGPYDYAGKTSSKKNRKLKIRSKDEQEQEIVLWGEYGGSFDEAFVLQKSTDHKIVVAILAGLTAGTYLGKTEATSSSATQIYFDSDITEIAEYQSRYKLPLTIKDESGNESGTLDAVAFYNVAEDLVEVNATQATQNLKIDATKHAIALDIAIGKTRLFHIAMNTKYSSHFTINYVLKKSYPVENENTSLILPTLENTKVAKESATKQLATDEGLTTMEHCSPAIANTIQVATNQLYHPQQVDLSKEKQPSTEFSPGQNSKCHKKVTETSTNGEENQLQQPKIADQQPSGHKEQMDQQPEKNRNHEAQLIHTNYLQAVSKITASKSIAIYITLQGKSSTDNLSKLQPTQAHVVNYMKNKLPHMHIILDGENVKNNEI</aaseq>

Gene Sequence

<dnaseqindica>1..60#322..445#516..609#694..827#904..985#1509..1827#1896..1954#2249..2380#2498..2582#3049..3074#3225..3450#ATGGCCTCAGCCAGTACACCAACAATATTCAGCATCGATGGGGTAATTCTTGATGAAGAGGTATACTATCCTACACCAAAAAATGATTTATCCTATGCTTAACTTCCAATCTAAATATTACTGATAAAACGATGCAGTTTTAGACTTATACCAGTTCTAATCTTGCAGGGCACTATGGTGCAGTTTACTGTTCCAAAGAAACTTGAAAATGAATTTCGTCCATCACTAACTCTAGGTTGTGTCTACATGTTTGTTGATGTCAATACTGTTGACATTAAAAACAAAAAATATATTTACCACCACCAAAAATACATGTTGCAGTTTAAGTCCAGCACAAAGGTTCATCACCTAGAATCAAGAGGTTCATCCATCCCAAACTATGGTTTTGAATTCTGCCCATTTGATCAGATACCATCTAAAAGCGGAATATCAAAACCATTGATAGGTAATACTTGCATTTTCTATCTTCTTTTATTTAATTATTATACAACTAATCTCGAACATTTTGCCTCTAGATCTGATAGGAGTTATCAGCCATGTTGGGCCATATGATTATGCTGGCAAAACATCATCCAAGAAAAACAGAAAGCTCAAAATCCGTAGCAAAGAGTATGTATCACATATGCATTATATTTTTATGTTCCAAATGTATATGACACAGTAGTTTATACCTTTTGTTTCACCAATTTGTAGTGAACAAGAACAAGAAATAGTCCTCTGGGGTGAATATGGAGGGTCATTTGATGAAGCTTTTGTTCTACAGAAATCTACAGACCACAAAATAGTAGTAGCTATACTTGCTGGACTTACAGCAGGGACTTATTTAGGTCAGTCCCTCAAGTAACTTTTTAATACCCCCTCTCATAAACAACACTACTCACTTATGTGCTACAATTTTAAAAGGCAAAACAGAGGCTACATCAAGTTCAGCAACACAAATATATTTTGACTCCGATATAACAGAGATTGCAGAATATCAAAGCAGGTAACTTATATAGCTTATTGTCATACTGATTTTAATTTATATTTGCTTCAAAAATGCATCAATCTTCCTTCAAGCTACCAATGGGATATTCCAACTCTCCAACAACAAATGCCACGAGTTGAACATTTAACTCCACTTCAAGCAGCAGGTAAGCTATACAAACTTGAAGAAATATCAAGACTGCCCATTTCTGCTTTCGAGGTACCTCATTCACACTACATCACTAAATAAGTTGCTAATCTAATTAAATAATCATTTCAATATTTCTTACACACTAGGGAGGGAATTCATACAGTTGCATTGCAAAGGTATCAGCGATAGTACCATATACAAATTGGTACTACAAAATATGCAAATCATGTACTGCATCATACAATAGCAACTCCGACACTCCAAGATGTCAATGTCAGCATTCCATGCCAAAACCAATGTATGTGACATATCTATAATACTAATTTTTCTTATTAATTAATTCGTCTCACATTTCTATAAACAAATCTAATATACTCAAACAAACTTTCAGGTACAAACTTCCTTTAACAATTAAAGATGAATCAGGAAATGAATCAGGAACTTTGGACGCAGTAGCATTCTACAATGTGGCTGAGGATTTGGTTGAGGTAAATGCTACTCAAGCTACCCAGAACTTGAAAATTGATGCAACAAAACATGCCATAGCTCTTGATATAGCCATTGGGAAAACAAGATTGTTTCACATTGCCATGAATACAAAGTACTCTTCACACTTCACTATCAATTATGTCCTCAAGAAGAGTTATCCCGTTGAAAATGAAAATACAAGTTTGATACTACCTACTCTGGAAAATACAAAGGTAGCAAAGGTATACAAATGTTTGTCCTTACCATATCTTCTACCAACCATCTATAATCTAAAAATAACTTTTTTCAGGAATCAGCCACCAAACAACTTGCAACAGATGAAGGGCTAACCACCATGGAACATTGCAGGTTAACCAACATATGCCTTTTTTACTTATTATATTCTGCTTAACATTTCTATATTTATGACTACAACTAATAGCAGCAAAGAAGACCAACATCCCACTACGCCACCGTCCCTACAACCTCCAGAAACAACTCTAGACAACAATACAGTAAACCAAATTATACCTTCAGCAAAGAGAGCTCTTCAATTTGAAAAGGAGTTACACATTGATCAACCAAGCTACTGCACTGATACAAGTTCTTTTTCCAGAATATACAAACTATTCTTCAACTAAATTCCTTTCATATATGCATCAGCCCAGCAATTGCAAACACTATTCAGGTTGCAACAAATCAACTTTATCATCCCCAACAAGTAGATCTCAGCAAGGAAAAACAACCGTCAACAGAATTTTCTCCAGGACAAAATTCTAAGTGCCATAAAAAAGTGTACGTGCACACCTTAAGTTTCAGCCTATAAACATATATATGTGTGTGTCGCGCGCGTGCATATATATATGTATGTATGTATGTATGTTTTGCTACTAATTTGACTGCTAAATTCAGAACGGAAACCTCCACCAATGGAGAGGAAAACCAGCTGCAGCAGCCAAAGATAGCTGATCAACAGCCATCGGGTCACAAGGAACAGGTACAACTCTTCAAATCCTTCACAATTCTCCTACAACATGGCCTTTTATCAGCAACATATATAGATTTTCTTAAAAAAATTAGACCTGCACCAAATCTGTCACCATCACTGCTAACGATTTCCTTAAGAAATTTAAACCTGCACCAAATCTATCACCATCATTGCTAACTTATCTTTGCAACCATTACTTGCAAGTTTACTGGCAAAACCAACCAAATCTGAAATATGGCATTTATATCTATTCCATATTTTATCCTCAATAATAAAAGACTCAAGATATGATTCTTAATCATATCTGATTCTGCAATAAATGAGAAAACAAAATTAGTATCCTTATTATCACCACCGAAATACTATAAGAATCACCCACAACACCACAACAACATGTGCACTGCTCAATTTCTCATACCACAGTCCTTCCTTCACAAAATTTCTTCTGCAAACACAACGTCCATTGCCAACACAGATGGACCAACAACCAGAAAAAAATAGGTTAGCTCTCACTATCCAGGTTCAGCTATAGCTTCCTAATTACATAGTTTTCAAGCTTATATTTTATATTTAACATGCTTCATGCATTTCAGTGCTATGTACATTGTATATGCCTATCTATACATCATCAAACGCATTACTCTTCTTCAGGAACCATGAGGCGCAACTCATCCACACCAACTACCTGCAAGCAGTTTCCAAGATTACTGCATCCAAATCAATAGCTATTTATATCACTCTCCAAGGGAAATCATCCACCGATAACCTCTCCAAGCTGCAGCCAACTCAAGCTCATGTTGTGAATTACATGAAAAATAAACTTCCTCACATGCATATCATTCTCGATGGAGAAAATGTCAAAAACAATGAGATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026645

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA026645&oldid=32902"