BGIOSGA026655

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Revision as of 07:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026655| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026655, complete gene.| tag = OsI_299...")
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Gene Name

BGIOSGA026655

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026655, complete gene.

LocusTag

OsI_29915

Ensembl Transcript ID

BGIOSGA026655-TA

Ensembl Protein ID

BGIOSGA026655-PA

Length

5530

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27603828..27609357

Sequence Coding Region

27609352..27609357,27608651..27608707,27608399..27608563,27608227..27608311,27607924..27608014
,27607648..27607812,27607445..27607567,27607038..27607113,27606831..27606969
,27604832..27606675,27604469..27604659,27603828..27603981

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27603828..27609357 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27603828..27609357 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCTGATCCTGACACAGATGAGGTTTATGCTCGAATGACTCTCCAGCCAGTTAGCAATGTGACCCAGTGTGACAAGGAGACATTGCTAGCATCAGAGCTTGCGCTGAAGCAAACCAGGCCACAAACAGAATTCTTTTGCAAAACACTGACCGCCAGTGATACAAGCACTCATGGAGGTTTCTCTGTGCCACGCCGTGCCGCTGAGAGGATTTTTCCTCGTCTTGACTTCTCCATGCAGCCTCCTGCCCAGGAACTGCAGGCCCGGGATTTGCATGATAATGTTTGGACATTTCGTCATATATACCGGGGTCAGCCTAAAAGGCATTTACTGACTACGGGCTGGAGCCTATTTGTCAGTGGAAAGAGATTACTTGCTGGTGATTCAGTCTTGTTTATTAGGGATGCAAAACAGCAGCTCCTCTTGGGGATCAGACGAGCAAATAGGCAACCTACGAACCTCTCATCATCTGTCTTATCTAGTGATAGTATGCATATTGGAATTCTTGCTGCAGCAGCCCATGCTGCAGCGAATAACAGCCAATTTACAATATATTATAACCCAAGGGCCAGTACTTCCGAATTTGTGATTCCTTTTGCCAAATACCAGAAGGCAGTGTATGGTAACCAATTATCTCTTGGCATGCGGTTCAGAATGATGTTTGAAACTGAAGAGTCAGGAACAAGAAGGTACATGGGTACAATAACTGGTATAAGTGATCTGGATCCAGTAAGGTGGAAAACATCTCATTGGCGCAATATTCAGGTTGCATGGGATGAAGCGGCACCAACTGAGAGACGCACCAGGGTTTCCCTCTGGGAGATAGAGCCTATCATTGCTCCATTCTTCATCTACCCCTCACCATTATTCACCGCAAAACGTCCAAGGCTACCTGGGATGACAGATGACGAGACTGAAATGGACGGTCTTCTCAAGAGGGCCATGCCATGGGTTGGTGAGGAGATTTGCAAGAAAGATCTGAATATTCAGAACAGTGTAGTGCCTGGTCTAAATCTAGCTCAGTGGATGAACATGCAGCACAGCTCCTCGCTTCCTGGCACGGTTGTGCAACCAGAGTTACTAAACTCATTAAGTGGAAAACCTGTACAAAATTTGGCTGCAGCTGATTTATCAAGGCAAATCAGTTTTCACCCGCAGTTCTTGCAACAAAACAACATCCAGTTCAACACTGCGTTGGTACCTCAACAAAACCAACAGACAGAACAATTAGCGAAAGTTATCCCTACACCAAACCAATTGGGAAGTGTTATAATACCGCAGAAGGTGGTTCAGGATTGCAACTCTGAACAAAGGCAGCATGTGGTTACTCAACCAGTGCAAGGCAGCCAGCCAAACATAAACATTCCACAGCCTCAGCTTGTTGTTCAGGCTCAGCTTCAGCAACCGCAAGTCATTCTCCAGGCGCAACTGCAGCAACCTCAAGTTGTTGTCCAGGCCCAACTCCAGCAAACGCAACCTTCGGTCCAAAGTCACACTGTCTTACAAGGAGGTCTTCAACAAATCCAGCTTCTCCAGCAGCAACAGCCACATGTGCAGCACCAGCAGATACCGCAACAGTTACATCATCAGCAGCAGCAAACACAACAGTTGCAACCTGTCCAGCAGGTTCAGCAGTCAGTACAGGAACATCAGCAAATAAAGATACAACCTGTTCATGTTTCCATGGATGCAAGTATGAATACGCAGGTGGCAGATCATCAAATGAAACTACAACTACTCAAGGCTTTACAGCCACAGCAGCCTCTGATCTCAGAGCAGCAGAAGATGCTTTTGGATTTGCAGCAGCAAGTGATAAATTCACAGTCAGCTCCTCAGCAGTGTGTACAGGTAACAAACCAAGCTATTAGTTTACATAACAGTAACACTATTCAATACCCGACACAGCAAAAGGTTCAGTCTCACCAAGTTCAAGACTTAACTGGGAATGTCATTCCTAATTCAAAATCAGACATCGCTACTTCCATGGGTGCTAGTTCTTTGCATGTAGCTGGTGGACGCCAATTATTGAAGACAGATGATGTTCCGTCTACTTCAACATCACCATCCACTAACAGCAATCCTGTTCTTCTGCAATCCATCCCAAGTAGCTCCAAGAACCAAAGTTTAACTACAGCAGGAAAGACATCTCAATCATCTGTTGTGTTGGGTCCTACGATCGAACAGGACACAAAGCCATATCAAAATGTAAAGCAAACAGTTATGATTCCCAAGACGACAGAACAAAGGCCAGCTACTGGACAAGACTGCATAAATAACAATCCTCAAATGGATTACTTGGACACATCCTCTTCAGCTACTTCGGTTTGCCTTTCCCAGGCTGATGGATCATTGCAACAAAACTTTCCACCTTCATCCTTCCACCAGCATCACTTGCTAAAAGACACAGTTCCAGATAGCGAGTTTGAGGTTACAGATCCAAGAAATAACCTTCTATTTGGGGTGAATATTGATGGTCAACTGGGTTTACCACTTAATGCAGACCTGCTTGCGAATGACATTGGAACCGATAAATACATGGATCAGTTGCCAGGAAATGGCATTTCTAACTTCATTTCATCAAAGGATTCTCAACAAGAGTTATCATCTTCAATGATTTCACATTCATTTGGAGTTGCTGATATGGCATTCAATTCTATAGATTCTGCAATCAATGATACCCCATTCTTAAATAGAAATTCCCGGTCTGCAGCAGGTCCTGCACATCAACGGATGAGAACCTACACCAAGGTACACAAGCGTGGTGCGGTGGGAAGATCAATTGACATCAATCGATATTCTGGATATGATGAGCTGAAACATGACGTTGCTCGGATGTTTGGTATTGAGGGGCAGCTTGGTGATCAAAATAGAGTTGGCTGGAAGCTAGTATATGAAGATCACGAGAAGGATGTTCTACTAGTTGGTGATGATCCATGGGAGGACTTTGTGAAATGTGTACGATGTATCAGGATTCTTTCTCCACAGGAAGAAATGCAGATGAGATTAGTCGGCGACTTTGGAGACAGCTTTCTACCCAACCAAGCTTGCAGCAGCTCTGATGGGGGTCATCCCTGGAGGATAACCGGCGACTAG</cdnaseq>

Protein Sequence

<aaseq>MEADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPRLPGMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGTVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQQNNIQFNTALVPQQNQQTEQLAKVIPTPNQLGSVIIPQKVVQDCNSEQRQHVVTQPVQGSQPNINIPQPQLVVQAQLQQPQVILQAQLQQPQVVVQAQLQQTQPSVQSHTVLQGGLQQIQLLQQQQPHVQHQQIPQQLHHQQQQTQQLQPVQQVQQSVQEHQQIKIQPVHVSMDASMNTQVADHQMKLQLLKALQPQQPLISEQQKMLLDLQQQVINSQSAPQQCVQVTNQAISLHNSNTIQYPTQQKVQSHQVQDLTGNVIPNSKSDIATSMGASSLHVAGGRQLLKTDDVPSTSTSPSTNSNPVLLQSIPSSSKNQSLTTAGKTSQSSVVLGPTIEQDTKPYQNVKQTVMIPKTTEQRPATGQDCINNNPQMDYLDTSSSATSVCLSQADGSLQQNFPPSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQLPGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQRMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQACSSSDGGHPWRITGD</aaseq>

Gene Sequence

<dnaseqindica>1..6#651..707#795..959#1047..1131#1344..1434#1546..1710#1791..1913#2245..2320#2389..2527#2683..4526#4699..4889#5377..5530#ATGGAGGTTTGGTGCCATTTGATGCAATGCTGGAGGAGCATGGAGTTGGGCATCCTCCCAATCTGTCTTCCTTTTCTGATGCTCCTTTACATGTTGTTTAATCTTATCTGCAGATAACTTTAATCTTTTTGCAACTTTCAACTACGAACATACAACTTTTGTTAATCTTCTTTCAGTTCTTAGCAAATTCAGTTATACGGCACTGTAATTTGAATCAACCCAAACGAAAAGTGCTCATGTTACTTGGTTGCTTCTGTTTTACCATGGAGTTTGATATAGAAAACATGTGTGTTTCTGTACACAAGTTCTATGATGAGAGTTAACAAAAGCTTTGAGAGTTACTAGCACACCGTTTGTAAATGTGCAAGTTTTGTGCAAGTGGTTTTGGGGTTTCATGGAGAACAATTCTCATTCCTGGATACCCGATTTCAGGTTGCAGCATCTATGCGAAAGGACGCAGATGCGCAAATTCCAAGCTATCCAAATCTTCCATCAAAGCTGATATGCATCCTCCACAGTGTCACCATGCTTGTAATCTCTGCCACTTTGAGCATCAGTAAACAGAAAAAGAGCTCCACGCTTTATTAGTGCTCTATTATGCCAATAATTTGAACTTCTGTACTGACACATTTCTTGACAAAACATGACAGGCTGATCCTGACACAGATGAGGTTTATGCTCGAATGACTCTCCAGCCAGTTAGCAATGTAGGTTGCAATTTCCCAAATTCAGTTAGATCTTCTGGATTATGTGATGTAGCAGTACCGACATGATTTTGGAATTGGGATTATTAGGTGACCCAGTGTGACAAGGAGACATTGCTAGCATCAGAGCTTGCGCTGAAGCAAACCAGGCCACAAACAGAATTCTTTTGCAAAACACTGACCGCCAGTGATACAAGCACTCATGGAGGTTTCTCTGTGCCACGCCGTGCCGCTGAGAGGATTTTTCCTCGTCTTGTGAGCATACTTTAACCTTATGGAAAACAAAGTGTTGATTCTTTCTTGGTTTCTTCTACTAACTTATGCGCACTGTATTATGTTTAGGACTTCTCCATGCAGCCTCCTGCCCAGGAACTGCAGGCCCGGGATTTGCATGATAATGTTTGGACATTTCGTCATATATACCGGGGTACAGTAGAAAAATACTAATATTCCGTTGTTCCCTTTGATGCATGATAAAAGCTAATGCAACTTAGTAAAGGCCTTACTCTTGTAAACGAAACCCGTATTCAACTGCCGTATGTCAGCTTTGGCCTTTGGTTACTAAAAGGTTCAGGAAACTCTGGTGTTACTTCATGCTTTAATGTCTCAAAGTTTATGAGTTCTCTTTCTCTTCACCAGGTCAGCCTAAAAGGCATTTACTGACTACGGGCTGGAGCCTATTTGTCAGTGGAAAGAGATTACTTGCTGGTGATTCAGTCTTGTTTATTAGGTACACTGATTATGCCAATAAACTGTTTTTTCTGCCTCGCTATCGCTTGAAAATGTTGCTGTAACAAATCAATCTTGAGGGAGTACTAAACTTTCTTCATTCCGACCATAGGGATGCAAAACAGCAGCTCCTCTTGGGGATCAGACGAGCAAATAGGCAACCTACGAACCTCTCATCATCTGTCTTATCTAGTGATAGTATGCATATTGGAATTCTTGCTGCAGCAGCCCATGCTGCAGCGAATAACAGCCAATTTACAATATATTATAACCCAAGGTAAACATCTTTGGCTAGGTTTAACGTATGAAGAGATGATATGTTATTAGTTTTGTTTGAACTTTTTTTTGTTTATTCAGGGCCAGTACTTCCGAATTTGTGATTCCTTTTGCCAAATACCAGAAGGCAGTGTATGGTAACCAATTATCTCTTGGCATGCGGTTCAGAATGATGTTTGAAACTGAAGAGTCAGGAACAAGAAGGTATAGTTTCTGAACTTTATCTTATTTGTGTAACATATACTTGTTCTCATTACTTCAAATTCCTTTTAGTTGAAAATTTTTTATCCTAAACCCCCCTCTAAGGGGTGGATATCGAGCTACCTTGACTCCCACAGGGACCCTGCTACAGACTGGACCTAAAAAGATCCTTGGTGTGTGTTGTGCACACTTAGGATATTTTGGGAGCATCATTTTTCTGCATTGAGTCACATTCAGCTCTCTGTGTTGACTGTGTTCATGTTCATGCACTTGTGAATGTGTGATGTTTTATAAGATTCTTTTCTGAATCGTATTTGTGACATCTTCCTTGCAGGTACATGGGTACAATAACTGGTATAAGTGATCTGGATCCAGTAAGGTGGAAAACATCTCATTGGCGCAATATTCAGGTTTGGTCTGATTCCTTACAAAGCTATATCTCCTTTGTTTTTGCTGGAATAAGTAGAACTATATGCAGGTTGCATGGGATGAAGCGGCACCAACTGAGAGACGCACCAGGGTTTCCCTCTGGGAGATAGAGCCTATCATTGCTCCATTCTTCATCTACCCCTCACCATTATTCACCGCAAAACGTCCAAGGCTACCTGGGATGACAGGTAAACAGTTACTGATCTGATAAAAGGTCACTCTATGGATGATTAGTACTCATATCAGACTATGATTATTGTGTAACCAAAGTTTTCGACTGAATATCAGTTCTAACAGAAAATTATGATTTCATTATCTTATAATAATTTAATCACATCTGTAGATGACGAGACTGAAATGGACGGTCTTCTCAAGAGGGCCATGCCATGGGTTGGTGAGGAGATTTGCAAGAAAGATCTGAATATTCAGAACAGTGTAGTGCCTGGTCTAAATCTAGCTCAGTGGATGAACATGCAGCACAGCTCCTCGCTTCCTGGCACGGTTGTGCAACCAGAGTTACTAAACTCATTAAGTGGAAAACCTGTACAAAATTTGGCTGCAGCTGATTTATCAAGGCAAATCAGTTTTCACCCGCAGTTCTTGCAACAAAACAACATCCAGTTCAACACTGCGTTGGTACCTCAACAAAACCAACAGACAGAACAATTAGCGAAAGTTATCCCTACACCAAACCAATTGGGAAGTGTTATAATACCGCAGAAGGTGGTTCAGGATTGCAACTCTGAACAAAGGCAGCATGTGGTTACTCAACCAGTGCAAGGCAGCCAGCCAAACATAAACATTCCACAGCCTCAGCTTGTTGTTCAGGCTCAGCTTCAGCAACCGCAAGTCATTCTCCAGGCGCAACTGCAGCAACCTCAAGTTGTTGTCCAGGCCCAACTCCAGCAAACGCAACCTTCGGTCCAAAGTCACACTGTCTTACAAGGAGGTCTTCAACAAATCCAGCTTCTCCAGCAGCAACAGCCACATGTGCAGCACCAGCAGATACCGCAACAGTTACATCATCAGCAGCAGCAAACACAACAGTTGCAACCTGTCCAGCAGGTTCAGCAGTCAGTACAGGAACATCAGCAAATAAAGATACAACCTGTTCATGTTTCCATGGATGCAAGTATGAATACGCAGGTGGCAGATCATCAAATGAAACTACAACTACTCAAGGCTTTACAGCCACAGCAGCCTCTGATCTCAGAGCAGCAGAAGATGCTTTTGGATTTGCAGCAGCAAGTGATAAATTCACAGTCAGCTCCTCAGCAGTGTGTACAGGTAACAAACCAAGCTATTAGTTTACATAACAGTAACACTATTCAATACCCGACACAGCAAAAGGTTCAGTCTCACCAAGTTCAAGACTTAACTGGGAATGTCATTCCTAATTCAAAATCAGACATCGCTACTTCCATGGGTGCTAGTTCTTTGCATGTAGCTGGTGGACGCCAATTATTGAAGACAGATGATGTTCCGTCTACTTCAACATCACCATCCACTAACAGCAATCCTGTTCTTCTGCAATCCATCCCAAGTAGCTCCAAGAACCAAAGTTTAACTACAGCAGGAAAGACATCTCAATCATCTGTTGTGTTGGGTCCTACGATCGAACAGGACACAAAGCCATATCAAAATGTAAAGCAAACAGTTATGATTCCCAAGACGACAGAACAAAGGCCAGCTACTGGACAAGACTGCATAAATAACAATCCTCAAATGGATTACTTGGACACATCCTCTTCAGCTACTTCGGTTTGCCTTTCCCAGGCTGATGGATCATTGCAACAAAACTTTCCACCTTCATCCTTCCACCAGCATCACTTGCTAAAAGACACAGTTCCAGATAGCGAGTTTGAGGTTACAGATCCAAGAAATAACCTTCTATTTGGGGTGAATATTGATGGTCAACTGGGTTTACCACTTAATGCAGACCTGCTTGCGAATGACATTGGAACCGATAAATACATGGATCAGTTGCCAGGAAATGGCATTTCTAACTTCATTTCATCAAAGGATTCTCAACAAGAGTTATCATCTTCAATGATTTCACATTCATTTGGAGTTGCTGATATGGCATTCAATTCTATAGATTCTGCAATCAATGATACCCCATTCTTAAATAGAAATTCCCGGTCTGCAGCAGGTCCTGCACATCAACGGATGAGAACCTACACCAAGGTTTGTTATCTAGCTTAGCCTCAACTTGTTACTTTACACCATCTTTTTTAGAAAAAAATTTCGAGTTAAGTTACAATCTTAGGATGACTCTTAACTAAGATTCATGAAATAATTGCACATGTTGATGATTATTGCAGTGGACACCTGTGCTGACCAAAATAATTATCTACAGGTACACAAGCGTGGTGCGGTGGGAAGATCAATTGACATCAATCGATATTCTGGATATGATGAGCTGAAACATGACGTTGCTCGGATGTTTGGTATTGAGGGGCAGCTTGGTGATCAAAATAGAGTTGGCTGGAAGCTAGTATATGAAGATCACGAGAAGGATGTTCTACTAGTTGGTGATGATCCATGGGAGTAAGTCAAATCCCATAAACTTATTTTTCATCTGCACATACAAAACTAACAATAATATCTTTCTGGAGGCGTGGATCTTTTTTTTTACCGAAGATAAACCCATGGATGGGGTTAGCTGATTTGAGTGAACATGATCTTGGAGCAACTTCATATAGATTCTGGATTTATTGTTTGTGAGCTTAGTTTCACTAACACGCAAAGATCTGTACATCCCTGCTTGTTAGTTTCACATGCCATAGAATGTTTTCTAACTCCAGCTGAATATTTACTTTACCTGTTAAAACATGTAGAGAGACTCTAAAAGCAACTCTGTGTTACGTAAAACCAATCAAGCATATTTTCTGCAGTGATCTCACCACTTACCTGATTGGGAAATATAACGAGGCTCCATTTTTTTCAACTGATCATACTTATTCACCTATCAAAGTATAGCTATTTCTAATTGTATCACGGTGATAACTAAGAACCGATGGCTTTGCATGTGCAGGGACTTTGTGAAATGTGTACGATGTATCAGGATTCTTTCTCCACAGGAAGAAATGCAGATGAGATTAGTCGGCGACTTTGGAGACAGCTTTCTACCCAACCAAGCTTGCAGCAGCTCTGATGGGGGTCATCCCTGGAGGATAACCGGCGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026655

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA026655&oldid=32911"