Os11g0128800

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0128800| Description = Similar to Homoserine dehydrogenase-like protein| Version = NM_001072171.1 GI:115483954 GeneID:4349660| Length = 397...")
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Gene Name

Os11g0128800

Description

Similar to Homoserine dehydrogenase-like protein

Version

NM_001072171.1 GI:115483954 GeneID:4349660

Length

3974 bp

Definition

Oryza sativa Japonica Group Os11g0128800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1311313..1315286

Sequence Coding Region

1311468..1311602,1311969..1312038,1312189..1312352,1313035..1313088,1313469..1313509
,1313658..1313750,1313840..1313927,1314205..1314258,1314349..1314464
,1314649..1314726,1314870..1315020,1315090..1315200

Expression

GEO Profiles:Os11g0128800

Genome Context

<gbrowseImage1> name=NC_008404:1311313..1315286 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1311313..1315286 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccggtgaggtcggtcctccccgtcgtcctcctcggctgcggcggcgtcggccgccaccttctccgccacatcgtctcctgccgcccgctccacgccaaccagggcgtcgccatccgggtgctcggcgtcgccgacagctcctctctgctcgtcgccgacgacctccactccaacggcttcgacgacgcgctcctcgctgatctctgcgccgccaagtccgccggctcgcccctatcttccctgctcgctcgagggcaatgtcagctattcaacaacactgaggctaggaggaaagtcattgacactgccagcgttctagggaaaacaactggtcttgtactagttgattgttctgcaacttatgatactgttggcatgctaaaggatgccgtggattgtggatgttgtgttgtattggcaaacaagaaaccgcttacttgtgcttatgaggatttcgaaaagttggtctccaacttccgtcgcataagatttgaatctactgttggagccagtctgcctgtaatagcttctgtgactcgtattattgcctctggagatccagtttctcgtattgttggcagtctgagtggtacacttggttatgtgatgagtgagctggaggatggaaagaaatttagtgaagttgtgaaaactgccaagtctcttggctatacagaaccagatccacgtgatgatctcagtgggatggacgtagctagaaaggcattgatcttagctaggcttctggggcaacagattagcatggagaatattaatgttgagagtttataccccagtgaattaggacctgatgcaatgtccacaaaggacttccttgaaagtggtttagtacagcttgataaaagcattgaagaaagagtaaaggcagcatctttgaaaggaaatgttcttcgctatgtctgtaagattgaaagcacagggtgccaagtgggccttgaagaactcccgaaaaactctgcactgggaaggttgagaggaagtgacaatgtggtggagatatacagcagatgctacgagagcgcccctctggtgattcagggcgctggagctggcaatgataccactgcagctggagttcttgctgacatacttgatctccaggatctcttccacaaaacggcttga</cdnaseq>

Protein Sequence

<aaseq>MAAPVRSVLPVVLLGCGGVGRHLLRHIVSCRPLHANQGVAIRVL GVADSSSLLVADDLHSNGFDDALLADLCAAKSAGSPLSSLLARGQCQLFNNTEARRKV IDTASVLGKTTGLVLVDCSATYDTVGMLKDAVDCGCCVVLANKKPLTCAYEDFEKLVS NFRRIRFESTVGASLPVIASVTRIIASGDPVSRIVGSLSGTLGYVMSELEDGKKFSEV VKTAKSLGYTEPDPRDDLSGMDVARKALILARLLGQQISMENINVESLYPSELGPDAM STKDFLESGLVQLDKSIEERVKAASLKGNVLRYVCKIESTGCQVGLEELPKNSALGRL RGSDNVVEIYSRCYESAPLVIQGAGAGNDTTAAGVLADILDLQDLFHKTA</aaseq>

Gene Sequence

<dnaseqindica>3685..3819#3249..3318#2935..3098#2199..2252#1778..1818#1537..1629#1360..1447#1029..1082#823..938#561..638#267..417#87..197#gtgggctgggccgaatagacgattgaacaacaggccgaagaaaccaaaaatggtgtagcctgaaggtgaagctgtcaagcacccaaatggcggcgccggtgaggtcggtcctccccgtcgtcctcctcggctgcggcggcgtcggccgccaccttctccgccacatcgtctcctgccgcccgctccacgccaaccaggtacctcgtctcgtctgacccgtccccttcctctccgattcggtgctctcatcgcccatacttgtatagggcgtcgccatccgggtgctcggcgtcgccgacagctcctctctgctcgtcgccgacgacctccactccaacggcttcgacgacgcgctcctcgctgatctctgcgccgccaagtccgccggctcgcccctatcttccctgctcgctcgaggtatccccattctatttcgttattccttttttctttttttagaatattccatagcttccttgggtaatgaatactttgtcatgaatttgcatttgtacacgtgatatttaaagtaatggatggttggattgtgcaattttcagggcaatgtcagctattcaacaacactgaggctaggaggaaagtcattgacactgccagcgttctagggaaaacaactggtctgtgatccttctccctatgcagaatacattgcgcgctaagtttttgaattctctggaatagaaaccagtggggaaaaaaaaggaatctttgatatgctgtatgattgttgattagttcctttttttaaaaaaaaggagtgtaatatcttctttggttcttatcttatgatcctttttgcaggtcttgtactagttgattgttctgcaacttatgatactgttggcatgctaaaggatgccgtggattgtggatgttgtgttgtattggcaaacaagaaaccgcttacttgtgcttatgtaatgtcctccttaagtcttccatccagtattttttgtcattttgacacataagttcatgcttaccaaatgtgttcctttttcatgcaggaggatttcgaaaagttggtctccaacttccgtcgcataagatttgaatctactgtatgcatacgccactagtaattccttcatttcactattaaatgttattatacttttcccccaatcttaatgaaatttggtcggcgtttctttcgccgacccagcaaaaaatgttattatatttatttttcatggaaatccattcatttatttgatctggggttgtatgatatgactgtggccatatgattaagcacagcctttttttttggcaatttcttttattattacaaatgagttgagggtctctgctgatatttactattcctactcttaggttggagccagtctgcctgtaatagcttctgtgactcgtattattgcctctggagatccagtttctcgtattgttggcagtctgagtggtacacagttattattttatttgtttgtaaaaggtgtctgttttccaaatagcagagcaatgtacacttccattcctatgattctgcaggtacacttggttatgtgatgagtgagctggaggatggaaagaaatttagtgaagttgtgaaaactgccaagtctcttggctatacagaaccaggtctaaaaatttattcattcattggacattataacatcaatgtgtactcagtattcaattccttatctgtaattacagatttcatatttaccgaaagtctactgatgcttgtgataagtgcacttactcagttgttcaattttggtagatccacgtgatgatctcagtgggatggacgtagctagaaaggttaatttttcatctgatgaattacatgctacgctacataattcactttatatgtgcctttgttaaccattgccacaatttttttctactcctaagtccatgaactaatatatcatgagctgctgctgtgtatctgttttttgtttaattgtgtcataccatgatttgatccaaaatatattcactagcacatcaatatcataaatactaaagttcaggaaggcctatatcatgcacttatcctatttggaatttcaataataaccttgcatagacattgacataagggaggtttatgttcaggttcagatgttttatttgattatttcattctttgtcaattagatgatgaggtctaacaagttcatcttggaatgcaggcattgatcttagctaggcttctggggcaacagattagcatggagaatattaatgtatgcatataattaatcttgatggtatttgcactctaatgttttgtgtaaacataggttggtgtgcatgggctgatgttttcgctaatataactgagggtctgagacttgtagcaagtgttttcctgttattctggctgttcaaaaaaacctagttggtttaaaatgatgcatttcttgttgataccattcttggtgatagtttgcccgaagcattacttggaaccatctttttctctttagttctacttctataatattttggctacatggattctatggataaggaccgacactcttctacaatataggtcactggatatcaccatagacttgtgttcaggattattggggattccgatgaattatacaccttatgtatcttatagtctgaaaatgaaatgaataccctccaaatcttggaagttgttatttagtttatgtagccattagctttgttgagtggctgctagttcagttgttttctatgataccagaactttgattttgaaagattttaacccctaaatcacttattccgaaattttctaattatgcatagacactatatttatgcatgtgttatgtcgtacattccagttagaagaccgcttgtaattgagcaggcaccctgttcgtagaaaaaagatcaggtgtgctaattttttgcaattatcttcaggttgagagtttataccccagtgaattaggacctgatgcaatgtccacaaaggacttccttgaaagtggtttagtacagcttgataaaagcattgaagaaagagtaaaggcagcatctttgaaaggaaatgttcttcgctatgtctgtaagattgaaagcacagggtatgtatccttttattgtgctatgccctctgaatcactaattagtgtttcaatactagcatactattgtcagagacacgtaggcccatttctgtgcattttgtaaaggttctttcaatggtagtgtagagtaacatccccattttgtaggtgccaagtgggccttgaagaactcccgaaaaactctgcactgggaaggttgagaggaagtgacaatgtggtatgctaatcctttttattttcctctctctttttctcttttattcaacatcaagcggcactgtgcagttggtagcctcaagggctggttattttcaggtgaaaacaaaagagcctacgagtgtgagcagggtctgtattggcaccattccccatttcttctttgcgttgttcacacgagcttggaagttggaacactaaaactaccaaaaacattgtttgtattggcctctaacacgttagaagtagattgatgaaatccatttttctgttttgagaggattaaagaatgtttgatatgtgattttttactgttggtagagagtgatgtgaaacgtaaaagtgacgctgctttgttcttgggcaggtggagatatacagcagatgctacgagagcgcccctctggtgattcagggcgctggagctggcaatgataccactgcagctggagttcttgctgacatacttgatctccaggatctcttccacaaaacggcttgaaatctatgtcttgtaggtcgaaccgcagagttgattgtgagtcgtgacttgtggggttcttttggtcacagtattacctaaataaatcttgagcagacatatccatttttgtactgtacgcagaaggtttttgaacaaatttggaagttggaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0128800, RefSeq:Os11g0128800