BGIOSGA026731

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Revision as of 07:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026731| Description = Japonica Group Os08g0500300 (Os08g0500300) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA026731, complete gene....")
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Gene Name

BGIOSGA026731

Description

Japonica Group Os08g0500300 (Os08g0500300) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA026731, complete gene.

LocusTag

NM_001068690.1

Ensembl Transcript ID

BGIOSGA026731-TA

Ensembl Protein ID

BGIOSGA026731-PA

Length

3754

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26338001..26341754

Sequence Coding Region

26341428..26341754,26339181..26339552,26338939..26339056,26338512..26338735,26338001..26338297

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26338001..26341754 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26338001..26341754 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCTGCCTCTCCTCCGACCTGCCTCCCCGCGCCGGCGCCGGCGCGGGAGCGTCACCCGGGTGGCCGCAGCGGTGGCGGAGGAGGAGGCAGCGGGGGGTGGAGCGGGGCGGGGCTGTTTCCGGCGGCGGCGGCGGCGTCTTCTCCATCGGCGTCGGCGGCAAGAAGCTGCACCACGGCGGCGGAGGAGGAGGGGAGATGACGGAGGAGGAGCTCGCGAAGGTCGAGGGGAGGGTGTGCGTCAACGGCGCGAGCGCGGCGGCGTGCCTGCACACGCAGCAGGGGCGGAAGGGCACCAACCAGGACGCCATGGTCGTGTGGGAGAACTTTAATACAAGTGATAGTGTCTTCTGTGGTGTGTTTGATGGTCATGGTCCATATGGTCATTTTGTTGCCAAGAAGGTCAGAGATTCTCTTCCTGTCAAAATACGCACACTATGGAAAACCAGTGCCAACGAGGACACTAGTTCCCACCAAAATGGAAGCATTTCTGGAAGTGTTAATTCAGAAGAGTCACCTGTTGTTGATGATGAATGGGGTGAATATGCTGATGACAGCGAGAAGCTTCCTGAGATGTTTCTTCCACTTAAGCAGTCTTATTTTAAGGCTTTCAAATTGATGGACAAGGAACTCAAAATGCACCCTACAGTTGATTGCTTTTGCAGTGGATCAACAGCAGTCACGTTAGTAAAACAGGGATTGGATCTTGTGGTTGGGAACCTTGGGGACTCGAGAGCAATAATGGGGACACGAGATGCTGCCAATAATCTAACTGCTGTACAACTCACAGTTGATTTGAAGCCTAACCTTCCAAGGGAAGCTGCGAGGATCCAGCAGTGTAGGGGAAGAGTTTTTGCTCTTCAGGATGAACCAGAAGTTGCCAGAGTATGGTTGCCAAATAATGACTCTCCTGGATTGGCAATGGCAAGAGCTTTTGGAGACTTCTGCCTTAAAGATTATGGTTTAATATCTGTTCCACAGATATCCTATCGTCGTCTTACTGAAAAGGATGAGTTCATAATACTGGCCACTGATGGGGTTTGGGACGTCCTCTCAAACAAGGAGGCTGTTGACATAGTAGCCGCAGCTCCATCTCGTGCAACGGCTGCCAGGGCTCTTGTCGACTGTGCTGTCAGATCATGGAGATTGAAGTTCCCAACATCCAAGAGCGATGACTGCGCTGTTGTGTGCCTATTCTTAGACCATGCAAAGTCACCTGACTTGATTCAAGAGAACGAGAGCGAGGAAGAAACTACAGAGGATGTTGCAATCCCAGACACCGTTGCTAAGGTTGACCAAGACATTGCACANAGGAGATGCACATATCTCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGSCLSSDLPPRAGAGAGASPGWPQRWRRRRQRGVERGGAVSGGGGGVFSIGVGGKKLHHGGGGGGEMTEEELAKVEGRVCVNGASAAACLHTQQGRKGTNQDAMVVWENFNTSDSVFCGVFDGHGPYGHFVAKKVRDSLPVKIRTLWKTSANEDTSSHQNGSISGSVNSEESPVVDDEWGEYADDSEKLPEMFLPLKQSYFKAFKLMDKELKMHPTVDCFCSGSTAVTLVKQGLDLVVGNLGDSRAIMGTRDAANNLTAVQLTVDLKPNLPREAARIQQCRGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPQISYRRLTEKDEFIILATDGVWDVLSNKEAVDIVAAAPSRATAARALVDCAVRSWRLKFPTSKSDDCAVVCLFLDHAKSPDLIQENESEEETTEDVAIPDTVAKVDQDIAXRRCTYLQ</aaseq>

Gene Sequence

<dnaseqindica>1..327#2203..2574#2699..2816#3020..3243#3458..3754#ATGGGCTCCTGCCTCTCCTCCGACCTGCCTCCCCGCGCCGGCGCCGGCGCGGGAGCGTCACCCGGGTGGCCGCAGCGGTGGCGGAGGAGGAGGCAGCGGGGGGTGGAGCGGGGCGGGGCTGTTTCCGGCGGCGGCGGCGGCGTCTTCTCCATCGGCGTCGGCGGCAAGAAGCTGCACCACGGCGGCGGAGGAGGAGGGGAGATGACGGAGGAGGAGCTCGCGAAGGTCGAGGGGAGGGTGTGCGTCAACGGCGCGAGCGCGGCGGCGTGCCTGCACACGCAGCAGGGGCGGAAGGGCACCAACCAGGACGCCATGGTCGTGTGGGAGGTGAGCCAGGCAGCCATGGTGGATGGCTTCTGAGTCCTCCTGATCATTGGTACTAGTAGCGTTTTCCTTCGCGTGTTGGTTCTGAAAATCTCGCCCGCCTTTTTCCTCGCCGTGTTGCTCGGTTCAGAACTTGGTGCTTGCGTTTACTCGATCTTTCCGAAGTCTTCTTTGAACTTTTTTTTTCTTCACGGTATTGGCTTTGGATCAATAGCGGATTTGAATTCGGAGTGTGTGTATATTCGATTCACAGGGAGGAGCGTTTTAGTGGAGTGCTTGATTCGAAATGTGGGATTTGACTTTATAACAGAATAAGCAAAACCTCTTCTATTTTTCTAGTTTGTTCTTCGAAACAGTTCGAGCATTTCTTGATTTGGTCTCACTGGGAGCGTCTTCTTGCTTTGTTGGATGACTTAATTCGAAATGGGAAGGATTCAGCTTTAGATTGTTTTGAGATTTAATCTGAAAACGAGGAGTTTACTGGTTCTTTTTGTATGTGAAAATTGTGGGGGGGGGGAAAGCTCACTTTTTCTGTATTATTGTAATGTTTCCTGAATCCTGATAATTTTAAAAGAAAATCTGATAAATGGGACGTGTTAGTTGGAATATTGGAGACTTGGAGTCGTCTGCTCGTGCTTGCGTTGATTCAAAACTTTCTGTATAGTCCAAGCGAGATCCTTTCCTGTGACCCTTGGCAAAAGCTTCTACCTTTCTTTGTATTCTTCTGTTAGTTTAAAGAAGAGTATGATTTTGGCTGTTTCTTCAACTAGATGCTCTTGACAGGTCAAGCGATTAGTCTGGTCTAGTAATAGCTGGCTTGGTATATTTAGCTTATATCCTAATCAACTAATCGACTCCCTTCATTTTCATGATATGTAAGCAAGTAGTTATGTTGACTCCATCACACAATTGGTGGAGTTTACCTAAAGGGAGTGGTGAAGTACAATCATGGATAATTTTCACTTTTGTTTTGGACCTACAACTAGGCAGCTAGCTAAACTTATCTAGCTACATAGGAATATCTTGTGAGCTTGTTTTAGGAAGTCAAACAAGTAAAAGCAGCCACTTTATGATATGCATGGTGATCATGCTCTTCAGAGGACAGTAAAGAGAATTTATGCCTAAAGATTCTCAGTATAATGCTATTGATTGCTAATATTCAACGAAAATAGGTAAGTACTTCTTTATTGGAGTGAGGAGTACTTGCCTTGACAAATGAGTTTGCCATGCTGGTTGGAATTGAGTTTTTATGTTTGCTGTGCCTTTTGGCTTGGGATTTATATTTTTTATATTTTTTCTTGTTTTGCCTCGCCTTCTGTTTTGAAATGTGAGTTATAACAGAAATCATATTTCTAGTCAACTTTCAACATGAATATGAAATACCCTTATAGGGACTGTTCGATGTCTTGCTAATAGAACCTCTTAGCATAGGAGTATCCTCATTTACTAAGGGTCAGTTGCAACAATTGCTAATCGCATGGAACAATGCCTTGTGAGGGTTCCATCATGGGTGATTGGATGCTAATTTGATACCTTTTCCTTGCCTAGTTGCTGACTTTATCCATCTCATTTGTGCTATTTGAGGTCTGATTATCTGATTCTATCCTATGTGCATTTCTCACATTGTTCACCCAACTACCTGTGTCTACCGTTCTTTGTGTAGGGAATACTCCATTGTGAAAATATGAGCATACTGAATAGAATCCCACAAATACAGTTTGTTAGAACCCATCTATACCCTTCAGTTTATTTTCCTGAAAAGTAATGTGCATTATCGATTTGCTTTTAAACAAATTAATTATAGACATTACCAGCTTATCACATCACTGGTACTAGGAGCGCAAACAATTATCTGACCTAGCCCTTCCATTCTTGCAGAACTTTAATACAAGTGATAGTGTCTTCTGTGGTGTGTTTGATGGTCATGGTCCATATGGTCATTTTGTTGCCAAGAAGGTCAGAGATTCTCTTCCTGTCAAAATACGCACACTATGGAAAACCAGTGCCAACGAGGACACTAGTTCCCACCAAAATGGAAGCATTTCTGGAAGTGTTAATTCAGAAGAGTCACCTGTTGTTGATGATGAATGGGGTGAATATGCTGATGACAGCGAGAAGCTTCCTGAGATGTTTCTTCCACTTAAGCAGTCTTATTTTAAGGCTTTCAAATTGATGGACAAGGAACTCAAAATGCACCCTACAGTTGATTGCTTTTGCAGTGGATCAACAGCAGTCACGTTAGTAAAACAGGTGAGGGATGCTTCTAAACTTGTTCTAGTATTCGTAGATAACTGACCAGCATTTGGAACAAAAAAAATAGTGGTAGATATTGAAATCAAAATGACAGAAGAACTGGACATGGCTTATTTTCCAGGGATTGGATCTTGTGGTTGGGAACCTTGGGGACTCGAGAGCAATAATGGGGACACGAGATGCTGCCAATAATCTAACTGCTGTACAACTCACAGTTGATTTGAAGCCTAACCTTCCAAGTATGTTCATTTCTCACTTATCATTTCAGTGGGTACCCTTGTGTTTTCAAAACTGAACTTTCTCTTTAACTGCGCATTTAGGATTTTCTTCTTTTCCTCCTAGATATGGCTTCAGTCAAACTTATTAACGCACTAAGTATAGTTACTTGTCTGGATTGGTCACTCTTTTTGGTTAATCGCTAATCTTCATATTTCTTATTTAGGGGAAGCTGCGAGGATCCAGCAGTGTAGGGGAAGAGTTTTTGCTCTTCAGGATGAACCAGAAGTTGCCAGAGTATGGTTGCCAAATAATGACTCTCCTGGATTGGCAATGGCAAGAGCTTTTGGAGACTTCTGCCTTAAAGATTATGGTTTAATATCTGTTCCACAGATATCCTATCGTCGTCTTACTGAAAAGGATGAGTTCATAATACTGGCCACTGATGGGGTATTTTTCTTATCATCTTATTACTTTCTTACTACTACTTAATATGGTGTTGAAAGTTACTAATTCCTTTTGTGAATAGAAATGCATCATGTTCTCCAATCCCTACTTAATCCATGGGGATTGGGGAATAGTTTGATTTAACATACAAAGATGTTACAGCCTTCACTCCTTCAGCTGCTTCAACTTGTAATATTGGTAAACTCAATGCATGTAGGTTTGGGACGTCCTCTCAAACAAGGAGGCTGTTGACATAGTAGCCGCAGCTCCATCTCGTGCAACGGCTGCCAGGGCTCTTGTCGACTGTGCTGTCAGATCATGGAGATTGAAGTTCCCAACATCCAAGAGCGATGACTGCGCTGTTGTGTGCCTATTCTTAGACCATGCAAAGTCACCTGACTTGATTCAAGAGAACGAGAGCGAGGAAGAAACTACAGAGGATGTTGCAATCCCAGACACCGTTGCTAAGGTTGACCAAGACATTGCACANAGGAGATGCACATATCTCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026731