Os11g0129700

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Revision as of 08:58, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0129700| Description = Similar to AP2-1 protein (Fragment)| Version = NM_001189401.1 GI:297727932 GeneID:9266656| Length = 5532 bp| Defini...")
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Gene Name

Os11g0129700

Description

Similar to AP2-1 protein (Fragment)

Version

NM_001189401.1 GI:297727932 GeneID:9266656

Length

5532 bp

Definition

Oryza sativa Japonica Group Os11g0129700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1346084..1351615

Sequence Coding Region

1349301..1349335,1349723..1349847,1349928..1350016,1350262..1350270,1350631..1350716
,1351278..1351560

Expression

GEO Profiles:Os11g0129700

Genome Context

<gbrowseImage1> name=NC_008404:1346084..1351615 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1346084..1351615 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagagatcgtctcctgatcccgcatcatcttctccatctgcatcatcctcgccgtcgtctccttcctcctcttcctccgaggattcctcttcgcccatgtcgatgccctgcaagaggagggcgaggccgaggacggacaagagcaccggcaaggccaagaggcccaagaaggagagcaaggaggtggttgatccttcttccaatggcggtggcggcggcggcggcggcaagaggagttctatctacaggggagtcaccaggtatgcgtctctgcatggcatcggtggactggcagatttgaggcccatctgtgggacaagaattgctccacttcacttcagaacaagaagaaagggaggcaagtctatttgggggcttatgatagtgaagaggcagctgctcgtgcatatgaccttgcagctcttaagtactggggtcctgagacagtgctcaatttcccactggaggaatatgagaaggagaggtcggagatggagggtgtgtcgagggaggagtacctggcctccctccgccgccggagcagcggtttctccaggggtgtctccaagtacagaggcgttgccaggcatcaccacaatgggcggtgggaggcacggatag</cdnaseq>

Protein Sequence

<aaseq>MAKRSSPDPASSSPSASSSPSSPSSSSSEDSSSPMSMPCKRRAR PRTDKSTGKAKRPKKESKEVVDPSSNGGGGGGGGKRSSIYRGVTRYASLHGIGGLADL RPICGTRIAPLHFRTRRKGGKSIWGLMIVKRQLLVHMTLQLLSTGVLRQCSISHWRNM RRRGRRWRVCRGRSTWPPSAAGAAVSPGVSPSTEALPGITTMGGGRHG</aaseq>

Gene Sequence

<dnaseqindica>2281..2315#1769..1893#1600..1688#1346..1354#900..985#56..338#gttgcctctcctcctcctcgtcacctcacctgcacctgcaccaacgcgagagatcatggcgaagagatcgtctcctgatcccgcatcatcttctccatctgcatcatcctcgccgtcgtctccttcctcctcttcctccgaggattcctcttcgcccatgtcgatgccctgcaagaggagggcgaggccgaggacggacaagagcaccggcaaggccaagaggcccaagaaggagagcaaggaggtggttgatccttcttccaatggcggtggcggcggcggcggcggcaagaggagttctatctacaggggagtcaccaggtatgcgtctctgcatggtcagttgcttccatccctctgatcccagttctgctgttctttctgatcccctcttgatttcagtcgcgaattcatcctgcattgccgctagctaatcaatggctgattttcagcccaaaattccgcatcgtttccatcatttcaggctcccgaaattatcagccgcttctttccaatctgtttctgaacatttcacttgcatgtcagagatcatgaattatttttatcgttttctgggtggtgagtctgctccccttttcatgcctcatcttttggaggttggcgagcatgatcgatcggatccatttcttgatctcataattcccatttttaatctttttttcttgctgctcctccccttggagtgagtcaattattattagctgggaagtagggagttggttggtctacatttactgctggggtggtcaactccttcagtttttcttcctcctgtaaagcaaacactaatgcttaatgctgcttatttatcaatcatcaataaattcaatatacggtggaatcatttgttgcatgcatgtatctgtatgtataaacaggcatcggtggactggcagatttgaggcccatctgtgggacaagaattgctccacttcacttcagaacaagaagaaagggaggcaaggtacattgatcgcaacatgcattagttgcctgattttttttaaggatttttaacctgaattttctctgaaaatactaaagaaagttaaatacgagtatttttacagtataatgtactataatgaaagaaaaagggaaacatacaaggtccttggtgtacttctgtatactgccaaggatcttgatacatcggccattagtacaaagcttattactataaagtggagcgaattttttaaggctgacattctgattaagctttttttatctcctttcttttttgctgttatctttgggggaccttgcccttgtgatgcgcatgtgaccttgatctgctgctgcttgatgctcctctcattagtctatttgggtaagtcccacaagctagttgtctatacacacctgttttgtcagattcatgctgcatgttgcttcctgttcttgtataatcttagatttcctttgtttgatctgtcacatccttggtttgtctcaatatgaaaacagtttatccctaagaatataggcatatagcaactagttgttacataactacttaatgttttggtgtttggtctgtttctgaacattagtgcaatgtttaatgatgtttaggggcttatgatagtgaagaggcagctgctcgtgcatatgaccttgcagctcttaagtactggggtcctgagacagtgctcaatttcccagtaagtttgccaacttaccactagacaattgcgacttgtgtaatctgaattattactgaagataatgcgaattattgcagctggaggaatatgagaaggagaggtcggagatggagggtgtgtcgagggaggagtacctggcctccctccgccgccggagcagcggtttctccaggggtgtctccaagtacagaggcgttgccaggtaggactactgattaattaactctaattaatctctctctctctctctcttgacctgaatgatgagtcagcatagcattgctagctagggtggcattcatcagctggcaacgtcatttgccagccgtgtatgctctgcatgcatgctccatggtccatggcctcttctttcttgtgtcagtttcgtgcaatgtcatgcatgcatctaggaaaagtcagaactgcaaaagttttaagcttctctctttcttgatgaaatctgcttccaatatcagttactgtattgtggtgccagtgctaccaacttgctgtttccattttgttcagagctagcagctgtctgttagtaattcatttctgaactttttttttgtctggttttgttcaggcatcaccacaatgggcggtgggaggcacggatagggcgggtcctggggaacaagtacctctacctgggtactttcggtacgtattctttcatccaatctttcatgctctttgctcttctttcttggagcccacttaccttaatcaaatgttgattactagcattgacaagccgctcttgtttgttggagaatttgcctgctgtaagccggccacctaacttttaccaaaatttatgatggttgatcaacccatctgcgaaattaaatggcgtgtttttcttgtttcccttcgatgtagatttgaccccttgcttttcttgaggattgcttactaggtagtacttcctctgtctcaaaattgagacagttttagatttcaatataattttcgggatgctactttgaacaataatatttataaaaacaagttatcttaaatgaaagagttgcatattatgatactagtttgagtaaatttcataaaactgcagatattttgtacaatctatcacaaaactacagatttaagaacttgttttacaaaaatacagattcagtggcttcgtttatcacaaaactacaggtactttgggcaatatatcacaaaactaaagatttaagtacttgtttcacaaaactacagatttaatatcttcatttatcacaaaactacaagtttaatggcttcatcatcacaaaactacaagttttagcattgttaaaacttgtagttttgtgataatggagacactaaatctgtagttttgtgataaatgaagacactaaatgtatagttttgtgataaacgaatacactaaatctatagttttgtgaaacaagttcttaaatctgtagttttgtgatagattgtacaaactacctgtagttttgtgataaacggagacactaaatctgtagttttgtgagacaagcttttaaatatgtagttttgtaataaattgtgcaaaatacctgtagttttatgaaatttactctataatctggtaacattattcttacgtgattgctctttttaatttttcattattaatagttaaagttaaaaatgttgatttaggactattctaaaaatgcttatattttagaacagagatagtagtatatattattctccttgtatgtttttgaaccacaaactctccattttactataaattaagtgagctggtgatatcactgatatggaagcatagtgttgaaacttccttttcttttacttaaaaaaatcagaaaatattttcctgctgtcaagatcaaagaccatgagaccaagataccatcctgtatgcaatccccagaagactgcccaatttgccctagaaatagcataaaaacaagccccatgtcttgatcaccaccatgtcctaattactagacaaaatcctagtatagatacattatatggtacatgacttggaaatgcatgtgacaagcacgtgagtggtgctgcaatgccagtagtaaaaaccagatggtgcatagggatcttcaattgttcatcactgccggctctttccactagagctagctgagtgagtcagcagccagttgcaagtgctcacttcacgtgcatggagaatgccctactaggctattaccccccctgtgccaaactagatcaagattcaagatccagaaccacacagatggattcatcactactttcatcacaactaaagaaagaaaaaaagggaaagtgaacagtgttcaccgattactagtaaacagaaggttgccagcacagttctagttaccaacaatgtgggaaaagtcatgccagatctcagatggtgtccagcacatgtcaaactagaaagtgaaaaaaaatgtgaatatgggatgcaattcagcatctctcagtattaagatccaatgcattcattttctaaagtcttaaatctatacagcatgacctgatcaattctgtaatgccaatgttactagaagtattcatgactcctagtagtactaagttgccccaaagattcagtgtctcaccagaaaatttgttctcatttcaacaaacgtacctctttttacagatactcaagaggaggcagccaaggcctatgatcttgctgcaattgaataccgaggtgccaatgcggtaaccaacttcgacatcagctgctacctggaccagccacagttactggcacagctgcaacaggaaccacagttactggcacaactgcaacaagagctacaggtggtgccagcattacatgaagagcctcaagatgatgaccgaagtgagaatgcagtccaagagctcagttccagtgaagcaaatacatcaagtgacaacaatgagccacttgcagccgatgacagcgctgaatgcatgaatgaaccccttccaattgttgatggcattgaagaaagcctctggagcccttgcttggattatgaattggatacaatgcctggggcttacttcagcaactcgatgaatttcagtgaatggttcaatgatgaggctttcgaaggcggcatggagtacctatttgaagggtgctccagtataactgaaggcggcaacagcatggataactcaggtgtgacagaatacaatttgtttgaggaatgcaatatgttggagaaggacatttcagattttttagacaaggacatttcagattttttagataaggacatttcaatttcagatagggagcgaatatctcctcaagcaaacaatatctcctgccctcaaaaaatgatcagtgtgtgcaactgattctctctgtgtgtgtgtttctgggtgttgaaaatcttgagatatacagggaagttttcaggtttttatcttggggtatatttctctgtccaatggcactgccacaaagaagcaaagcttctgtaggcgttctgttcaggtggggaagattcatatgcttctccctatggtcctagtctcctagaaacccaaaggcattcaacttggcatgagacaagtgtctgtgttccttttcttgtaatacccccaaggctgattgattaactagggagacaattttctcccttaccctagattgagctagttaattctgattactcagaatcttgaatgcttgagtagtactataggtattcccacaagaaaactctgggtagttcacagttttataaggtaatggagcatatgttatacagaaatcacaatatgtaaatctatctaactttcagaataaactatactatacatcttggttgaggcatgaatgcat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0129700, RefSeq:Os11g0129700