BGIOSGA026778

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Revision as of 07:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026778| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026778, complete gene.| tag = OsI_296...")
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Gene Name

BGIOSGA026778

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026778, complete gene.

LocusTag

OsI_29649

Ensembl Transcript ID

BGIOSGA026778-TA

Ensembl Protein ID

BGIOSGA026778-PA

Length

7072

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25558587..25565658

Sequence Coding Region

25565407..25565658,25565062..25565150,25564352..25564418,25564147..25564262,25563314..25563380
,25563055..25563103,25562778..25562863,25562325..25562578,25562184..25562239
,25561729..25561814,25560760..25560852,25560023..25560164,25559798..25559956
,25559221..25559654,25558848..25559076,25558587..25558780

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25558587..25565658 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25558587..25565658 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATAGCGTCGAGGACGCCCGTCTCGCTCCACAGCCTCCTCGTCGCCGGCGGCCACGGAAAGCGATGCGTCGCCGGCGCCGGCGGCAGGAAGCGCGGCCGGGTGCAGCGCCGCCACCTCACGCAGGCGCTCGAGAGCTTCTGGAGGCACGCTCCCCGCCCCGCTCCTCCCGCCGCCGCTGCCCGCGGCGAGGCCAACCGCTCGTGGCAGCCGCCACCCCTCGAGAACCCTGCCTTTGAGGAGTATTACAAGGAGCAACGAATTGTTCGCGAGGAGGAGTGGGATGACTTCATCAGTGTGCTGCGGAAACCATTGCCAGCGACTTTTAGGATCAATGCCAGCTCCCAGTTTTTTAAGGATATTTGCTCAAAGTTAGAGAATGACTTCAAGAGATATTTGGAGAGTGAGGTTAGTGATGAGTATGGAGAAGATGCTATCAGGCCCTTGCCTTGGTATCCAGGGAATCTTGCATGGCATTTGAACTTCTCTCGAAAGCAACTGAGGAAAAATCAAGCTCTTGAGAGTTTCCATGAGTTTTTGAAACATGAGAGTGAGGTTGGTAATATAACCAGACAGGAGGCTGTTAGCATGGTGCCACCATTGTTTCTGAATATACAACCTGATCACCATGTTCTTGACATGTGTGCAGCACCAGGCTCTAAAACTTTCCAGTTACTTGAGATGATTCACCAATCAAAAGAGCCAGGTTTACTTCCGAGAGCACTGGTGGTAGCTAATGATGTCAACGCGCAAAGATGTGACCTCCTTATCCACAATATGAAGAGAATGTGCACAGCCAACCTGATAGTGACAAACCATGAAGCGCAAAACTTCCCTGATTGCCGTATTGCAAATGACCTTTCAGAAATTTATAAAAAAGACTGCAAACCTCAAAGATTAGAATTTGATCGGGTACTTTGTGATGTCCCCTGTAGTGGTGATGGAACTATCCGCAAGGGTCATGACATGTGGAGAAAGTGGAACTCAGGCATGGGGAATGGACTTCATCTTCTCCAAGTAGATATTTCTATGCGTGGCATTGCCTTACTTAAAGTGGGTGGAAGGATGGTTTACTCAACTTGCTCAATGAATCCTGTTGAAAATGAAGCTGTTATAGCTGAGCTTCTTCGGAGAAGTGGAAATTCTGTCGAGCTTCTTGATGTTTCTAATGAGCTACCAGAATTGGTCCACCGTCCTGGACTTAGCACTTGGAAGGTTCAAGATAAAGGATCTTGGTTTCAGAATCATGACGATGTCCCTTGTGATAGGAAGAATGTAATATTACCAAGCATGTTTCCGTCAAATAATAGCATCCAGGAAGGGCAATCTGTGTGTGATGACATTGAAGTCAACACAGATGGAATTTCAAATAGCAACACCACCAAACATTCTGACTCTACTCCCAACAGTACAAGCTCAAATTTTCCTCTGCATCGTTGCATGAGAATTGTTCCTCACGACCAAGACAGTGGGGCATTTTTCATTGCAGTTCTCCATAAACTGTCCCCGTTGCACGAGTGCCAGATGGTGGAGGTGACAAAAACCGAAGTTCTTGATGATGATGAATCGCTTGAAGAACAGAAAAAAATTAGCATAGATGCTCATACTTCAGAAGATAGCAACTTAACTGAAGTTGCTTTGGTTACTGATGATGTAAAAAATGATCAAGCTGAATCAGGGAATAGAATGAATAAGTTGCAAGACCAATGCAAGTGGAAAGGGGTTGATCCTGTATTATTTTTCAGAGATCTAACGGTGATTAAAAGTATTGTATCGTTCTTTGCGATCAATATATCTTTTCCACTTGAAGGTCATCTGGTAACTAGAAGTGCCGATCCTAATAATGCAAGGAGGATATACTATGTATCAAAATCAGTCCAAGAAATTTTGCAACTGAACGTAGAAGTTGGAGAGCAGCTTAAGATTGCATCTCTTGGCCTCAAAATGTTTGAAACACACCGATCAAAGGATGGTTGTCCATGTGCATATAGGCTATCGTACGAGGGCTTGCCATTGCTGCTTCCATACATCAGCAAGCGGATACTCTGTGCATCTCCAAACGATTTCCTGCGCCTTTTACAGTACAGGACCGTTAATTTTGCTCACTTTATTAATGCCAGATTTGGGGAGGAAGCTGCATCATTGATACCTGGTTGCTGTGTTGTAATCTTACGTGAAGGTCATCAGAACCTAGATTTAGGTTCTATAACCATGGATCCCACCACAATTGCCATCGTTTGCTGGAGAGGCAAGGCAACACTGAACGCCATGGTTTCTCCACCTGATCGGAAGGAGCTGCTTGAGAGGATCACACAACGCTTCGGGCTCAAAGCATTGAGAGTGGAGGAAGAGAACCCCCGACGGCAAAATTAA</cdnaseq>

Protein Sequence

<aaseq>MIASRTPVSLHSLLVAGGHGKRCVAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEEYYKEQRIVREEEWDDFISVLRKPLPATFRINASSQFFKDICSKLENDFKRYLESEVSDEYGEDAIRPLPWYPGNLAWHLNFSRKQLRKNQALESFHEFLKHESEVGNITRQEAVSMVPPLFLNIQPDHHVLDMCAAPGSKTFQLLEMIHQSKEPGLLPRALVVANDVNAQRCDLLIHNMKRMCTANLIVTNHEAQNFPDCRIANDLSEIYKKDCKPQRLEFDRVLCDVPCSGDGTIRKGHDMWRKWNSGMGNGLHLLQVDISMRGIALLKVGGRMVYSTCSMNPVENEAVIAELLRRSGNSVELLDVSNELPELVHRPGLSTWKVQDKGSWFQNHDDVPCDRKNVILPSMFPSNNSIQEGQSVCDDIEVNTDGISNSNTTKHSDSTPNSTSSNFPLHRCMRIVPHDQDSGAFFIAVLHKLSPLHECQMVEVTKTEVLDDDESLEEQKKISIDAHTSEDSNLTEVALVTDDVKNDQAESGNRMNKLQDQCKWKGVDPVLFFRDLTVIKSIVSFFAINISFPLEGHLVTRSADPNNARRIYYVSKSVQEILQLNVEVGEQLKIASLGLKMFETHRSKDGCPCAYRLSYEGLPLLLPYISKRILCASPNDFLRLLQYRTVNFAHFINARFGEEAASLIPGCCVVILREGHQNLDLGSITMDPTTIAIVCWRGKATLNAMVSPPDRKELLERITQRFGLKALRVEEENPRRQN</aaseq>

Gene Sequence

<dnaseqindica>1..252#509..597#1241..1307#1397..1512#2279..2345#2556..2604#2796..2881#3081..3334#3420..3475#3845..3930#4807..4899#5495..5636#5703..5861#6005..6438#6583..6811#6879..7072#ATGATAGCGTCGAGGACGCCCGTCTCGCTCCACAGCCTCCTCGTCGCCGGCGGCCACGGAAAGCGATGCGTCGCCGGCGCCGGCGGCAGGAAGCGCGGCCGGGTGCAGCGCCGCCACCTCACGCAGGCGCTCGAGAGCTTCTGGAGGCACGCTCCCCGCCCCGCTCCTCCCGCCGCCGCTGCCCGCGGCGAGGCCAACCGCTCGTGGCAGCCGCCACCCCTCGAGAACCCTGCCTTTGAGGAGTATTACAAGGTGAGAATGATTGCTCGCTTTAGCCATAGGTTGGCCCGTGCCTATCGGTTTGGGGAGATTTGAGGTGAACCGGACTCTGCGCGCGATTTTTGATTGAAACATGGCGGTGGTTGCCTAATTGTTTAGTTTCAGTGCTGTTCTTCGGTGTGCTGCTTTGTAGGCGATATGCTGTGTTTTTTGCTGTAATGCTGCTTACAGAAAGTATGTGGGTGGAAATGTTGGTGCATCATGCATGTTCATGGCTGTGCCTTTGCAGGAGCAACGAATTGTTCGCGAGGAGGAGTGGGATGACTTCATCAGTGTGCTGCGGAAACCATTGCCAGCGACTTTTAGGATCAATGCCAGGTGATGCTGGTTGCTCTGGAATGAAACAATGCGACTTGCAGCTTCGGTGTTCATTTCATTATCTCATTCATTTGGTTTGCTAAACCTGCGTTGATGAGATAAATACAATTTTAGTTTGATATGCAATCATCCACTCATCCCCATTTTTTTCCTCCTGTTTTCTCATTGCTGACCATGAGTAGCATATGGCTGTCAAATTCTCAAGGAGGTTCCTGCTTCATGATCAGACTGTATCTTGCTTTACCTTCCATTCACATGCAACTATGCAAGGGGTTCATTGTGTATCTTCACCAGGACAACATGAATTCTGATTTCGTAACCGATAAGAGTTACTGATGGGTGCAAACTGTCACGCTAGTTTGCCACTCCAGAACTCATGTAGTTTTAGTCTATTTGTAATACCTGTTACCTTTTATGATCTGAATTCTCTCAAGAATGTAAGGAACATACTGTGCCGTTAGTGGCTTACAGCAAATTAGCTTTTTATTAGTAAATGTTGTGCTGTTTTCACAAAGAGTAATTTGCTTTTTACTTATATATGATAGTATGGCACAATAGTAGTCTAGAATCTAAATTTATTCTCGATCACCTTCTGGTCTTTTTCCGGAGTAGCTGAAAGTTTGTATTCTTTTAATCTTTTCAGCTCCCAGTTTTTTAAGGATATTTGCTCAAAGTTAGAGAATGACTTCAAGAGATATTTGGAGAGTGAGGTTGCCACCCTCTTTATTTACACACTTTACTTAAACACCAGTTCCTGCCATTCTAATGTATTTTTTATAAAAATAAATTACTTGCAAAGGTTAGTGATGAGTATGGAGAAGATGCTATCAGGCCCTTGCCTTGGTATCCAGGGAATCTTGCATGGCATTTGAACTTCTCTCGAAAGCAACTGAGGAAAAATCAAGCTCTTGAGAGGTAATTACATCTAATCATGTTTATAAGAATTCTTGTCTATGGCATGTAATGTTTTTTGCTGTCTGCCTACATGTCAAAGTCTGTATATGCCAAATACACCGCTTCAAATTTTGCAATCTTTTCACCAGAAAGGAAAGAAACAAAGCTGCATGGAAAATCTAGTAAACAATATCTGAAGTCTCATTTATGTTTGCAACATGTGTATGCTATTCTTGTAGTATGCAATGGTCTATTTTATGCCTTATGCCCTTACCTTAAACTCTTTCATTTATAGTCCGTGTAACATGTGGTATCTTTCATTTGGACTTCTCAACCTCATATTCTTTTACATGGATTCAGTTTTCATTTCTTACTATGGCATTTTAATGCTGAAATTTTTATGAGTTTCAAGAGTACTGGCTGTGAGTAATTTTTCAGAACATTAGCCACCCTTTCTTGTGTAATAAACAACGGTTCTTGTGGAACTCTGGAAGCTAGGGAATGGTTTAGTTGCATCGCTTGTCATGCCATGCAACCAGTCGTCACCAACTTATTTTACTTTGCTCTCTTTTCTACTCTTTCTCTCTCAAATTGTTGTTATACTTAGTGATGTGTCCAAGCTGTCTAGAATTGTTGCTGTTGATTCTTTACATGTTTGTGTTCAATAAGAAGAGAGAATTAGGATGCTCATCGCTGGGTGCTCATCACTAAGTAATTAACTCTGTTGCAACCTTGATGTAAATCTTGGTTAGGCTACGCTTTTGATTCATTGTTTTTTTCGTTGCAGTTTCCATGAGTTTTTGAAACATGAGAGTGAGGTTGGTAATATAACCAGACAGGAGGCTGTTAGCATGGTGGGTACCACTTCCCAATTCGCTTGAGAATTATGTCTCAGATGCTTTTATTTTATAAATCCTGCATTATCGATGTAGGTTCCTGAAATGTCCTGCAAGCTGATGGTTTTGTCAAATTAGCTTTAGTTTTTTCTTTAACATTTACTCATTTTAATATCTCTTGATATCTTATATTAATCCTTGTTTTAATAAATGAATTGATTCCTGCAGGTGCCACCATTGTTTCTGAATATACAACCTGATCACCATGTTCTTGACAGTATGTTACTGTAATACTGCATAGCTTCTATCCATTATCTTAAACATTCCATGTGCTCATAGTTTGATAGTAGTCAACTCCGTGTCAAAATGTCAGTGGATGCTGGATGGGTTTGATTGGAATTTTGGAAGACAAAAGAGTCCTTCAGTGTAGTAACATAGGCCTGACCAATTTTTATGCATCTTGTACAGTGTGTGCAGCACCAGGCTCTAAAACTTTCCAGTTACTTGAGATGATTCACCAATCAAAAGAGCCAGGTTTACTTCCGAGAGCACTGGTACATTTCTTCGTTTGGTAAATACAGCATTCAACTATGTTCTCATAACTTCTACGGGTTTGCAGAAAAGAAACTTAGCTATATTATTTTTGCTGACTACTTTGTAAAGCTAATACGACTCCTATTGTTATTACTCCCACTGATATCAGAAATGAAAACTGACCTTAGATATCTTTTCTCTCCACGAGAGTGTGGTTAGGTGGTAGCTAATGATGTCAACGCGCAAAGATGTGACCTCCTTATCCACAATATGAAGAGAATGTGCACAGCCAACCTGATAGTGACAAACCATGAAGCGCAAAACTTCCCTGATTGCCGTATTGCAAATGACCTTTCAGAAATTTATAAAAAAGACTGCAAACCTCAAAGATTAGAATTTGATCGGGTACTTTGTGATGTCCCCTGTAGTGGTGATGGAACTATCCGCAAGGGTCATGACATGTGGAGAAAGTGGTTAGCACTGAACCTTCTATTCTGTCTGCTGCTGTTATTTCCCCACTCTTTTTTCCTCAGGACCACAATCTGTTCTGCTGTTCAGGAACTCAGGCATGGGGAATGGACTTCATCTTCTCCAAGTAGATATTTCTATGCGTGGTAAAAATTTGGAACATCCCTAACACTACTAAGTGCATAATTGAATCTTGGTATTTGGTATCATGGGAGAATGAGATGTTATGATGTTCTCTTTGCAACTGAGCTAGCACCCATGAATCTTTTATGAATCAGATGGCCTTTGTTATTAACTGTTTCATAAATGTGAGCATATGCAGTATAGCACCCTACTACTTAGGACCTTTTGCAAAGTTCCTCCAGAGAAGAGAACACATAAACCATCAGTCCATCATATTGCCAATGCGAATATTATTTTATTTGGTTTGAATCCCTTTTGTGATTGAAATATATATTAGTTGAAAGTTCTGTGATTTATTATCCAGAGTATCAAACCTAGAATTTTCTCTTCAGGCATTGCCTTACTTAAAGTGGGTGGAAGGATGGTTTACTCAACTTGCTCAATGAATCCTGTTGAAAATGAAGCTGTTATAGCTGAGGTATTTATTACTTCGTACTCCGAAGTTACATTTTCTGCATTATAGCATATTAGCATTTACCATTGAGCTGTTGAACATGAAGTTGTTATTGTGAACATATTGTAGACTGGCAATGAGCTAATCTCTGCGTACTTTAGGACCCACTGGAGCAGTTTTGGTTTGCGTTCTTAGTTGCCTTGTTGGGCTTATATCACAACAAATTAGTATACTAAGGAAGCTCATTGAATAAGCCTAAGCCATGTGATCTTTTCAAGCTCACTAGTCCAGATATAGCATAGTGGCTGCTTAAGCATTTAACACAAACACAAGGCCCTTCTGGAATACCTCATTAGATGGTTCCCTGGTAATACAGTCAACAGTTCATCATTATTCGTTATTTTTCAATACCAAAGACAACAGCTTTCGTGCTGATCACTTGGAGCAGTTGACTATTTATGGTGACTTGGTCAGGAATTTATGGTGTATGTGGCCAAATTAGCTATGCAGTGTAGTACCCCCCTCTGTGGCTCCGTCCCCAAAGGGCTCCATTTTTTTGCTACCAACTTGGACAAGTGTTGTCCAGGTTCGTAACCAAAAATGGACTCCTTTTGGGACAGATGTTGTAGTATTTAATGAAGGGAGAGAAATATTACTGAGGAATATTAATTTTATTAGAGATGAAATGACTACTTAAACTGTTAAAGATCAGGGCCTAGCTTGTGCCCTGGCTGTTTTGTGGGTACCAGTTTTTTACTGTATATTATTATTATATTTTTCTTAATTGATTTTAAGATTTTTTTTCCAAACCTTTACTACTACATGCACATTCTTTTCTTAATTTATGTTCCATATGTAAATTCTCACTGTGAACTGTTTATATTTCTCATAATCATGCAGCTTCTTCGGAGAAGTGGAAATTCTGTCGAGCTTCTTGATGTTTCTAATGAGCTACCAGAATTGGTCCACCGTCCTGGACTTAGCACTTGGAAGGTACTTTGTGCACATTTCTATATCATTCCCTACCTCCTGATTACCCTCTCCTTTTTTGTATGTGTTCAGTTTTCTTGGTATGTTTCATGGGTATAGACATGTGTCTGGATTTTCGCATGTTTTGCAGCCTTCCTGATTACCTTCACCAATAAGTACTTCACCTGCTGAATACCATCTGCATTCTCTGTATGGTTCTAATGCCCATATATACCTATGGATGATAACGCGTATGGTGTTCAGGCACTTGTGGACATCTTATCACTAAAATGAAAATAACTTCAACTTGCCATGAATGTGTCGGTACAACTTGCCATGCCTATATTCTTTGACTTGGTAATAGGATGGTCTTAATTTGTGGTCAACTGGTCATTGACTAAATAGGTAAGGAGTAAGTTAAGAATGAAGAGGGAGTGCCTCGATTTTGTTATTAGTTTTTTGTTTGCAGAATATGATACTTCTACATTCTAGTTTTCCGCTGTAGTGTTCAGTTGAGCGTTTGTTCTACATTGTATGTTAGATAATCAAAGTGGTCAAACTTTGTTGTTTTATTCTGCCTGCCCAAGCTCCCAATGGAATCATTTTGCAACTCATGCAGGTTCAAGATAAAGGATCTTGGTTTCAGAATCATGACGATGTCCCTTGTGATAGGAAGAATGTAATATTACCAAGCATGTTTCCGTCAAATAATAGCATCCAGGAAGGGCAATCTGTGTGTGATGACATTGAAGTCAACACAGGTAGCAATGGAAGCTTCTCAAGAAACTTCAGCATTGAAAAAACCAACAAAGTTTATTGTGATACAGATGGAATTTCAAATAGCAACACCACCAAACATTCTGACTCTACTCCCAACAGTACAAGCTCAAATTTTCCTCTGCATCGTTGCATGAGAATTGTTCCTCACGACCAAGACAGTGGGGCATTTTTCATTGCAGTTCTCCATAAACTGTCCCCGTTGCACGGTAACATCCTCTTTAGTTACTTTCCCACAAGTTTATTTCAAACATTTCATGAACATTTGCATACATACATTCTGATCTGATTTGCTGTTGTGCAAGCTGTTAATAGCGTCAATATGTTTCATGTGCTCTTAACATTCTTTCAGAGTGCCAGATGGTGGAGGTGACAAAAACCGAAGTTCTTGATGATGATGAATCGCTTGAAGAACAGAAAAAAATTAGCATAGATGCTCATACTTCAGAAGATAGCAACTTAACTGAAGTTGCTTTGGTTACTGATGATGTAAAAAATGATCAAGCTGAATCAGGGAATAGAATGAATAAGTTGCAAGACCAATGCAAGTGGAAAGGGGTTGATCCTGTATTATTTTTCAGAGATCTAACGGTGATTAAAAGTATTGTATCGTTCTTTGCGATCAATATATCTTTTCCACTTGAAGGTCATCTGGTAACTAGAAGTGCCGATCCTAATAATGCAAGGAGGATATACTATGTATCAAAATCAGTCCAAGAAATTTTGCAACTGAACGTAGAAGTTGGAGAGCAGCTTAAGATTGCATCTCTTGGCCTCAAAATGTTTGTAAGTGCTCTAACCAGAACTTACTGTTCACTCAATCAGCTCTTTTCAGGAATCTGCATTTTGTAGAATCAGAGGGAGGATATGCATTTTTTTAACCTCAATGAGCTTACTCTAATAGTACTCTCTTTCTATGTTCTCACTCAGGAAACACACCGATCAAAGGATGGTTGTCCATGTGCATATAGGCTATCGTACGAGGGCTTGCCATTGCTGCTTCCATACATCAGCAAGCGGATACTCTGTGCATCTCCAAACGATTTCCTGCGCCTTTTACAGTACAGGACCGTTAATTTTGCTCACTTTATTAATGCCAGATTTGGGGAGGAAGCTGCATCATTGATACCTGGTTGCTGTGTTGTAATCTTACGTGAAGGTAACGTTACTCCATATGAAAGTCTAAAAGAGATTGTGTGATAATGTAAATCTTGTTAATATTGCAGGTCATCAGAACCTAGATTTAGGTTCTATAACCATGGATCCCACCACAATTGCCATCGTTTGCTGGAGAGGCAAGGCAACACTGAACGCCATGGTTTCTCCACCTGATCGGAAGGAGCTGCTTGAGAGGATCACACAACGCTTCGGGCTCAAAGCATTGAGAGTGGAGGAAGAGAACCCCCGACGGCAAAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026778