BGIOSGA026816

From RiceWiki
Revision as of 07:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026816| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026816, complete gene.| tag = OsI_295...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026816, complete gene.

LocusTag

OsI_29592

Ensembl Transcript ID

BGIOSGA026816-TA

Ensembl Protein ID

BGIOSGA026816-PA

Length

3523

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25045920..25049442

Sequence Coding Region

25049158..25049442,25048077..25048127,25047885..25047995,25047602..25047733,25047384..25047520
,25046462..25046574,25045920..25046146

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25045920..25049442 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25045920..25049442 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCACGTGCCTGCCTCCTCCGCCGCGCGCCGCCATCGCCGCCGTCCTCACCTCGCTACTACCACCGCCACCGGGCGCCTCCGCGTCCCTCGCTCCCGCCGGCCCCGCCGCCGCCGTCGCCCGTCAGATCCGCCGGAACGACGGGCACCACCCGGGGGCAGCGGTAGGGATGTCGTCCGCGTCCGTGGCGGAGAGGGAGAGGGAGAGCGAGGCTGGGGAGTTCACCGAGGTCGTGGTGGTGCGGCACGGGGAGACCGCCTGGAACGCCTCGCGCATCATCCAGGGGCACCTGGATGTAGAACTGAATGAGATTGGAAGACAACAAGCTGTTGCGGTTGCACGGCGTCTTTCTAATGAAGCCAAGCCAGCTGCGATATATTCATCTGATCTGAAGCGAGCGGCAGAGACTGCAGAAATAATAGCAAAAGCTTGCAGTTTGCCAAATGTTGTGTTTGATCCAGCACTGAGAGAGAGACACATCGGAGATCTGCAGGGCTTAAAGTATGAAGATGCTGGCAAAGAAAAGCCAGAGGCTTACAGAGCATTTTTGTCGCACAAGAGGAACCGACAAATTCCTGGTTTAGGGTTCACCGGGGAAGGAGCAGTGGGGGATCTATGGGGGCTAGACGACTGGAGGGAAACTAGGCTTGAGGTAGCTAATGGGAGGGGATCGTGGATGAAGGGCGACAGTGGCGATGGCGGGGGTTGCTGGTGTAGCTTCTCTTACAAGAATTTTGGGCTTGTTTTTCAGGGTGGTGGAGAAAGTCTTGATCAACTATCAGAGCGATGTGTCTCTTGCTTGTACAACATAGTCGAGAAACATCAAGGGGAGCGAATAATCTTGGTCTCGCACGGTGGAACCATCAGAGAACTCTACAGGCATGCCAGTCCAATGAAGCCTCTTCACGGTAAGATACACAACACATCCGTAAGCGTAATCCTTGTGTCTGGTGCCACTGGGCGTTGCATTGTCAAGGCGTGCGGGGACATCAGCCACCTTAAGGAAACCGGTGTTCTGGAAAATGCCTTTGGTGGCGATAAGAACTCTGCATAA</cdnaseq>

Protein Sequence

<aaseq>MPTCLPPPPRAAIAAVLTSLLPPPPGASASLAPAGPAAAVARQIRRNDGHHPGAAVGMSSASVAERERESEAGEFTEVVVVRHGETAWNASRIIQGHLDVELNEIGRQQAVAVARRLSNEAKPAAIYSSDLKRAAETAEIIAKACSLPNVVFDPALRERHIGDLQGLKYEDAGKEKPEAYRAFLSHKRNRQIPGLGFTGEGAVGDLWGLDDWRETRLEVANGRGSWMKGDSGDGGGCWCSFSYKNFGLVFQGGGESLDQLSERCVSCLYNIVEKHQGERIILVSHGGTIRELYRHASPMKPLHGKIHNTSVSVILVSGATGRCIVKACGDISHLKETGVLENAFGGDKNSA</aaseq>

Gene Sequence

<dnaseqindica>1..285#1316..1366#1448..1558#1710..1841#1923..2059#2869..2981#3297..3523#ATGCCCACGTGCCTGCCTCCTCCGCCGCGCGCCGCCATCGCCGCCGTCCTCACCTCGCTACTACCACCGCCACCGGGCGCCTCCGCGTCCCTCGCTCCCGCCGGCCCCGCCGCCGCCGTCGCCCGTCAGATCCGCCGGAACGACGGGCACCACCCGGGGGCAGCGGTAGGGATGTCGTCCGCGTCCGTGGCGGAGAGGGAGAGGGAGAGCGAGGCTGGGGAGTTCACCGAGGTCGTGGTGGTGCGGCACGGGGAGACCGCCTGGAACGCCTCGCGCATCATCCAGGTTCCGTGCTCTGTTCCTCCCGCCCCGAGCCCCATCTATTTCTCTGAAGCTTTGGTCTTCAACTTTGGGGAAAAGCTTTGGTTGGGAAAATTGGGAAGAATAAATGATAGTTTGGTGGTACACTTGTTTCTAGTTCTTTGATCATTCAGTGCTCAGACTTTACAATGCTCCGGTGTACCTTAGACAATGCTCCGGAGTAATACAGACTAGTTGGCTTTACTATCTAATCTAACCCAAAATAGTTTGACAAAGAACTTGTCTTGATAAGGACGATATATCGTATACAAGGGCTCACAAGTCGGACAAAATGGATGTTTTCTCAAGTGATGCCATGCAGAATTTGATGAAAGTATGTTGGTATTTAGAAAGTTCTTTTAATTTGCTGAACGGATTTTGATTGATTGATTGCACCCGTTACATAAGAGGTCTTGTTTTTCTTTTGTTTTCAGCATGAAACCCTTAATGTGGTACTCCCCTAATTAAATTGTTCCAGTGACTGTTTATTCACTCCCCTAATCTTAATGGATTGATATGATTTTCTCGTATAATAAAGTTTATAAAGTTGAAGTGAAAAATGTTAAATGTTAAAGTAATGCAATTCCCTTATTCCTTTTATAGAAATTTACAGTTTGCAATATGTGCTTCATCACATGGTCTGAACTCGTAGTTGTTTACTAAAGTACTAGGAAAATTCCCTCGTACATCTGCTGTTGTAAGAACAGTTTCTATAACAGAAGTTATGCAATGCAAAAACTTTAAGAGATGATAGCCAGTAAGGTTTTATGGCTGTCGATAAACTTATGCTATGACTCGCCGTAGTGGATTGTCAGATAGCTATGGTTACACATTACCTGACTATATCTGATGTGTAATATGGAACAAAGTATGGTAAAGGCATTTCATGATATGATTACCAACATTACCTTGTCTTTGCGCATTAACTAACCATGTCTTATTAATAAGTTTATTTTATCACACTTATAGTTTCTTACTGCCTTTCAACTGATATAGAACCAAAATCCTGTATTAGGGGCACCTGGATGTAGAACTGAATGAGATTGGAAGACAACAAGCTGTTGCGGTATAGTATGACATATTTCAGATTGCCGTAAGACATTTGGAGTGGTGTGTCTTATGTGGAACTTGTTGACTTTAATGCAAGGTTGCACGGCGTCTTTCTAATGAAGCCAAGCCAGCTGCGATATATTCATCTGATCTGAAGCGAGCGGCAGAGACTGCAGAAATAATAGCAAAAGCTTGCAGTTTGCCAAATGTTTGTCCATTCAACTCATGCACTTTTCTATTTTTTAAATATCTCAGGCTGACTATCTACGCTGCTTCAGTTACGCATAATGTATTGTTTGTAGAAGACTAGAAGATCAATTGGTCATTGATTACTAATGTAGAAACTGTCTGCATCATAGGTTGTGTTTGATCCAGCACTGAGAGAGAGACACATCGGAGATCTGCAGGGCTTAAAGTATGAAGATGCTGGCAAAGAAAAGCCAGAGGCTTACAGAGCATTTTTGTCGCACAAGAGGAACCGACAAATTCCTGTAAGCACTCCATTGTCTTACTTTTTATAACACATCAGTATTGATTCAGCAAACAGATTATGCTTCTGATACCATACATAGGGTTTAGGGTTCACCGGGGAAGGAGCAGTGGGGGATCTATGGGGGCTAGACGACTGGAGGGAAACTAGGCTTGAGGTAGCTAATGGGAGGGGATCGTGGATGAAGGGCGACAGTGGCGATGGCGGGGGTTGCTGGTGGTGAGGGTGGGTGTCGGGGCTTAGTGAGCTAGCCATCCACAACTGAACATCCCTAGCTTGGTGGAACATATCGGAAAGACCATGACGACCATGTATGGGAAGACCATACATAGGTGGTATGTTTGTCAATTGCTGGATGTTTGCAAGCAGATTCTCAATGATACCACGCCCATTTGATGCCATTGAGTCAACCGTTGCATAGGTTTTGAAAAAAGGTCATACAACCCTGAACCCTTGCGCAAGTCGAAATATCAACCTTGAACCACAAAGCTGGACACATTACAACCTAAAAACTCTTGAAACATTCCCCTAGACCTAAACTACTATTGTTTTGCTTACCTGTCATCTACATGTTGCTAGCTTTGCCACCTCATTTGACGTGCCATCAACTGTATCACATTAGCTAGTTAAGACTATGCTAACTGGGTTGCGATGCCAAAATGAAAACTTGTGATGTTACTGCTAATGTGGAGGAAACCACCAGTAAATCAGGCTAAGGGTTTAATGAAAATGGTTTTATGAGTTTCAGGATTTAAATGTTCGGTTTTATAGTTTAGGGCTGCAGTTATGCAAGAGATCAAGTTTAGGCGTGTCAAACATGGATGATCTTCAACTACAAATATGTGCTTAAGTTTAATTTTTCACCTTATTGAAATGACAAAAGCTCTCTATCAAATCAAATCTCCTGTTGTACACTTACCTGTAACATTTGGCATAGAGGCTTCTCAAGTTAGCTTTATAACTGCCATATTTACAATGCTGAACTGCAGATTTCACTTCTTTTGCTGCTACCATATGCCTTCTTGCAGTAGCTTCTCTTACAAGAATTTTGGGCTTGTTTTTCAGGGTGGTGGAGAAAGTCTTGATCAACTATCAGAGCGATGTGTCTCTTGCTTGTACAACATAGTCGAGAAACATCAAGGTAAACTGTGAGCTTCATCCTTGGAGTTTTATCTTATAATTGGATTGTCTGAGAATTTTTACATTACGCTATGATGAAATGAAATGCTTTAATCAGTCTATCAAAAGGAAGACCACTTAAGTAGTTGGCTTATTGGCATCCTTAATTGACTCGTGCTGTTTCGTGCTTCGTGTTGATATTAGGTGGAGATACTACATCAGTGTTTACACAACATAATTAATTTCCATAACATAACTCTGTAATTGCAACTGCATTTTATTTAAACCTGCATGTGAGCTTCTGATCATTTCTGAGCTTGTGTAACTCTATCAACAGGGGAGCGAATAATCTTGGTCTCGCACGGTGGAACCATCAGAGAACTCTACAGGCATGCCAGTCCAATGAAGCCTCTTCACGGTAAGATACACAACACATCCGTAAGCGTAATCCTTGTGTCTGGTGCCACTGGGCGTTGCATTGTCAAGGCGTGCGGGGACATCAGCCACCTTAAGGAAACCGGTGTTCTGGAAAATGCCTTTGGTGGCGATAAGAACTCTGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026816