BGIOSGA026823

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Revision as of 07:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026823| Description = Abscisic acid 8'-hydroxylase 2| Definition = Oryza sativa Indica Group BGIOSGA026823, complete gene.| tag = CYP707A6|...")
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Gene Name

BGIOSGA026823

Description

Abscisic acid 8'-hydroxylase 2

Definition

Oryza sativa Indica Group BGIOSGA026823, complete gene.

LocusTag

CYP707A6

Ensembl Transcript ID

BGIOSGA026823-TA

Ensembl Protein ID

BGIOSGA026823-PA

Length

4878

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24869681..24874558

Sequence Coding Region

24874314..24874558,24873855..24874176,24873501..24873653,24873155..24873415,24872950..24873039
,24872287..24872365,24870659..24870765,24869939..24870057,24869681..24869825

Genome Context

<gbrowseImage1> name=IndicaChromosome08:24869681..24874558 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:24869681..24874558 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTTCTTGCTCTTCTTTGTCTTTGTGACAGCTGCAGTGCTGTGCTTCGTCGTCCCGGCGTTCTTGCTGCTCTGCACGAGCGTGCAGAGGAGGAGAGATGTTGGACAGGGTGGAGGGCGAGATTGGCAGAAGAAGAAGAAGCTCAGGCTTCCTCCGGGATCCATGGGCTGGCCGTACGTCGGCGAGACGCTCCAGCTCTACTCCCAGGACCCCAACGTCTTCTTCGCCTCCAAGCAGAAGAGGTACGGCGAGATATTCAAGACGAATCTGCTGGGGTGCCCGTGCGTGATGCTGGCGAGCCCGGAGGCGGCGAGGTTCGTGCTGGTGTCGCAGGCGAGGCTGTTCAAGCCGACGTACCCGCCGAGCAAGGAGCGGATGATCGGGCCGTCGGCGCTCTTCTTCCACCAGGGCGAGTACCACCTCCGCCTCCGCCGCCTCGTCCAGGCCGCCCTCGCCCCGGACTCCCTCCGCGCCCTCGTCCCGGACGTCGACGCCGCCGTCGCCGCCACGCTCGCCGCCTGGTCCGGCGGCCACGTCGCCAGCACCTTCCACGCCATGAAGAAGCTCTCGTTCGACGTCGGCGTCGTGACCATCTTCGGCGGCCGGCTCGGCCGCCGGCACAGGGAGGAGCTGAGGACGAACTACTCCGTCGTGGAGAGAGGCTACAACTGCTTCCCCAACCGCTTCCCGGGGACGCTCTACCACAAGGCGATCCAGGCGAGGAAGCGGCTGCGCGCGATCCTGAGCGAGATCGTGGCGGAGCGGCGGGCGCGCGGCGGCGGCGGCGACGACCTCCTCGGCGGCCTCATGCGGTCGCGCGACGACGGCACCGCCGGCGCGGTGGCGCTGCTCACCGACGACCAGATCGCCGACAACGTCGTCGGCGTGCTGTTCGCGGCGCAGGACACCACCGCCAGCGTCCTCACCTGGATCCTCAAGTACCTCCACGACTCGCCGAAGCTTCTCGAAGCCGTCAAGGCGGAGCAGATGGCGATCTACGTGGCCAACGAGGGCGGGAAGCGGCCGCTGACGTGGACGCAGACGAGGAGCATGACACTCACGCATCAGGTTATACTGGAGAGCTTGAGGATGGCGAGCATAATCTCCTTCACGTTCAGAGAGGCAGTCGCCGACGTGGAGTACAAAGGTTTCCTGATTCCAAAGGGGTGGAAGGTGATGCCTCTGTTCAGGAACATCCATCACAACCCGGACTACTTCCAGGATCCACAAAAGTTTGATCCTTCTAGATTCAAGGTGGCGCCGCGTCCAAGCACGTTCCTGCCGTTCGGGAGCGGCGTGCACGCGTGCCCGGGCAACGAGCTGGCCAAGCTGGAGATGCTCGTCCTCGTCCACCGCCTCGTCACCGCCTACAGGTGGGAGATCGTCGGGGCGAGCGACGAGGTGGAGTACAGCCCGTTCCCGGTGCCGAGGGGCGGGCTCAACGCCAAGCTGTGGAAGCAGGAGGCGGAGGAGGACATGTACATGGCCATGGGCACCATCACAGCAGCAGGTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MAFLLFFVFVTAAVLCFVVPAFLLLCTSVQRRRDVGQGGGRDWQKKKKLRLPPGSMGWPYVGETLQLYSQDPNVFFASKQKRYGEIFKTNLLGCPCVMLASPEAARFVLVSQARLFKPTYPPSKERMIGPSALFFHQGEYHLRLRRLVQAALAPDSLRALVPDVDAAVAATLAAWSGGHVASTFHAMKKLSFDVGVVTIFGGRLGRRHREELRTNYSVVERGYNCFPNRFPGTLYHKAIQARKRLRAILSEIVAERRARGGGGDDLLGGLMRSRDDGTAGAVALLTDDQIADNVVGVLFAAQDTTASVLTWILKYLHDSPKLLEAVKAEQMAIYVANEGGKRPLTWTQTRSMTLTHQVILESLRMASIISFTFREAVADVEYKGFLIPKGWKVMPLFRNIHHNPDYFQDPQKFDPSRFKVAPRPSTFLPFGSGVHACPGNELAKLEMLVLVHRLVTAYRWEIVGASDEVEYSPFPVPRGGLNAKLWKQEAEEDMYMAMGTITAAGA</aaseq>

Gene Sequence

<dnaseqindica>1..245#383..704#906..1058#1144..1404#1520..1609#2194..2272#3794..3900#4502..4620#4734..4878#ATGGCTTTCTTGCTCTTCTTTGTCTTTGTGACAGCTGCAGTGCTGTGCTTCGTCGTCCCGGCGTTCTTGCTGCTCTGCACGAGCGTGCAGAGGAGGAGAGATGTTGGACAGGGTGGAGGGCGAGATTGGCAGAAGAAGAAGAAGCTCAGGCTTCCTCCGGGATCCATGGGCTGGCCGTACGTCGGCGAGACGCTCCAGCTCTACTCCCAGGACCCCAACGTCTTCTTCGCCTCCAAGCAGAAGAGGTAACTAGGCAATTCCTCCGTCTCATAATATAAAAAGTTTTAGCTTATATAGTCAGATATATAATTTAAAAATTGATGGCGAATGTGCTTAATATGTTGTCGTCCTCGTTGATGGTTGTGTTATTTTTGGGTGTAAGGTACGGCGAGATATTCAAGACGAATCTGCTGGGGTGCCCGTGCGTGATGCTGGCGAGCCCGGAGGCGGCGAGGTTCGTGCTGGTGTCGCAGGCGAGGCTGTTCAAGCCGACGTACCCGCCGAGCAAGGAGCGGATGATCGGGCCGTCGGCGCTCTTCTTCCACCAGGGCGAGTACCACCTCCGCCTCCGCCGCCTCGTCCAGGCCGCCCTCGCCCCGGACTCCCTCCGCGCCCTCGTCCCGGACGTCGACGCCGCCGTCGCCGCCACGCTCGCCGCCTGGTCCGGCGGCCACGTCGCCAGCACCTTCCACGCCATGAAGAAGGTGAGCGCACGCACACGCACACGCAGTTGCCGCCAGTTGCCACAGACCAGGGGTCGATCGGCTCGGCGTCACGCGACACGAGTGAAGCTAAGTGACGTGTGGGGCGCGCGCGCGTCCCGGACGTGTTTGTTGTTATGCGCGCGCGGCGTGTACGTAATGCGTGACCGGTGTTCCTGTTCTCTCTCTCTCTTTCGTATCCAGCTCTCGTTCGACGTCGGCGTCGTGACCATCTTCGGCGGCCGGCTCGGCCGCCGGCACAGGGAGGAGCTGAGGACGAACTACTCCGTCGTGGAGAGAGGCTACAACTGCTTCCCCAACCGCTTCCCGGGGACGCTCTACCACAAGGCGATCCAGGTATACGCACGCGCGCACCCGCAAATCTCTGTCGAATTCGACATTGATCATCATGCAAATTAAACGGCATGCGTTGCGCATGCAGGCGAGGAAGCGGCTGCGCGCGATCCTGAGCGAGATCGTGGCGGAGCGGCGGGCGCGCGGCGGCGGCGGCGACGACCTCCTCGGCGGCCTCATGCGGTCGCGCGACGACGGCACCGCCGGCGCGGTGGCGCTGCTCACCGACGACCAGATCGCCGACAACGTCGTCGGCGTGCTGTTCGCGGCGCAGGACACCACCGCCAGCGTCCTCACCTGGATCCTCAAGTACCTCCACGACTCGCCGAAGCTTCTCGAAGCCGTCAAGGTAAACGCAACGATAATTAACCAGAGTTTAAGTACTCGATCACGATCGAGCGAGAACGATGGTGAGCTAACCACCGATGCTTTTTTTTTCCGTCGTGTCGATCGCGCGCGCGCAGGCGGAGCAGATGGCGATCTACGTGGCCAACGAGGGCGGGAAGCGGCCGCTGACGTGGACGCAGACGAGGAGCATGACACTCACGCATCAGGTACAAGCATGCCTCTTTGTTGTTTTTACTCCCGTTTTATTGTTACAAGGAAGACGAATATGCACCTATTGCTGCATCACACATCACGGAAAAGAATGGCTTTAGTTTAGTTTGGAGATTAGCTAGCATTTTGTGTTTGGAAGTATATGTTTGGCTGTGTATATCTACTGTATATCTATATGTGTGGATATATATAGAGAGACTTAATTATTATTCTTATTTGGTTTAGAAATGAGGTGGGATGAGTTAGACTTATCCTTATTTTTTTAATGGGATAATCCAATTATCTGTTTGGCATGAGAGATGGAGTGATCTTATTTTTCTTAGGGAAGGAGGGGGTGGCCCACATATCAATAACAGAGAGAAAGTGAGTTAGATTGGTCCACCAAATTTTGAGATATGAAATTGATCCGAATCTTAGGGAAATATTCCTCTTTGGGAATCAATCCATCACATCTATTTCTAAACAAACATCCTGAAAAATGGATTTGCCCCAACCTAGCCTATATCAATTGAACCAAACACATGCCAAAAGTTCAGTAGCACTGTGCTCATTTGTGCCACTTTGTTTCCATTCGATGCAGGTTATACTGGAGAGCTTGAGGATGGCGAGCATAATCTCCTTCACGTTCAGAGAGGCAGTCGCCGACGTGGAGTACAAAGGTAAGCACGTGTTTAACATGGATTGGGAGTCAGTGTACACTGTACTGGAGTCACTGAACAAAAGCTAGCAGTAGCAGCTTGCATTTTGCAGTACGTTAGCCAGTTGTACCACCAGCTGGATCATATATATGGATCATGCATGTACAGTTCCTCCCATTGCACCTCGATGTGGTCCTAATAATATGGACTCCAAATTAAAGTCACCTTGAGAAAATATCGTACAAGATTAAACAATAAGAAAAAAAATGGAACCTCGGATAAGGCCATGGAAATAAATAAATGGGTTTAAAAATGGATAATATCGAGGTGTCTACATATATATATCATGGATCATAAGTCAACCTTGCATTTATGAGATCAATGTTAAGGAACATACACATCTTCAAGCATATCTAGTGGCAAAAAATGATCGAAATCTATCATACCTTTTGGGAATAATTGTTGATTTATTGTGCCAGTCAATCTCCTTTTTTCACATACTATAGATTAAAATCCTAGCATATGCATATATAGGATATTTTTATGCGCAATATTGTAGAACATATTTCCCATTAATTGTTTGATCTATCAAACTTTGGAGGTTCCTAGGACTAGCTAGAAAAGGTGTAAACCGTTTTGGGAGGGTTAATGCTTAGCAACCTCACCAAATGCTAGTAATTAACTCCAACCGTTTTGGGAGGGTTAATGTTTATCATGGGAGGGTTAATGTTTTCTTTAAAAAAAATATTGTGGTCTTCTGTAATAAGACTGATAACCAACTGCATGCATGCTCCCCCTTGAAGAGAGGTGTTCAGTAAATTTCAATCGAAATAGGGGCAACAGACAAATTCATATTTTGTAGCAAAGATAAAGATATACTGTAAATAAAAAAATTAAAATTAAGGAACATAAACTACATGATGAGTAACGTCATATCCACCTCAGCATAATCATGCTGCTCCGAACAAGTGGCTTGATTATTTCTCATGCATATAAGCCACATGGCAATAAAGAGGGATGCATTTTAATTTGTTTAGGCACAGTTAATTGTCGTCTCCAGTGTTGTATGAACACCAGAGCACCCTATTTCAGCTTCCTTGTGTGATATGATATACTGACATGAGATGGTGTATTTTTCGCCATAAAAGGGGGCAAAACATCCATGTCCTCTCGTTCCGATTAATATCTGAATCATCAGCATCACAACGGGCGGTCCAGATGCATCCTTAGCTGCTCCTGTTCCCGGCCGGCACCGGTAGCTAGCGACCGATTCACTCCATTTTCGAGTGGCAGCGTAGCTGCAGAAATGAATTGAGATTGGGAAAGCAATTGAGGTGGTTCTGGGAACATTTATTATGTCGTATAATAGAAGCGGCATAATAATTAGGAACATTAATTATGTAGAGTAGCACTCAGTGTTTAATTTGCAAAGTGGTATCTTTCGACAAGTTAAAGTCGCATATATATATTTTCGTCACTGAATTCAATTTCGAGTGAGACTGAACGACGTTTGTGTCGATCTGTTTTGTGGTGTTTTGTCAGGTTTCCTGATTCCAAAGGGGTGGAAGGTGATGCCTCTGTTCAGGAACATCCATCACAACCCGGACTACTTCCAGGATCCACAAAAGTTTGATCCTTCTAGATTCAAGGTAATGGGTCCTATTCCTTACTCCTAAGCTACTGCTCACTGACCCTTGAATATGGATTGCATCAGACTAAAGTAAACTATTAGCGGCATTAAGTACACACGAAGACTTTTAGGACATCCCATCAGAAGAGTGGTAGTAGCACAGTTGCAAATCCTCACACACGCTCAAAATTCAGACTCTGGTCTCGCTTACGAGACATGCAGCAAAGTCAAAGGAAGCAATTACTGGCTGCTTACCATCTTCGTTCACACTCATTGTTGACTCTTTTGCGTAGACTCATTAAACCAGATCACTAATTTAACATCAGTTTAATTCCCCGGCCAGGCCTGCACTAGCTTGGGCGTACTTAACGACGACATCTCTGAATTTTGCCGGCCGCTTCAGTAAGCAGGTGGCAGCTAATTAAGTGTTGTGCATGCACGCGGCCAAGTCCAAACCAAACACTAGCTAGAGTACAAAGGTTAATTTAGGCTCACTAAGATACAATCTCTCGAGCATTAGCAGCCGGAGATTAGGCCGCGAATCTTTTGGACTTTGGTTGGACCGAGAGTGACTCATCCTTCAGTGTACGTGCGTGCGTGACGCGTGGCTGTGCGTGCAGGTGGCGCCGCGTCCAAGCACGTTCCTGCCGTTCGGGAGCGGCGTGCACGCGTGCCCGGGCAACGAGCTGGCCAAGCTGGAGATGCTCGTCCTCGTCCACCGCCTCGTCACCGCCTACAGGTAAGTGATACGGCGTACGTGAAAACCACCGTGTTTTCCACGGCTTTTGCCGGTGGCGATCGACAGTGTGACGGACGGCGTACGAGCGGATGATGTTGTTGTTGTTGTTGCAGGTGGGAGATCGTCGGGGCGAGCGACGAGGTGGAGTACAGCCCGTTCCCGGTGCCGAGGGGCGGGCTCAACGCCAAGCTGTGGAAGCAGGAGGCGGAGGAGGACATGTACATGGCCATGGGCACCATCACAGCAGCAGGTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026823