BGIOSGA026839

From RiceWiki
Revision as of 07:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026839| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026839, complete gene.| tag = OsI_295...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026839

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026839, complete gene.

LocusTag

OsI_29541

Ensembl Transcript ID

BGIOSGA026839-TA

Ensembl Protein ID

BGIOSGA026839-PA

Length

3653

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24583667..24587319

Sequence Coding Region

24586281..24587319,24586044..24586184,24583667..24584553

Genome Context

<gbrowseImage1> name=IndicaChromosome08:24583667..24587319 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:24583667..24587319 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCTTCCGTGCAGCCGCGGCAGTTCGGCCACCTCGAGCCGGGCTCCGCGCCGGTGTGCGGCGCCGCATCCTCGAACGGCGCCAAGGCGTACCCTCCCGCGAACGGCATCCCGCACCGCGCCGACTCACCGGTGCGCGGGTGCGGCTTCCCTCCCCTCGTCTCGCCACCTTCGCGGAAGCCGCCCAGCGATGGGTCGGACGACGAGGAGGAGGAGCAGGAGGACTGGCGGGAGCTGTACGGCTCGCACCTGCAGCTGGAGGTGGAACCGTCGGTGCGCGACGCGCGCGACGAGGGCACCGCCGACGCGTGGATCGAGCGCAACCCGTTGCTGATCCGGCTCACCGGGAAACACCCGCTGAACTGCGAGGCGCCGCTGGCGAGGCTCATGCACCACGGCTTCATCACCCCGGCGGCGCTGCACTTCGTGCGCAACCACGGCGCAGTGCCGCGGGGTGACTGGTCGACGTGGACCGTCGAGGTGACGGGGCTCGTCAAGCGTCCCATGCGGCTCACCATGGACGAGCTGGTCAACGGCTTCCCCGCCGTGGAGGTCCCCGTCACGCTGGCCTGCTCGGGGAACCGCCGCAAAGAGCAGAACATGGTGCAGCAGACTGTGGGGTTCAACTTTGGCGCCGCCGCGGTGTCCACGTCGGTGTGGCACGGCGCCCGCCTCCGCGACGTGCTCCGGCGGTGCGGCATCATGCCCAGCAAGGGCGGTGCGCTCAACGTGTGCTTCGAGGGCGCCGAGGACCTCCCCGGCGGCGGCGGCTCCAAGTACGGCACCAGCATCACACGCCAGTGGGCGCTGGACCCGTCGCGGGACATCATGCTCGCCTACATGCAGAATGGCGAGCCGCTGCTCCCCGACCACGGCTTCCCCGTCCGCGCCATCATCCCCGGCTGCACCGGCGGCCGCATGGTCAAGTGGGTCAAGCGCATCATCGTCACCACCGCCGAGTCCGACAACTACTACCATTACAAGGACAACCGCGTCTTCCCGTCCCATGTCGATGCCGAGCTCGCCAACGCCGATGCGTGGTGGTACAAGCCGGAGTACATCATCAACGAGCTGAACGTGAACTCGGTGATCACGGCGCCCGGGCACGACGAGATCCTGCCCATCAACGGCATCACCACGCAGCGCGGCTACACCATGAAGGGATACGCCTACTCCGGGGAGGATAAAATTTTTCCTATACTTCGGCTGAGCTATGATGATCTGCCATCACACATGAAGCAATGCTTTGCTTTCTGTGCTATATTCCCAAAAGATTATGAGATTGATGTGGAGACATTGATCCAATTATGGTTGGCACATGACTTCATACCACTGCAGGAGGAAGACCATCTGGAAACAGTAGCCCAGAATATTTTCAAGGAACTAGTTTGGAGGTCATTTTTTCAAGATGTGAATAAAATTTCTCAGCGGGAGGAGAATGTGTATAGGAGTCAGCTCCGTGACAGAACAACGTGCAAGATACATGATCTTATGCATGACATTTCTCAATCTGTTATGGGGAAAGAATGTCTCAGTATAATTGGTTCGTCTAATTTGAAAAATCTGATGCGAGAACATCCTTTATATCACGTTCTCATACCATACACCAGCATTGCTCTTCCAGATGACTTTATGGGAAATGAAGCTCCAGCTCTCCGAACTTTATTGTTTCGAGGGTATTATGGTAATGTCTCAACATCACATTTATTTAAGTACAATTCTCTACAGCTAAGAGCATTAGAGCTCACAAGAAGGGAAGAATTACCAATCAGGCCAAGACACCTACAACATCTAAGATATCTAAATCTCTCAGACAACAGTAATATCCATGAACTTCCTGCAGACATAAGCACAATGTACAATCTACAGACATTAAACCTTTCTGATTGCTATAATCTTGTTAGACTCCCAAAAGATATGAAGTATATGACAAGCCTACGACACCTTTATACAAATGGATGCTCAAAATTGAAGTACATGCCTCCAGACCTTGGACAGTTAACTTCCTTCTCCAAAACAGAACACTTGTTGGTAATTACTATTCAAATATATTTTGAAATGTGA</cdnaseq>

Protein Sequence

<aaseq>MAASVQPRQFGHLEPGSAPVCGAASSNGAKAYPPANGIPHRADSPVRGCGFPPLVSPPSRKPPSDGSDDEEEEQEDWRELYGSHLQLEVEPSVRDARDEGTADAWIERNPLLIRLTGKHPLNCEAPLARLMHHGFITPAALHFVRNHGAVPRGDWSTWTVEVTGLVKRPMRLTMDELVNGFPAVEVPVTLACSGNRRKEQNMVQQTVGFNFGAAAVSTSVWHGARLRDVLRRCGIMPSKGGALNVCFEGAEDLPGGGGSKYGTSITRQWALDPSRDIMLAYMQNGEPLLPDHGFPVRAIIPGCTGGRMVKWVKRIIVTTAESDNYYHYKDNRVFPSHVDAELANADAWWYKPEYIINELNVNSVITAPGHDEILPINGITTQRGYTMKGYAYSGEDKIFPILRLSYDDLPSHMKQCFAFCAIFPKDYEIDVETLIQLWLAHDFIPLQEEDHLETVAQNIFKELVWRSFFQDVNKISQREENVYRSQLRDRTTCKIHDLMHDISQSVMGKECLSIIGSSNLKNLMREHPLYHVLIPYTSIALPDDFMGNEAPALRTLLFRGYYGNVSTSHLFKYNSLQLRALELTRREELPIRPRHLQHLRYLNLSDNSNIHELPADISTMYNLQTLNLSDCYNLVRLPKDMKYMTSLRHLYTNGCSKLKYMPPDLGQLTSFSKTEHLLVITIQIYFEM</aaseq>

Gene Sequence

<dnaseqindica>1..1039#1136..1276#2767..3653#ATGGCCGCTTCCGTGCAGCCGCGGCAGTTCGGCCACCTCGAGCCGGGCTCCGCGCCGGTGTGCGGCGCCGCATCCTCGAACGGCGCCAAGGCGTACCCTCCCGCGAACGGCATCCCGCACCGCGCCGACTCACCGGTGCGCGGGTGCGGCTTCCCTCCCCTCGTCTCGCCACCTTCGCGGAAGCCGCCCAGCGATGGGTCGGACGACGAGGAGGAGGAGCAGGAGGACTGGCGGGAGCTGTACGGCTCGCACCTGCAGCTGGAGGTGGAACCGTCGGTGCGCGACGCGCGCGACGAGGGCACCGCCGACGCGTGGATCGAGCGCAACCCGTTGCTGATCCGGCTCACCGGGAAACACCCGCTGAACTGCGAGGCGCCGCTGGCGAGGCTCATGCACCACGGCTTCATCACCCCGGCGGCGCTGCACTTCGTGCGCAACCACGGCGCAGTGCCGCGGGGTGACTGGTCGACGTGGACCGTCGAGGTGACGGGGCTCGTCAAGCGTCCCATGCGGCTCACCATGGACGAGCTGGTCAACGGCTTCCCCGCCGTGGAGGTCCCCGTCACGCTGGCCTGCTCGGGGAACCGCCGCAAAGAGCAGAACATGGTGCAGCAGACTGTGGGGTTCAACTTTGGCGCCGCCGCGGTGTCCACGTCGGTGTGGCACGGCGCCCGCCTCCGCGACGTGCTCCGGCGGTGCGGCATCATGCCCAGCAAGGGCGGTGCGCTCAACGTGTGCTTCGAGGGCGCCGAGGACCTCCCCGGCGGCGGCGGCTCCAAGTACGGCACCAGCATCACACGCCAGTGGGCGCTGGACCCGTCGCGGGACATCATGCTCGCCTACATGCAGAATGGCGAGCCGCTGCTCCCCGACCACGGCTTCCCCGTCCGCGCCATCATCCCCGGCTGCACCGGCGGCCGCATGGTCAAGTGGGTCAAGCGCATCATCGTCACCACCGCCGAGTCCGACAACTACTACCATTACAAGGACAACCGCGTCTTCCCGTCCCATGTCGATGCCGAGCTCGCCAACGCCGATGGTAACGTATATTTACCATGCGTGCATGCGTAAAACACATTTTACCGTTCTTGCGAATATGTATGTATACTGACTCGATCGAACAAATGCTCATCAGCGTGGTGGTACAAGCCGGAGTACATCATCAACGAGCTGAACGTGAACTCGGTGATCACGGCGCCCGGGCACGACGAGATCCTGCCCATCAACGGCATCACCACGCAGCGCGGCTACACCATGAAGGGATACGCCTACTCCGGTGAGCACGCACTCCTCCATAACTTCTCTCTGAATCGCTCGCCTTAATTTACACTCGGTTGCAGTGGTTTGTCATTTTGCACCATCCTTTTGTGTTTGACCTTGATTAATTTAACTTGTCCTAGTAAACAATGTTACTTAGGTGGCCAGAAAAATCTCTAGTGCCTTTTGGAAACTTACTCTCAACGTAGTAGTATACCACTTTGCAAAGTGAATAGTGGTAATCAAATCCAACAAATATCTTCTGAATTTTCTGACAGTAATACCCCATCAGCATATGGAGTACATAGCTAAAGTACTGGTAATTAAATAACACCTTGGCCACCAGTTAGTCATTTGTCAAAGTTGAGCATGCCTTGCAGATACGGCTAGTAGTATCGTAAAGGGTCATTTAATTTGCAAAAAAAAAGATTTATTTTAGATAATGGATAGAATTTTGGCCTCTATATCATCCTTAAAAAGATATCGAGATATACCGTGTTTAATACTTTTTAATACTTTCAAGTATTACATATCTCGAGCTATTAAATTTTTTGGTGCAAAATTTAAGTACCAGAGGTATTTTTTTGAAGTACTGTAAAATTTTCATTGTTTAAAAAAAGAAAATGAAGGGTCTTCAAAAGAGAAATTTAAGGCGCAGTGAATGATGGAGCGATGGGCCTGATGGTGATCTTTGTCTCTGTGGTTTGGTAGGCGGCGGCAAGAGGATCACGCGGGTGGAGGTGACGCTGGACGGCGGCGAGACATGGCTGGTGTGCGTGCTGGACCTCCCGGAGAAGCCCACCAAATACGGCAAGCACTGGTGCTGGTGCTTCTGGTCCGTCGAGGTCGAGGTGCTCGACCTCCTCGGCGCCAAGGAGATCGCCGTGCGCGCCTGGGACCAGTCGCACAACACCCAGCCCGAGAAGCTCATCTGGAATCTCATGGTAGGTTCTTCATTTCGTCTCCGGCCATGGCGACGGCGACGGCGATGTAGACGACGATGGCAAATTCATTCGATCGGTTGGGTTTTTGCAGGGGATGATGAACAACTGCTGGTTCAAGGTGAAGGTGAACGTGTGCCGGCCGCACAAGGGTGAGATCGGGCTGGTGTTCGAGCACCCGACGCAGCCCGGGAACCAGACCGGCGGGTGGATGGCGAGGCAGAAGCACCTGGAGACGGCGGAGGCGGCCGCACCGGGGCTGAAGCGGAGCACGTCGACGCCGTTCATGAACACCACCGACGGCAAGCAGTTTACCATGTCCGAGGTGCGCAAGCACTCGTCGCAGGACTCGGCGTGGATCGTCGTCCACGGTCACGTCTACGACTGCACGGCCTTCCTCAAGGACCACCCCGGCGGCGCCGACAGCATCCTCATCAACGCCGGCACCGACTGCACCGAGGAGTTCGACGCATCCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGAATGATGTATAACTAAAAGCAACATTTGCAATGAAGGGGAGGATAAAATTTTTCCTATACTTCGGCTGAGCTATGATGATCTGCCATCACACATGAAGCAATGCTTTGCTTTCTGTGCTATATTCCCAAAAGATTATGAGATTGATGTGGAGACATTGATCCAATTATGGTTGGCACATGACTTCATACCACTGCAGGAGGAAGACCATCTGGAAACAGTAGCCCAGAATATTTTCAAGGAACTAGTTTGGAGGTCATTTTTTCAAGATGTGAATAAAATTTCTCAGCGGGAGGAGAATGTGTATAGGAGTCAGCTCCGTGACAGAACAACGTGCAAGATACATGATCTTATGCATGACATTTCTCAATCTGTTATGGGGAAAGAATGTCTCAGTATAATTGGTTCGTCTAATTTGAAAAATCTGATGCGAGAACATCCTTTATATCACGTTCTCATACCATACACCAGCATTGCTCTTCCAGATGACTTTATGGGAAATGAAGCTCCAGCTCTCCGAACTTTATTGTTTCGAGGGTATTATGGTAATGTCTCAACATCACATTTATTTAAGTACAATTCTCTACAGCTAAGAGCATTAGAGCTCACAAGAAGGGAAGAATTACCAATCAGGCCAAGACACCTACAACATCTAAGATATCTAAATCTCTCAGACAACAGTAATATCCATGAACTTCCTGCAGACATAAGCACAATGTACAATCTACAGACATTAAACCTTTCTGATTGCTATAATCTTGTTAGACTCCCAAAAGATATGAAGTATATGACAAGCCTACGACACCTTTATACAAATGGATGCTCAAAATTGAAGTACATGCCTCCAGACCTTGGACAGTTAACTTCCTTCTCCAAAACAGAACACTTGTTGGTAATTACTATTCAAATATATTTTGAAATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026839