BGIOSGA026859

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Revision as of 07:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026859| Description = cDNA clone:J013069F06, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA026859, complete gene.|...")
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Gene Name

BGIOSGA026859

Description

cDNA clone:J013069F06, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA026859, complete gene.

LocusTag

B1111C03.10-1

Ensembl Transcript ID

BGIOSGA026859-TA

Ensembl Protein ID

BGIOSGA026859-PA

Length

2952

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24066797..24069748

Sequence Coding Region

24068900..24069748,24068254..24068406,24067865..24068158,24066797..24066817

Genome Context

<gbrowseImage1> name=IndicaChromosome08:24066797..24069748 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:24066797..24069748 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACCTCGCCACCTCGCCGCAAACCACGCCTGCCGCCGCCGCCGCCGGAGGGGGATCCGACTGCGTCGGCGGTGGGGGCGAGCCTGGAATCCCTCCCGGGGGAGCTCCTCGAGAACATCGTCTCCCGCCTCTCCCTCCGCGACGCCGTCCGCACCTCCGCGATCTCCCGCTCCTGGATCCACCGGTGGGAGTCCGCCCCCGACCTCCGCCACTACTGGCCCCGCCGCTCGCGCCCCGACGCCATCTGCGCCGTCCTGGCGCGCTACTCCCGCAGCGTCGGCCAGTTCTGCACCTGGGGGATCCGCGCGGACGCGTTCCCCCACATCGACGAGTGGCTCCCCCTCCTCGCCGCCAAGGGGGTCCAGACCCTCACCCTCTCGTTCTGGGACTACAGCGATGTCAATGTGGAGTACTACACCCTCCACCCCGCCATCTTCGCCTGCGGCCAGCTCACCAGCCTCCACCTCGAGCGCTGCTTCCTCCCCACCGCGCCCGAGGGCTTCGGAGGGTTCCCGAATCTCACCTTGTTGAGCCTCGTCTACGTTGGCCTCCCGGAGAATGGGGAGAGGAAATTGGAGGCCATGATCCGCATGTCCCCGTCGCTTGTCTCGTTGGAGCTTAGCAATGTTGAGGTTACTGATGACGACTTTGAGGATTGGATAATTCAGGCTCCGAATCTCGAGAGGCTGACTATTACTTCCGATATCGATTACGGATGGCAGATCCAGGATCTTCCATCTATACAAGATGCTAATATCAATATTGAAGACTACTCAATTGATCGCGATTTCGTCAAGCTTCTCACATCTTTGGCCCAAGTCGGGGAGCTCGAGTTGTTTATACCGTCCGCAGATGGTAATGTTCTAGAGGGAATTTCATGTTCTTTTCAGAAATTAAGGAGTTTAACTCTTCATACAAACTTCTACAAAGCATCTAGCATTTTATCTACATTTGGTTTACTCACGAGAGCTCCCAATCTTTTACATCTGGAAATTGAGATCACAGATCATGAGAATCAGAGCAATGAAGTAGATATAGATTTTTTAAATGCACTGTGGACCAACAGTCTTTTTGCAAATCTTGATTTTGTTAGCATAAAGAGTGCCACTTGCTGGTCAAATGAGATGCGCTTTATTGAATTTGTTCTATCCAAAGCAAGATTACTTGGTGAATTTTATATTTATCATGATGATACTGGTTCATTCTCGAAGCCTAGAGAAGAGGCAATTATTGAGTTAGCAAAATATAAAAGAGCATCACCAAAGGCAAAAGTATTCTTCAGGGACATGGAGGATACATGGCTGTACTCATGA</cdnaseq>

Protein Sequence

<aaseq>METSPPRRKPRLPPPPPEGDPTASAVGASLESLPGELLENIVSRLSLRDAVRTSAISRSWIHRWESAPDLRHYWPRRSRPDAICAVLARYSRSVGQFCTWGIRADAFPHIDEWLPLLAAKGVQTLTLSFWDYSDVNVEYYTLHPAIFACGQLTSLHLERCFLPTAPEGFGGFPNLTLLSLVYVGLPENGERKLEAMIRMSPSLVSLELSNVEVTDDDFEDWIIQAPNLERLTITSDIDYGWQIQDLPSIQDANINIEDYSIDRDFVKLLTSLAQVGELELFIPSADGNVLEGISCSFQKLRSLTLHTNFYKASSILSTFGLLTRAPNLLHLEIEITDHENQSNEVDIDFLNALWTNSLFANLDFVSIKSATCWSNEMRFIEFVLSKARLLGEFYIYHDDTGSFSKPREEAIIELAKYKRASPKAKVFFRDMEDTWLYS</aaseq>

Gene Sequence

<dnaseqindica>1..849#1343..1495#1591..1884#2932..2952#ATGGAGACCTCGCCACCTCGCCGCAAACCACGCCTGCCGCCGCCGCCGCCGGAGGGGGATCCGACTGCGTCGGCGGTGGGGGCGAGCCTGGAATCCCTCCCGGGGGAGCTCCTCGAGAACATCGTCTCCCGCCTCTCCCTCCGCGACGCCGTCCGCACCTCCGCGATCTCCCGCTCCTGGATCCACCGGTGGGAGTCCGCCCCCGACCTCCGCCACTACTGGCCCCGCCGCTCGCGCCCCGACGCCATCTGCGCCGTCCTGGCGCGCTACTCCCGCAGCGTCGGCCAGTTCTGCACCTGGGGGATCCGCGCGGACGCGTTCCCCCACATCGACGAGTGGCTCCCCCTCCTCGCCGCCAAGGGGGTCCAGACCCTCACCCTCTCGTTCTGGGACTACAGCGATGTCAATGTGGAGTACTACACCCTCCACCCCGCCATCTTCGCCTGCGGCCAGCTCACCAGCCTCCACCTCGAGCGCTGCTTCCTCCCCACCGCGCCCGAGGGCTTCGGAGGGTTCCCGAATCTCACCTTGTTGAGCCTCGTCTACGTTGGCCTCCCGGAGAATGGGGAGAGGAAATTGGAGGCCATGATCCGCATGTCCCCGTCGCTTGTCTCGTTGGAGCTTAGCAATGTTGAGGTTACTGATGACGACTTTGAGGATTGGATAATTCAGGCTCCGAATCTCGAGAGGCTGACTATTACTTCCGATATCGATTACGGATGGCAGATCCAGGATCTTCCATCTATACAAGATGCTAATATCAATATTGAAGACTACTCAATTGATCGCGATTTCGTCAAGCTTCTCACATCTTTGGCCCAAGTCGGGGAGCTCGAGTTGTTTATACCGGTAATTCTATTGTGGTCTCTTTTCTTTTTTTATAATTGGTCATGAACATGCATGCATGAGTTTGCCAGGTTGATTCTTGTGCATGATTGGGGGCTAGTGGTAGCTTGACTCATGGGCAAGAGGGGTCGTTTTTAACTACTGCAATTTTCTCAGTTCAAATTGAAAACTGGTACAATAGTATTTGAAAACGTATTCTGCAACATAAACGATTATTTCTAATGTGCAGTGCTTGTATAGAAGCTGCAGATCAGCATTGCTTTGAATATGTAATGTTGTTTTACACAATTCATCATTTAAGCAACAAACTGCCCCCAGCAAAAAGCTAGTATGACAAATATATATATATATATGTTTGCTTTTCAGAATGAAAGTACTTCTCGTTAGTTAAGTAATTCAAAATCTGCATAGTGGCTAACCAAGTAATGCATGATGTTTCCATAATTTTTCTTATAAAATTATTTTCTCTTAAGGACTAATGGGTATGTTTTCTCAGTCCGCAGATGGTAATGTTCTAGAGGGAATTTCATGTTCTTTTCAGAAATTAAGGAGTTTAACTCTTCATACAAACTTCTACAAAGCATCTAGCATTTTATCTACATTTGGTTTACTCACGAGAGCTCCCAATCTTTTACATCTGGAAATTGAGGTAATGTTTACTACTATTCTCCATTCTTGTTGATGCTGTCCCTTGATAGTTCTTTATACATGACCCCGTTAAAATGTGTCTTTTGATTTTTGCAGATCACAGATCATGAGAATCAGAGCAATGAAGTAGATATAGATTTTTTAAATGCACTGTGGACCAACAGTCTTTTTGCAAATCTTGATTTTGTTAGCATAAAGAGTGCCACTTGCTGGTCAAATGAGATGCGCTTTATTGAATTTGTTCTATCCAAAGCAAGATTACTTGGTGAATTTTATATTTATCATGATGATACTGGTTCATTCTCGAAGCCTAGAGAAGAGGCAATTATTGAGTTAGCAAAATATAAAAGAGCATCACCAAAGGCAAAAGTATTCTTCAGGGACATGGAGGTGAGTAGCCTGTTAACTATCTGTTGATTATTTTTATGCCTTTTCAGAGGCTCGTTCTTGAAAGTCCTGTTCCATATACTTGCTTGTGTTATATGCTCTCAGATCAATTTGACATATGCTCTGTGGCAGTCAAAATGAAAACCATACAATTTTCTATTTCGAATTGGGAATTAGGATGCAAGGAAGCAATTAATTATGCATAAACTATTTGTTCTAAGGTGAATATAACAAGCACTGATTACTAATACTAGGTAGTGACTGCTATGTCATTATCTGAAAGGAATGAGTCCATTTTACAGCCCTGAACTTATGCAAAATGTTCACATAACTCATTAGCTATAAAACTGATTATCAGGGCCTGTTTGTTTTATTTCTGGCCAGAGCTTCCTACTCAGGTTCGAGAAGGTAGACTTTTCATGTCATGCGTTCAGTTTGTTTCCACAATTGCAGTATGTCACACTTTGTTAGCCATACAATCCATATGTCGAGGTACGCTAATTTTCTAGCCACCAATGGAACACATATTTTGTTAGCTACAAAAAATTAGTTATGACAAATTTTGGCAGCTAACCCGAGTGCTATTAAAAGCACCCAAACCCACAAACCAGATTTCTGCCTCCCAGCACCTATAGTGGTTCTGCTGGCCAAAAGGATGTGGAACGAGAAGGGTGAGACAACTGGAGGTAGAGGAATGTAGTGATTGTTAGGTCTCTGTTGAGGTTGAGGAGTGCCATTGCGCTCTCATCTGTATCAGTACTGTATCAAAGAAACCTTTTTAGTGTCGTCTCGAAATTTTCCCCTTTGCATTAGCACATATCTAAATAACTCTTGTTACAAAAATGCCATGCTGGTGAATGTCATGTTAGCTGGGTCTTCAAGGTAGAACACCTTATTCCCCCTTTTGCACCCTAATTGTGATCTTAATAGTTCTGTAGTATCAAGTAGGTCAAATATTTGAATACAACATTTTAACTGACCCTCTTATATTTCTGTAAGTACCTTCAGAAAATCATGATCTGATATTTATTATTTTCTTCTGGTGGACAGGATACATGGCTGTACTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026859