BGIOSGA026873

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Revision as of 07:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026873| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026873, complete gene.| tag = P0493A0...")
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Gene Name

BGIOSGA026873

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026873, complete gene.

LocusTag

P0493A04.31

Ensembl Transcript ID

BGIOSGA026873-TA

Ensembl Protein ID

BGIOSGA026873-PA

Length

5660

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23900016..23905675

Sequence Coding Region

23904407..23905675,23903510..23903943,23902670..23902831,23901273..23901348,23900682..23900840
,23900016..23900108

Genome Context

<gbrowseImage1> name=IndicaChromosome08:23900016..23905675 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:23900016..23905675 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTTGGTGTTCAAATGGGTGGGGAGATGGGTCTCGGATCGAATGGAGGTGGCGGGGCTGGAGGCCAGGTGCATGATGAAATGCCGCACCGGAATGTGGATAGTTCGGGGAAGCGTCGTAAGATAGGGATGGAGATCCCATACGTCTCTGATTCAGAGAGTGACAATGATGATGACTGCATACTTCCAGGGGAGGATGGCAGTAGGATGCCGGTACAGTTATGCGCTGCTTCTGATTTGATTGAACTGAATCTGTTCACCATGAGCATGGGCAGGACAGATGAAGGGAGAATGGGTGATTCTGTGAAGACAGGTAAAAAGAAAGCTAGTGGAGTTACTATTCGAGAAAATGACATCCCCATTGACGAGCATGTGCACGGACAGAGTTCGGCAATTGGTGAGAGTATTGAGCTATTAGCATCTCCTATGCGAAGTGCATTAGGCGAAAACCATGCAGGTATGTATTCCACAGAAGAGGAGAGAAGGCAGAAGGCTAGGTATAATGTTAAAGGCAAAGGGAAGCTGGATTTGGGGAACGATGATTCTGGTGCTGGTACCGGGATTGGTAAGTTTAGTCCCGATAGTAAAGGAAAGGCTAAGATGGTTGTGGAAGAGAGTTCATTGTCTGTTAGCTCAGGTGCGGATCAAATGGATTTGAACTCAGTGATTTCTGAAGAGGTGCAGAGTTTCCCAGCAGATCATTGGGAACCACGTCGGAGAGAAAGGGCAAGACAGAGAGCTATTGAAATGGCTCCTAGGTTTGCATTCTTCAAAGCAGATGAAGATGGACATAGTGATGATGGTGATGATGATGATGACAATGCAGAAGAGTTGGAACCGGTTCCTGATCCTCAGGACTGGCCAGGTCCATTTTCAACTGCAATGAGGATCATTACTGACAGAGAAGCTAAACTGAGAGCTCGGGAGTTGAATTCTTCCAACTTGAACAAGTCTGCTAATAAGGTCATTTCGTGGATACCTTCCAAAGATAGGAAATCTCCACTGCGATCTGCTCCATCGCTTACTAGCTTGTGCTTGCAAACTCTTTCAAATAATGCTGAAGCTATCGAATCACTTGCTGGCATTCCAGATGAGCTAAAAAATAGACTCTTATCTAGTCTATGCCATTCTAGAAAGATGAATGTCCATCTTCTTGGTGAACTCATGTGTGATAATCCTGTGACAGTGCAACTCAGTGAGTGTTCATGGTTGAGTGAGGATGACTTTGAGACCATTTTTGGGAAATGCAGGACAGAAATCTTGCAGGTTTTGCAGCTTGACTTATCTGGGCGATGCATGCCTGACTACATGTTGCCTGCTACCTTAGCAAAGGTTCCTAACAGCATGCCATTATTGAAAAAAATATCTCTGAAGGGAAATTACCGTCTTTCTGATAGTGGGTTAGACACAATAATCTCTGCAGCCCCTTCTCTGAGTTCGCTAAATTTGTGCGAGTGTTCTCTTCTCACTTCAACTGGAATCGAGAATCTTGCTAACAAGTTGAGTTTAGTCCTTACGGAACTATATATTGATGACTGCTTAAACGTGGATGCCATGATGATTCTTCCTTCCTTACAAAAGATTAAGCATTTAGAGGTTTTATCAATGTCTGGCATACAATCTGTCTGCAATAAGTTTGTCAATGAGCTTATTCCTGTACACGGTTCAAATCTGAAGGAGTTGGCATTTGCTGGTTGCTTGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTTCATTGGACCTTCGCAACCTGAATAGATTGCGGGATTCAGCAATGAGACATCTTCGCAATGGTTGTCGGCTTATAAAAAAAATAAAGCTCCAAAGGAATACATTCAGTGATGAAGCTGTGTATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGAAGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTCTGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCTGCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGATCACAGATGTTTTCCTGAAAGGCCACTCAAATTCGCTGGTTACAATTGTTGGGATAGAAGGGAATATACTGAAGCAAACGGGGAGTCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MELGVQMGGEMGLGSNGGGGAGGQVHDEMPHRNVDSSGKRRKIGMEIPYVSDSESDNDDDCILPGEDGSRMPVQLCAASDLIELNLFTMSMGRTDEGRMGDSVKTGKKKASGVTIRENDIPIDEHVHGQSSAIGESIELLASPMRSALGENHAGMYSTEEERRQKARYNVKGKGKLDLGNDDSGAGTGIGKFSPDSKGKAKMVVEESSLSVSSGADQMDLNSVISEEVQSFPADHWEPRRRERARQRAIEMAPRFAFFKADEDGHSDDGDDDDDNAEELEPVPDPQDWPGPFSTAMRIITDREAKLRARELNSSNLNKSANKVISWIPSKDRKSPLRSAPSLTSLCLQTLSNNAEAIESLAGIPDELKNRLLSSLCHSRKMNVHLLGELMCDNPVTVQLSECSWLSEDDFETIFGKCRTEILQVLQLDLSGRCMPDYMLPATLAKVPNSMPLLKKISLKGNYRLSDSGLDTIISAAPSLSSLNLCECSLLTSTGIENLANKLSLVLTELYIDDCLNVDAMMILPSLQKIKHLEVLSMSGIQSVCNKFVNELIPVHGSNLKELAFAGCLQLTSSSIKTIAGNCPQLSSLDLRNLNRLRDSAMRHLRNGCRLIKKIKLQRNTFSDEAVYRFLEQSGGYLTELCLNNVEKAGNLTAYAIARNCSTHLEVLDLSFCRELTNEALGLIVDSCSSLRILKLFGCTQITDVFLKGHSNSLVTIVGIEGNILKQTGSL</aaseq>

Gene Sequence

<dnaseqindica>1..1269#1733..2166#2845..3006#4328..4403#4836..4994#5568..5660#ATGGAGCTTGGTGTTCAAATGGGTGGGGAGATGGGTCTCGGATCGAATGGAGGTGGCGGGGCTGGAGGCCAGGTGCATGATGAAATGCCGCACCGGAATGTGGATAGTTCGGGGAAGCGTCGTAAGATAGGGATGGAGATCCCATACGTCTCTGATTCAGAGAGTGACAATGATGATGACTGCATACTTCCAGGGGAGGATGGCAGTAGGATGCCGGTACAGTTATGCGCTGCTTCTGATTTGATTGAACTGAATCTGTTCACCATGAGCATGGGCAGGACAGATGAAGGGAGAATGGGTGATTCTGTGAAGACAGGTAAAAAGAAAGCTAGTGGAGTTACTATTCGAGAAAATGACATCCCCATTGACGAGCATGTGCACGGACAGAGTTCGGCAATTGGTGAGAGTATTGAGCTATTAGCATCTCCTATGCGAAGTGCATTAGGCGAAAACCATGCAGGTATGTATTCCACAGAAGAGGAGAGAAGGCAGAAGGCTAGGTATAATGTTAAAGGCAAAGGGAAGCTGGATTTGGGGAACGATGATTCTGGTGCTGGTACCGGGATTGGTAAGTTTAGTCCCGATAGTAAAGGAAAGGCTAAGATGGTTGTGGAAGAGAGTTCATTGTCTGTTAGCTCAGGTGCGGATCAAATGGATTTGAACTCAGTGATTTCTGAAGAGGTGCAGAGTTTCCCAGCAGATCATTGGGAACCACGTCGGAGAGAAAGGGCAAGACAGAGAGCTATTGAAATGGCTCCTAGGTTTGCATTCTTCAAAGCAGATGAAGATGGACATAGTGATGATGGTGATGATGATGATGACAATGCAGAAGAGTTGGAACCGGTTCCTGATCCTCAGGACTGGCCAGGTCCATTTTCAACTGCAATGAGGATCATTACTGACAGAGAAGCTAAACTGAGAGCTCGGGAGTTGAATTCTTCCAACTTGAACAAGTCTGCTAATAAGGTCATTTCGTGGATACCTTCCAAAGATAGGAAATCTCCACTGCGATCTGCTCCATCGCTTACTAGCTTGTGCTTGCAAACTCTTTCAAATAATGCTGAAGCTATCGAATCACTTGCTGGCATTCCAGATGAGCTAAAAAATAGACTCTTATCTAGTCTATGCCATTCTAGAAAGATGAATGTCCATCTTCTTGGTGAACTCATGTGTGATAATCCTGTGACAGTGCAACTCAGTGAGTGTTCATGGTTGAGTGAGGATGACTTTGAGACCATTTTTGGGAAATGCAGGACAGAAATCTTGCAGGTAATATTTTTTTTACTCTTTATAGCTAAATGCCGTGCGCTGATATGAATTAAAAACGAATTACATGTTGTAATTTTTGTAAAAAAATTGTGAGCTATTTCATTGAACACACCCTTCATATTTTTGTTACAGGGAGCACATGACAATTTTACATTCTAATAGTAAAATTATCATTTATCCTACATATATATGTGAAAATTTTGTTACCATAGATTATTCCGTGATTAACTAGAATTTTAGAGGTTGAATAAGATATTAAAACATGTAGAAGCACCATTTCGTCCATGTGCCATGTCTCGATTTGTCGTTGAAAAACAAGTTGTTAAATTTGTCGGTTTTAGATTATGACCATAACAGTGTTTGGGTCTTAGGGTTGATCACTGATATTTTGTTAACTTTGCGGCCTTCTTATTTAAGTCACCTATTGAGGACTCATTTTCCCTCCCTTTTGCTCTTACTGAAGGTTTTGCAGCTTGACTTATCTGGGCGATGCATGCCTGACTACATGTTGCCTGCTACCTTAGCAAAGGTTCCTAACAGCATGCCATTATTGAAAAAAATATCTCTGAAGGGAAATTACCGTCTTTCTGATAGTGGGTTAGACACAATAATCTCTGCAGCCCCTTCTCTGAGTTCGCTAAATTTGTGCGAGTGTTCTCTTCTCACTTCAACTGGAATCGAGAATCTTGCTAACAAGTTGAGTTTAGTCCTTACGGAACTATATATTGATGACTGCTTAAACGTGGATGCCATGATGATTCTTCCTTCCTTACAAAAGATTAAGCATTTAGAGGTTTTATCAATGTCTGGCATACAATCTGTCTGCAATAAGTTTGTCAATGAGCTTATTCCTGTACACGGTTCAAATCTGAAGGAGTTGGCATTTGCTGGTTGCTTGTAAGTCTTCATGGCATTCTACTTAATTATGAGGAATATCTTCTTTATTGTATTATTACTTTATCAGCACTAGTTTTAGGTTACAACTTTCATCTCCCAAACTACACCATGAATCAGGTGCATACAAAACAAATTTTCCATATAAAGCATAAGTCCAGAGCTGATTCTAATGTAACTAGAAGGTCTACAATAGAACAGTAATAAGACAATTATTTACCTCAATATCAGTACATGACAGCTGTCCTATGTGTTAATACAGCACCAATTTCCATCAGTAAAGGGGCTAGGGAAATGCTTATCCATCAATATAGGGCCAGCATTTTAAATGTGGATCTGTAACTTTTTATCTGATGAGAGTCCTGACCAAAATGAAACTATAACATGATATTGCAGGCTGCCAATAGCTTTGGTACCTTCTTGAAAGCCTTTTGACATCAATCCCTTAAATATTTATTTAATAATTGTATTCACTGGGGCACTGGCCTTATTGTTGTTATTTAAGTGTCACATTTGAGAGCATATTGTTAATAAGTTATTCTCTATATACTATAGGCCCTGTTTGTCACAATCATCTGATACCATAAATGTTTATACTCATAATATGACATATTATGCAGGTATAGATACATGATTTAGGGTGTAATTCTGACTACCTACGTTTGTGTCATCTATATGTAGGCAACTGACATCATCTTCCATTAAGACTATTGCGGGGAACTGCCCACAATTATCTTCATTGGACCTTCGCAACCTGAATAGATTGCGGGATTCAGCAATGAGACATCTTCGCAATGGTTGTCGGCTTATAAAAAAAATAAAGCTCCAAAGGAATACATTCAGGTATTTCTCTTCTGATGCTGTTTGGAGTGTTTTTATTCTTTAGCAGGATAATTTTGTTAGTATGTACATCCATGGCTTTATTTTTTTTAGATAATGATCATTGAATGAGTTTTATCTTTTCGACTAGTGTTCTACTTATCATCTTTTCAATAAGAATTTATTTCTTGGTATAGGGTGTCTTTTCAGTTTCTCTATGTAAAAAAAGGTTTTTAACCTTGTGAAAAGAAGCTGAATTTATCTCCCTTATTTTGCACACAATTACATATCCTGATTATACTGCTTGTGAAAGGAACCCACACTTTCCTTTGTTGGCTGGGACTGGGAGTCTAGCTGTCTAGGACAACCTGCTTGTTGGGTTGCTTCTGACCATACTCCCCAATTATGATGTTCATGTATCTGTTTGTTTTTACCTTGTAATTCCTTTTCTTTCTGTTACCAATTTTCAAATGAATTTCTCCTCTGTACTGTAAAGTCCTATAGCCTTATACGCTTTTCTGCCTGATTTTACTTACAGTTTGAGACAATTAATAACATAGTTGATGTGATGCGGATTACTTCATTCTTACTTATAATGCTGTCAAGATTCTATGTCCTACTGTAAACTCATTATTTATTGGAAATTCTGGTAGGATGTGATATTTGTAATCATGGTATTGGGGTCATTGTGTTTTGTTTGTTAGAATTGAGCTGCTACTTTTTTTTCTTTTGTAGATTAAGGAAACATTGAAATTACTATCTTGTCACAAAAAGTTGTTTTGTACTTTTCAAAGTCAACAATAGATAACTTTGACGGTTTGACCACCTATTTCTTTTGCATAAACCAAAAAAGTTTTACAGGTATAATATTATGAAAACTTTTGTTAACACAAACTTAGCCACTTCATTTCCATATGCCCATAACCTGCATTGTAAACAATAATTATGGCAAAAGTTAACTTGTTGACTGCACACATGCTAAAACAACATTCTTTTCTGATTGGAGGGAGTATAGAATACAAAGTTCAGTCTCAAAGAATCTCCTTGGTTTTTAGACCAGCAGGAATGGATCCCTCCTTAGCAATCTATAGTTCTATACAAGAGATGGTCAAAATCATATGGTAATATCCACATGTTTTTACAATTCCATAGTATTTGCCGTGTCAGCCTAACATATCAACACAGGTCAACACTGATGGATATTTTGGACCTTTATTTCATTTTAGCGTGACTCTTCATTAATACTTGGTACTCTTTTGTATTGATGAAGATGACACATGATTTTTGTGTAATGAGGTCGTGCAAAGTTGTTTCTGAGCTGTAATCATGTTGATTGTAATTGCAGTGATGAAGCTGTGTATCGGTTCTTGGAACAGTCTGGAGGATACCTAACTGAGTTATGCCTGAACAATGTTGAGAAGGTACTCTGCCCATTGTTCCATTTCTCTGCTTGGATGTGTGTGTGCCTGTCTCTGCGTTGTGTTGATTGGAATTAGGACATTGTATGGGTTCTTTTCATGCATTTCTTGGGATATGATGGTATACTTGAATTGACTCATTGAATTGCTGTACTGCAAAACTAATTGCTGAGTCACTGATGTTTAACTGCTGATGTATAATCATTTATTCCCTGGCTGTTAGCACATAATTGTTGACTTCTAATTTCTTATTTATTCATTTTAAATACTGTTGCGGTGTTGCCCTTGCCTCCATTTCCTATGCATTTGTTTGCTTCATGTAAACCTGTACCATTGGGTAGTTTTTCCTGCTTTCTTGGACTGTTGTATGATGCCTTATAAGTCTTGCACATATATATCTTATGCTTATAATAATATCTACTGCTTTTACTTTAGGCTGGAAATCTTACTGCTTATGCAATTGCTCGCAACTGTTCAACGCACTTGGAGGTTCTGGATCTTTCCTTTTGCCGTGAACTGACCAATGAAGCGTTGGGGCTGATTGTCGACAGCTGCTCATCATTGAGAATTCTCAAGCTATTTGGGTGTACCCAGGTATGATAACTTATTCACATATTAAGTACTAGGGCGTTAGTATATTCTTGAAACAAAATGTCAGGCGCTCTGCCTATTCAATGAAGTAGAGAGCAGAAAAACAGTAGTTTTTTTAGAAGAACAAGAGCAAGCAGAAACTACTGCTGTACTTGTACTAGCACCACACGCTATAGTGGCTGCTCATTGAGCCCATCTAGTGGATAGCCAAATACGCTACCTCTCTTAGATTCAAACCTTGCTGGATGAAATAACCTACTTGGGGTCCACTTTTGTGGTTCGTTTGGAGAAGTCCTATTGCACTCCTTTGCGTCATAATGTTTTTCTGCTATCCTTTAGTCTTGTGCATACCTACCAGGATTTTTCTTTCCTGGGCCACTACTAGGATGTTAGTATAAAGGCTCAGTTTTTTTTTGGTTCATGTTCTATGCTCGATCTTCTACTGCCAGCAGTTATGCAGAAAGAAACAAACCTCACTTAGGAGCTCGTATGGTTCATAGTTGACTAGGTAGTGTCATGAGCCATCAATTTCACATTTATTTTTATCTAACTTGATCTGTTCATGTTGCTTTCCAGATCACAGATGTTTTCCTGAAAGGCCACTCAAATTCGCTGGTTACAATTGTTGGGATAGAAGGGAATATACTGAAGCAAACGGGGAGTCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026873