BGIOSGA026884

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Revision as of 07:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026884| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026884, complete gene.| tag = OsI_294...")
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Gene Name

BGIOSGA026884

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026884, complete gene.

LocusTag

OsI_29452

Ensembl Transcript ID

BGIOSGA026884-TA

Ensembl Protein ID

BGIOSGA026884-PA

Length

5496

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:23637937..23643432

Sequence Coding Region

23643317..23643432,23642153..23642234,23641959..23642049,23641850..23641876,23641594..23641691
,23640454..23640526,23640252..23640369,23639997..23640114,23638146..23638285
,23637937..23638039

Genome Context

<gbrowseImage1> name=IndicaChromosome08:23637937..23643432 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:23637937..23643432 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGGGAGGAGGCGCCGCCGGGAGCGCTCAACCTGGCCGACTACGCCCCCGCCGGGGCCCGCACCGTCGACTGCTTCAGGCGCATCCGCAAGATCGGCGAGGGCACCTACGGTGAAGTATTTGAGGCTATGGATATTATAACTGGAGAAAGAGCAGCGCTTAAGAAAATCAAACTGGATGATGGCAAAGAAGGGTTTCCACGCCAAATCTTGCGTGAGATTAAACTATTAAAAAAGCTGGATCACGAGAACATCATCAGATTGAAAGAGATTGTAGTATCTCCTGGTACAGCACATGGAGCAGGAGGATCAGATGATTACATGTATAGGGGAGATATCTATATGGTTTTTGAATACATGGATCATGATTTGAAGAAAGTCTTGCACCACAGTACCCCATCCCAAGTCAAGTATTATATGGAGCAGTTGTTAAAAGGATTGCACTACTGCCATGTCAACAATGTACTTCATCGTGATATCAAAGGGGCTAATCTTCTAATAAGTGGTGGTGGTAAGCTGTTAAAGCTCGCTGATTTTGGCCTTGCAAGGCCATTCACTAGAGACGGAAGTTTCACAAATCATGTTATTACTCTCTGGTACCGACCCCCAGAGTTGCTCCTCGGTGCCACAAATTATGCTGAAGCAGTGGATATATGGTCTGTTGGTTGCATATTTGCAGAATTTTTATTGAGGAAACCATTATTTCCTGGCAGAACTGAGCAAGAGCAGCTATCAAAAATATTTGAACTCTGTGGATTTCCAAATGAGGAAAACTGGCCAGGAGTATCCAAACTTCCATTGTACAAGACTATTCATCCTACAACCCCAACGAAACGACGTCTGAGAGATATTTTTCACAACTTTGACTCTCATGCAGTGGATTTAATTGATCGCATGTTGATCCTTAATCCTACTGAGGTATGTTACCCTTTCTTATGTTTCAGTGTACAAGAATTCATATGA</cdnaseq>

Protein Sequence

<aaseq>MDGEEAPPGALNLADYAPAGARTVDCFRRIRKIGEGTYGEVFEAMDIITGERAALKKIKLDDGKEGFPRQILREIKLLKKLDHENIIRLKEIVVSPGTAHGAGGSDDYMYRGDIYMVFEYMDHDLKKVLHHSTPSQVKYYMEQLLKGLHYCHVNNVLHRDIKGANLLISGGGKLLKLADFGLARPFTRDGSFTNHVITLWYRPPELLLGATNYAEAVDIWSVGCIFAEFLLRKPLFPGRTEQEQLSKIFELCGFPNEENWPGVSKLPLYKTIHPTTPTKRRLRDIFHNFDSHAVDLIDRMLILNPTEVCYPFLCFSVQEFI</aaseq>

Gene Sequence

<dnaseqindica>1..116#1199..1280#1384..1474#1557..1583#1742..1839#2907..2979#3064..3181#3319..3436#5148..5287#5394..5496#ATGGACGGGGAGGAGGCGCCGCCGGGAGCGCTCAACCTGGCCGACTACGCCCCCGCCGGGGCCCGCACCGTCGACTGCTTCAGGCGCATCCGCAAGATCGGCGAGGGCACCTACGGGTAAGCGAAACTTCCCCTCGATCTCCGCCGCTCGCGCTATGAAATGTTTCGTGCGAAATCGCTGTCTCCCTTGCGGCGTGGTTGAGCCGCGGTGGAGTGTAGCGGTGTAGCCTTTGAGATCGTAGTGGGGGGCGGGATGTTCGTCTCACCCCCCTAGTTAGGGCTGTGGTTCCACGGAATTGTGAGAGGTCGAATTCTCGTCAAGTCAATGCACGCTTTGTGTCAATTGTTGCTGGCTAGTTTGCTCGCTTCAGAATGCGAGGCGACATTTTTGGTCTAGTTGTTTTCCCTATATTTAGTTACTCCTTTTCGTTTGAGCTCTAGAAATATGTAGTGGTTCGTTGGTTTCGGTTAGGTTTCGTTGGTTAATGTTGCACGTGGGGCATTTCATTTACAGCTGATTGCTGAATTCGCTAGTTATTTGGCAGATACGCTGACTAACCTGCAACAATGAGAAGTAATTTATCCACGGCGGCTAGCTAGTTGAGATTTTCACCATGATGAAAGAAAGAGGACATGTCTTAATGCTCGCTACAACACTAACCAATATAAATGATTCGTTCGAAACATCCCGTCTCTTCACACGGAGTAGCATATCTTTCTTAACATAGGCCTTTGTCCTGTACAAAGCAGGTTTATTAAAAATTCACATCTCATTTGCCGAAGTACATTAGGAAAAGATAAAGAATGTTAGAGACATGTAATTGATGGGTGAATTCGAATATTGTCTTGTTAGGTCCAATGACTTTGCAATTTCATCCATATTCCATAAGGAAAAAGAATCCAAGACTGCTCTTTCCTGTGTGCAGAAGAAATGAGGTTTCGCTTGATTGGCAACAGTCCAGATTATGCCACACTAGTATGGTTTGCAGTTTGCAGCTCACTGAGTCCAAAAATAAATGACGCAGTTGCAATATTTGTTTCCTTTTTATTTTCCTTAGGACCAATATATAATAACAATACATATTAAATATTTAAATGTGGTACCAGTTTTTTTATGAATTTACCTTCTTCACCATTGGCCAAGCTGGCAGTGCGCTAGTTTTACCTCTACATTTATTTATTTTTCCTAACAATCTCAGTGAAGTATTTGAGGCTATGGATATTATAACTGGAGAAAGAGCAGCGCTTAAGAAAATCAAACTGGATGATGGCAAAGAAGGGGTAAGCTTTATGATATCCACAAAGCTATGGCTACTCTTTCTAATGAGCAACCGTGTTCATTGAAGAACATTGCACTTCTCTGATCTGATCCATACTTTTGTAGTTTCCACGCCAAATCTTGCGTGAGATTAAACTATTAAAAAAGCTGGATCACGAGAACATCATCAGATTGAAAGAGATTGTAGTATCTCCTGGTAACAAATTTCTTCTAGCAATTTCAAGATGTCTAAGAGTACAGAAAACTGCATATTCCAACCATGTGTAAATATTTTTCAGGTACAGCACATGGAGCAGGAGGATCAGGTCAGTTACTTTATTCTTTGTTTCTTGCATTCTCCATTGATGTGCTAATGCTGATATATTTTATATGTTTTGTTTAATAATTTTTCATTCTGCTCAATTTTTTCTTCATATTGATCAATGCACAGAAATCATTCATAACCTATGCTAAAATTCTGCAGATGATTACATGTATAGGGGAGATATCTATATGGTTTTTGAATACATGGATCATGATTTGAAGAAAGTCTTGCACCACAGTACCCCATCCCAAGTCAAGGTACTCTGGTATATGTAGTTCTTCTATCCCATGTGTTTTAAGCAGGGGCGGAGCTAGAACGAAATGGAGGGGGGGTGCCACTTATTTAATTTACTCACTTTATATCGAGTTTAAGTTGATATGGGTGCCTAAATTTATATTGAGGGGGGTGCACATATGGTGAAAATAGGTAATGTTTAGTTACAAATTTTTTTTCACCGGGTTCCTGGGAACCCCTCCTAATGACTCTAGCTCCGCCCCTGTGTTTTAGAGAGATGCCCCCTTTCTTCTCGTACTTTCAAAGTGGACTATGGAATTTTGAGCTAAAGATTAAAGGAGCTATTGTCTTGGATTAGGAATTTTCTGCTTTCATCCTGAGAATTGAGAGATTTAAACTAGTAAATCACAAAACTTCCAAAATTGGTTCAAGTTCTCCAAGAATTCACCATAGGGGGGGTGGATCAATACCTGCTTTTATTTTTCCTGGACATGGATCCTGTCACCTCCTTCATCAGTAGCCTCAAACAACTAACTTGGCCTGGTTTCAAGTGTTTCCACACTACTGCTGCATGCCAGGGATGGATAGAGTGAGAGGCCATCTGTGGTTTGTGGACCATGGTGACATTTATGGGAATTGGGAAACCAGGTCTGGCAACCGTGACCAAGGAGGGCTGAGGGTTGCAGCAAGGAGTATGTGAAGGACAAATAAGTATTTGTGATGGTATCAAGGACGAGGGAGGTTGGGATAGTGGTAGGGATGTTGTCTTGTGCCTTGATGCCTATCGGATAGGATAAAATATTGCATGCAACAATTCACATGGTTAGCGTGGTACCTGCAGGTTCCAACAGAATAAAATTTCCACTAATATATACTTGCTGCAGAAATATGATTTAACTTGCTGTAACAATTAACATTGAACGGTAAGCTTACCAAAACAAAAGATTCTTCTCTCGCTCAGTTTCTCTTGTATAGTTTTATGCAAGCTGTTGTAAACAAATTAAGCTTCAGTGCTTCACCAAGCAGGATACAAGTTGATTGTACTCCTTAAGAACAGCCTATTCATTGTTGTCTATTTTCATTTCTGTAGTATTATATGGAGCAGTTGTTAAAAGGATTGCACTACTGCCATGTCAACAATGTACTTCATCGTGATATCAAAGGTTTGTTCTGTTTGAATGTATCTTCAACTTTTATATCTATGATCATTTTTATTCGACCCTCAGATTACTTGTTACCATTTATAGGGGCTAATCTTCTAATAAGTGGTGGTGGTAAGCTGTTAAAGCTCGCTGATTTTGGCCTTGCAAGGCCATTCACTAGAGACGGAAGTTTCACAAATCATGTTATTACTCTCTGGTACCGGTAAGTCGAATAAAGAATTAAGGACTTATGCTATTATATATCATCTTGTCCAACCCCAACATGTTTACTTGTGTTGTATTTTTTTCCTATCTCCTTTTGCTGATATCAATTTCCTTCATTCTACAAACTGCTCTTAGACCCCCAGAGTTGCTCCTCGGTGCCACAAATTATGCTGAAGCAGTGGATATATGGTCTGTTGGTTGCATATTTGCAGAATTTTTATTGAGGAAACCATTATTTCCTGGCAGAACTGAGGTATGATACATTCCTTTTACTTTTCCTTGTTTTCCTATTTCTATTATTGCTATTATTGAGATTGGGACTAGGGGATAAGATCAATGAATTACCTTGTACTTTTGATGTTTTCTAATACTCGATAATGCATGTTGAACGCCTAATATTACAACTTATGGTTTCATGTACAAACTGAACCTTTTTTTGTCTATAGCATGATGATTTTTTGGACGCGACTATGTGGCGCGTAGTAGTGCTTTAGCGCTAATGAGCGACCGTCCAAAAATAGAAACCCACGGGCTACAGCAATCTCCCGCACATGTTTTTCCAAAAAAAAAAAGAAAAAGAAAAGGGAATCGTAAGCAGTGACACAACGCACTTACCAAAAATAGAAGCGTTGCATCTTTTCCTCAGGTCCAGCTTTGTTGGAAAAAAGACATGTCATAATGCACTTTCACTTTTAGTACTATGCAGTCACATGCTAACAGAGTCTAGTACTTTTAAAATCTTTGGTGGCTTATATCTTTTAAACCGTATATTGTTTTTAAGATCCAATTGAACCATCGTAATCTACTGAACATATATGACAAAACTGAGTCCAATATTGAATATATTCAAATTATTTACTTTTGTAGCAGTGTTGTTACTTTAAATATTATGAAGAGTTACTTCCCTATACCAATATAGTTACTTTAAATACCATGAAGAGTTGCTTCTCTCTAGCAGTGCAGTTATTTCTAACACCGTAAAAGGTTAGTTCTATTTTTTCAGTTACTTTCCTCTATGAGTGTAGCAACTTTTAATAATATGAAGAGTTACTTCCTATATAAAATAAATTGCTTTCATCGAAAACAATAATCTATAGATATATACACAAACATATGGTTTACCTCAAATAAAAAAGTTATGTATTTACTTGTGAATCCACACTTTACTATGAAGATATTTCTTTTAACACATATATGTAATTACTTCTAATGCATTCTATAAAAAGTTGCTTCCATTGCAGAGCTTAGTTACTTCTACTGTTTAACTAAATTACTTTTAAATATTTCAATATATTTAATATTGTACTCATTTTATCATATGTTTTGAGTGGAGTTTAATGGTTAAAACAGATCTTAAAAATAATACATGGTTTGAAATATATAAGCCATCAAAAAATTTAAATAGATTAGTAGATGTACTACATGAGACTCACATCGTTGGACGGCTGTAGCAGGCGTCTCGCCGTAAGACTAATTCGCGCGCGCGCGCGGATTAGATTTTACCTTCACCGTGACGTTTCTTATCTGTCCAAATTTTTTTCAGTTAAGTTCTACTTTTACTCCTCTTCTCCATTTCAAAAGTTGTAATCTATGGTATATAGTACACTTGAAACATATGATCAGAAAGATATATGAAGGATAGATATGTTTCTTTGGAAAAATGCCATTCCACAAATATATCACGTGCACACATTATATTCTTTTATATTTTGAAATTGAGCAACTATTGATCCTGATTGCCCTTTTTGTTACGTTTCCTCATAGTGAAATGACATTATGCCAAATTTCTTTTTTGCATTTTTTTCTTGGCTCCAAGAACGACCCCTCCCCCTCATAAGCACTAAGCATGTCAACACAATGGTCTTTCTTTTGGATTCAGATATATTACTGCATGATATTTACAATCTTCATTTTGTATTTTATTTCCATATAAAACTCTGACAGAAGCTCGTATGTTGTTTTAGCAAGAGCAGCTATCAAAAATATTTGAACTCTGTGGATTTCCAAATGAGGAAAACTGGCCAGGAGTATCCAAACTTCCATTGTACAAGACTATTCATCCTACAACCCCAACGAAACGACGTCTGAGAGATATTTTTCACAAGTAGTCCACCTGCTATCACTTCTCATCCGTTTATCAACAGTAGTTACTGTTTTTCTATTAAGATTAAGAATAATGGAGTAATGTGGCTAAAAACTTTCTTCTACAGCTTTGACTCTCATGCAGTGGATTTAATTGATCGCATGTTGATCCTTAATCCTACTGAGGTATGTTACCCTTTCTTATGTTTCAGTGTACAAGAATTCATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026884