BGIOSGA026917

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Revision as of 07:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026917| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026917, complete gene.| tag = P0528B0...")
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Gene Name

BGIOSGA026917

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026917, complete gene.

LocusTag

P0528B09.35-1

Ensembl Transcript ID

BGIOSGA026917-TA

Ensembl Protein ID

BGIOSGA026917-PA

Length

6977

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22826512..22833488

Sequence Coding Region

22833311..22833488,22833062..22833216,22832704..22832892,22830197..22830549,22826512..22826722

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22826512..22833488 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22826512..22833488 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCGTGATCGACGGCGCCGTCGCTGCCGACGCCGGCGGCGCAGCCGCGGCGGTGGTGCAGCCGGGGAACGGGCAGACCGTGTGCGTGACCGGCGCGGCCGGGTACATCGCGTCGTGGCTCGTGAAGCTGCTGCTTGAGAAGGGCTACACTGTCAAGGGCACCGTCAGGAACCCAGATGACCCGAAGAACGCGCACCTGAAGGCGCTCGACGGCGCCGGCGAGCGGCTGGTGCTCTGCAAGGCCGACCTCCTCGACTACGACGCCATCTGCCGGGCCGTCGCCGGCTGCCACGGCGTCTTCCACACCGCCTCCCCCGTCACCGACGACCCCGAGCAGATGGTGGAGCCGGCGGTGAGGGGGACGGAGTACGTGATAAACGCGGCGGCGGAGGCCGGCACGGTGCGGCGGGTGGTGTTCACGTCGTCGATCGGGGCGGTGACCATGGACCCCAACCGCGGGCCCGACGTCGTCGTCGACGAGTCCTGCTGGAGCGACCTTGACTACTGCAAGGAAACCAGGAACTGGTACTGCTACGGGAAGGCGGTGGCGGAGCAGGCGGCGTGGGAGGCGGCGCGGCGGCGAGGGGTGGAGCTGGTGGTGGTGAACCCGGTGCTGGTGATCGGGCCGCTGCTGCAGCCGACGGTGAACGCCAGCGTCGCCCACATCCTCAAGTACCTGGACGGCTCGGCCAGCAAGTTCGCCAACGCCGTCCAGGCCTACGTCGACGTCCGCGACGTCGCCGCCGCCCACCTCCTCGTCTTCGAGTCCCCTTCCGCCGCCGGCCGCTTCCTCTGCGCCGAGTCTGTCCTCCACCGCGAGGGTGTCGTCCGCATCCTCGCCAAGCTCTTCCCCGAGTACCCTGTCCCCACCAGGTGCTCCGACGAGAAGAACCCCAGGAAGCAGCCGTACAAGATGTCGAACCAGAAGCTCCGGGACCTGGGGCTGGAGTTCCGGCCGGCGAGCCAGTCGCTGTACGAGACGGTGAAGTGCCTCCAGGAGAAGGGCCACCTGCCGGTGCTCGCCGCCGAGAAGACGGAGGAGGAGGCCGGCGAGGTCCAGGGCGGGATTGCCATCCGAGCATGA</cdnaseq>

Protein Sequence

<aaseq>MTVIDGAVAADAGGAAAAVVQPGNGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAGERLVLCKADLLDYDAICRAVAGCHGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLDYCKETRNWYCYGKAVAEQAAWEAARRRGVELVVVNPVLVIGPLLQPTVNASVAHILKYLDGSASKFANAVQAYVDVRDVAAAHLLVFESPSAAGRFLCAESVLHREGVVRILAKLFPEYPVPTRCSDEKNPRKQPYKMSNQKLRDLGLEFRPASQSLYETVKCLQEKGHLPVLAAEKTEEEAGEVQGGIAIRA</aaseq>

Gene Sequence

<dnaseqindica>1..178#273..427#597..785#2940..3292#6767..6977#ATGACCGTGATCGACGGCGCCGTCGCTGCCGACGCCGGCGGCGCAGCCGCGGCGGTGGTGCAGCCGGGGAACGGGCAGACCGTGTGCGTGACCGGCGCGGCCGGGTACATCGCGTCGTGGCTCGTGAAGCTGCTGCTTGAGAAGGGCTACACTGTCAAGGGCACCGTCAGGAACCCAGGCATGCACACACACGGACGCCATAAGCTACTACAGCTCGTTCGTTTTAGCTAGAGGCTTATAGTTATATGGTGTGTGTTGCGTTGCGTGTGCAGATGACCCGAAGAACGCGCACCTGAAGGCGCTCGACGGCGCCGGCGAGCGGCTGGTGCTCTGCAAGGCCGACCTCCTCGACTACGACGCCATCTGCCGGGCCGTCGCCGGCTGCCACGGCGTCTTCCACACCGCCTCCCCCGTCACCGACGACCCCGTACGTCCAACCACACAACCTCACCTCACTTCGCCTCGCCGCCGGCCGACACGGCGGCGACACCACCATTATTTTCTCGGTTTCTCACGCTGTTCATCATGGGCGCCCATGGCGTACGTTAATTAGTTGCGACTGACACGAGTGGCGCATTGCATGTGTCTTTTTGCAGGAGCAGATGGTGGAGCCGGCGGTGAGGGGGACGGAGTACGTGATAAACGCGGCGGCGGAGGCCGGCACGGTGCGGCGGGTGGTGTTCACGTCGTCGATCGGGGCGGTGACCATGGACCCCAACCGCGGGCCCGACGTCGTCGTCGACGAGTCCTGCTGGAGCGACCTTGACTACTGCAAGGAAACCAGGGTAGGTGCATCTGCAAAATCTAATCTAATTTCTTGATGATCTCTCTCTGCCCTTAATTGCACGTACTAATTAACCTTGGATACCTTTTGCTTCATCATGTTATTGTTACCTTTTTTGCTTTGGTTCTTTTCACTGAGAAAATGGAAAAAGAAAAAAAAACTTTGTATGGATATGAATTATTACATGCCACTACCTAGCTAGCTAGTACTACCAACCATGACTCAAAAGAATTATTATGTCTGGCTTTTGAGCCAACCAAGACAGGTGCTCATCGATCGATTGCCTGTGTCGACGTGAGCACTAAGGTTAAAAGCTGCTTCTTTTTTTTCTTTTTTTTTCTTTTTAACTAGCGACGTGCACCGGCAAAAGGACATGGTGAGATTAAGTTTGGGTGTTACTCACGTAAAGCATGTGACCAATCCGGATCGATATGATAGGAACACACGTAATAACACGCCATGTAGCTTAGCGTGACACCTCGGAGTTTTCTCTGCCTTACAGTGAAGGACTAGGAAGTAGTAACATGATTAGCTTGGACGTACGACTTATTTTATCCATTACAATATATCCACACTATTTTTTTATGGAAACGGCAATTTTAATATATTTAATTATATTTTATTTAGTTTATATATATTAGTATAACATAAGAATCTATTTTGGAAATTTTGGGAATTTAAGATAGTTTGTAGCTCACGATTGTTGTGGTTAATTAGTAGTTAAATTACTATTAATTAGTGGTTAATTATATGGAATTTTCGAACATGCATTCAGCATCGAAGCGTACAGTTGATCCAACAGACACACATGTGCACCGTAGAGGTTACAATAACTAGAAGTCCAACGCACCCAGCCACTGGAATTGAACGCCGGCACGTCATTTATTACCGATGAGTCAACGGTCAACCGTTAATTAATCAGTTGTAGTAGTAGCTGAACGCATGCATGCATGGTCACGATTTTCAAGAACCCAGTAATTGGCCTCTAATTTGTTAGTTTCTGGAAGGAAAAAAGGTTTACCTTGTGGACAGTTTTTGGCTTTTTGCATCGCAATCCGTCGGGAAAAATTCAAGTAGTACTTTTTTAACTATAAGAAAAACTATTTTTAAGAGCTACTGTACTTTTTTCCTTAGAAAGCAGATCACAGCTGAGTGATCCGGCAATATATACTCCCTCCATCCCAAAATGTTTGACGCTGTTGATTTTTTTAAACATGTTTGACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCCTATCATTTAATTTATTGTTAAATATATTTTTATGTATACATATAGTTTTACACATTTCATAAAAGTTTTTGAATAAGACGAACGATCAAACATGTTTAAAAAAATCAACGGCGTCGAACACTTTGAGAAGGAGGGAGTATCTTTCAAAGCAATATATGTTAGGCGTGAAGAAATTAATATTGTACGACGCCGAAGGTAACACATCTTTCATGTTTTAATTTAGCATACAAATATTAAAAACATTGGCATGTTTCGTCAGGCAAAAGAATAACATATGTATATACTGGCCTCGATCGTCGCAATTATGGAAATAAATCAAACACACGTGCATACGAAAGCGAAACCCAATTTAATTTCTTGTGATTTTGTAATATGAAACCGAAACTTGACTCCCAAACGTAAAACTGTACCGCGTCCCGCATAATTTTCTCGTGGATCCCCACAGAGTAATTAATTCTTCTCTGAAAGAAAAAAAACCTAGTACCGATTTTTCACGTCGTATTCCATCAGCATGTCCTAATTAATTCACCTAATATTTGTAATAGCTTTGCAATAACCTTCGTCAAAGTCAAGATACAACCACCAGAATCTTTCGGAAATATTTCTAAGGATAGAGTGACCGTACATTTGTAAGGGTAGGTGTGCTTCCATTGTGGATATACTGACCCAATTTTTTTAGAGACACTCAGAGGTAGAGTTTACGTGTATTCATTTGTAGGGATGAGTACGGACTCGTTGTGAACACGTTTGTATTATGTTTCTTTCTTCTTAAGGGTAGCTTAGGTTTCAGGACTTTGCGCTTCAACATAAGCTACGAACAATTATTTGCAATACTTAATCCTGTAAAGTAAAAGAAAATGAAAAAAATATATGAAATGATGGTGCAGAACTGGTACTGCTACGGGAAGGCGGTGGCGGAGCAGGCGGCGTGGGAGGCGGCGCGGCGGCGAGGGGTGGAGCTGGTGGTGGTGAACCCGGTGCTGGTGATCGGGCCGCTGCTGCAGCCGACGGTGAACGCCAGCGTCGCCCACATCCTCAAGTACCTGGACGGCTCGGCCAGCAAGTTCGCCAACGCCGTCCAGGCCTACGTCGACGTCCGCGACGTCGCCGCCGCCCACCTCCTCGTCTTCGAGTCCCCTTCCGCCGCCGGCCGCTTCCTCTGCGCCGAGTCTGTCCTCCACCGCGAGGGTGTCGTCCGCATCCTCGCCAAGCTCTTCCCCGAGTACCCTGTCCCCACCAGGTAAAATTAATTTCATCTTTATTACTACATTCGTTTCAGGTTATAATACTTTCTAACATTGTCCACATTCATATAGATGCTAATGAATCTAGTCACACATATATATATAGATTCATTAACATATACTCCCTCCGTACTCATAAAGGAAGTCGTTTAGGACAATGTTTAAGTCAAACTTTCGGAATATAAATCATGAATAACTCTCAAGTTGTTGGGTTTGAAAATATAAAAATTATATAAATAGATTTTTCTTGAAAAATACTTTCATAAAAGTATACATATATCACTTTTTAATAAATATTTTTATAGAAACAAGAAGTCAAAGTTGTGTTTTGGAGACCATGTCGCTGTCCTAAACGACTTTCTTTGCGAGTACGAAGGGAATATATGAATGTAGTCAATACTAGAAAGTCTTATAATATAAAACGGAGGAAGTACTTCTTAATTAATTAATTCTCCTAATCACGTCATCACTACATTACCACCATCATGCTAACTACTCTCTTCAGTATCAGCATTTACTGTGTGCTGTTAACTATAGTTGATCACTCGTTAATTTAACCCCGTATTAGGGTATGTTTGAGGGAGCTTCTAGCTGTTGCTGTTTCTCTCAGAATTAGAAACTTCTTTAAACAGTCCAGTTTTTTGTCTAGATTTTAAGAAGCTATAGTTTAAGAATCCAGAAAATGAACTAGAAGTTAGAAGCTATACCAATCAGCTGCTTCTCAGAATCTTAAGCTTTTCGAACATGCCCTTACTCCCTTAGTAGGAGTTGCGACTTCTCCTAATTAATCACGTCATTAGTACTACACCCCCACCACATCATGCAAACCACGTACTGGTATTCTCTTAATTGTCGGCATTAACGTACGCTGTGTTGTTAACTATAGTTATAGAAGTGAGAAATGCCTAGGGGTCTTCTGGCTAGCTCCACAAGGTGGTGGGCTAGACGACCTGGGTTCAAAGCCTCACCCTTCCTAATTATTTGATATTAGGTCCTTCCCTAATATTCTAGTTTTTTAACTATAGTTATAGAAGTAGTTGGTGCGTCTGTGGTCACGAGAAACAGAGTCTAAATTGATTATGAGTTTCATGTTTGCTTAATTAGTTCATTATTTATTCTCTAATCTCCAGTGAAAGGGGTGTTTAGCCATTAACTAATGACTAATTAGGTAGCAGCTGCTAGTAATTAATTTGGTGGGATTGGTAGGTAAGGATGGATAAGACTTGCCTACCAATTGCAGCATCAGCTCAGGTTCAGGTGAACCAACTCCGTTTCAGTCCGGTCTGACGCTAGCTAGCTTGAGTTTTTACTCAAAGTAAAACACCACACTCAAATTAAGGCCTCAAAGTAATTCTAAGCAAGTTCATCGCACTAGGTTACATACACATATGAACAAACAACATCGTGATCATCTACATGAGATCCAGAGATCGAGAGATTTGTGTTGGTGGCAAAAGTTGATCGATTTTCCATGCAACTTGTGCCACACAAATACAACCAAAATCTGCACACGTCCATGTCGACCAAAGTTGGTGTGAGACTGAGAGGGTTGAGATATATTCCCCTGTAAGCCACAACCAAACCCTCTGCTAATCTTCTACTCTGTCTCTGTCTCCTTCCTCTCGATCGCATCAGCGATGATCGATGGAGATCAGCATCATCGAGATCACCATCACGATCGATCGGGTAGAAATGCGTAGCATCAAGAGAGCGTTTGTTTTCTGAAAATTGAGTGTGGCGGTGTCGCGTTGCGATCCAAGTTGGTCCGCATCGTACGTGTCAGATTGTTCGTTTGTTTCTGTGGCTCTGCATTTTGTCGTCGCTGGCAAATCACACGTACGGCTGGGTACTACTAATAACCTTTTGAGAGTGTCATGTCATCGCCTATGCACGCATGACTTCAGAGTCCTGAAGTGTTAGTTTTTAGTTTGCATGTTGCGATCGTACATCATTTTGGAAATGGTTTTAGTGTCCGCCAACTGCTACAAGGATTAGTTGTCTAATGAACGTCATAAGATGGAAATGCTGATAATTGTTAGTATTTAAGGCGTTATAACTAAAGAGTACGTAGATGATGCAAATGCTAAGTCCTCATACAAAAATGCAAACCTTTCTTGACTTTGGGAATTAGCTGCTTGTGGGAAGAAGTCCTACCAATCTTGGACATTTAGGAAGGGGTAGGTCGGAATAGTGGAATTTTCTAGGAATTTTTCTTGGTTCTTTTCTCAGAGAATTTTTTTTCCTTAAACTGTTTGTTTATGAACAGAAAAAAAATTATTGCTTTAGTTAAGCCCTGCCTTAGACGTCTGGTGAGCAGTGTCTATGCAGCTCTTGAGTCCTAATGGGTCTCACCTAATCATATATTGTTTGTTAGCCACACACAAAGGGTTACTTGGGAGAAAGCATGACAATCCCTCTGCAATCATTTGCTCTGACTTCTTTCTAGTATCTCGACTCAGCTAGTGATATAATAGTATTAATCAAGGAGAAATTACGTCATGCTTGAGTATGTTAACTCCTTTTTTCTAAAACAAGAGGAAGCTTCACTCAGAAATACGCAAACAAGAAATAAATATTGACATCTAGGAGTACAAAATCAATCGGAATAGCCTGATTTCAATGCACAACCTGACAAGCAACCAAAACGCAGGAATATTCAGCTTTGCTTTTGTCAAAACGTCGTTACAGCGGGGTTGGACTAAGAGCACCCACCCCACTTGCTAATATTACTTTTCAACTGGTATATCCCGTAAAAACCTTGCTGAATTTGGCTCATATTTATTCAAGATCCTGAATTGTCCACATGATTGTTTCAAAGATACCATGCCTGACTACATGTACGTGAATAAACAGTCTAACTCGATGTGGTAATCTTACCAAACCTCTTATACTACCTTCAAGGGTCACCAATACGTAGCATGATGTCAGGTCAGGAACTGGGGATGCTTTAATTGGGTCCAAGGAGACCAAGGAATCTCAAGCTCTTCACAAGTCAAGCCAATCGTGTTTACACCTGAATTAAATCCCATATACTCCCTCCATTTTTTAATAAATGACGCCGTTAACTTTTTTTCACATGTTTGACCATTGTCTTATTTAAAAAATTTACATAATTATAATTTATTTTGTTATGGGTTGTTTTATCACTCATAGTACTTTAAGTGTGATTTATATCTTATACATTTGCATAAAATTTTTGAATAAGACGAATGGTCAAACATGTGAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGTAGTATAATTTTTCTAGTTAATCGAATTCCCCCAATTTGCGACCTGCCATAGGATTTGTTATGTAAATAGGTATATGTTAATGTTCCTTTTCATTATGAATCGTAATTGTATGGCCAACCATTACGGATCACAAGATAATGCGAGAAAAAAGAAACAAAATTTTCGTGCATTACCTCTGAACTGTTACCGATCCTGTGTTGCCATCAGGTGCTCCGACGAGAAGAACCCCAGGAAGCAGCCGTACAAGATGTCGAACCAGAAGCTCCGGGACCTGGGGCTGGAGTTCCGGCCGGCGAGCCAGTCGCTGTACGAGACGGTGAAGTGCCTCCAGGAGAAGGGCCACCTGCCGGTGCTCGCCGCCGAGAAGACGGAGGAGGAGGCCGGCGAGGTCCAGGGCGGGATTGCCATCCGAGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026917