BGIOSGA026922

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Revision as of 07:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026922| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026922, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA026922

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026922, complete gene.

LocusTag

OSJNBA0016C11.39

Ensembl Transcript ID

BGIOSGA026922-TA

Ensembl Protein ID

BGIOSGA026922-PA

Length

3782

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22659212..22662993

Sequence Coding Region

22662686..22662993,22662501..22662582,22662127..22662200,22661825..22661936,22661182..22661277
,22660995..22661096,22660823..22660897,22660479..22660619,22660269..22660385
,22660076..22660180,22659880..22659960,22659502..22659630,22659212..22659379

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22659212..22662993 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22659212..22662993 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTTTCTTTAAAATCAAGTGGCAGTTTTTGTAGCACACCGCCTCAGTGGCTGCATTCAACAAGGGATCGAATTTTATACGGTTATTCTCATTCAAATGCCAAAGAGTGCACTTGCAAGAAAACAAAAAGGCCTGCTCCACTGTGTGTTAAAGCTACTTCCACGAAAGTGGAATTAGATTTCAATGATCCATCTTGGAAGCAGAAGTTTCAGGAAGACTGGGATAAACGTTTTAATTTGCCACGTATTACAGACATATATGATTTGAAACCAAGGCCAACCACATTCTCACTCAAGAAAAACAGAAGTCCTGCAGGTGATGAAAATGGTACACCTATGGATAAATGGAATGGTTATGTGAACAGCGATGATCGAGCACTTTTGAAGGTGATAAAGTATTCCTCGCCTAACTCTGCTGGAGCAGAGTGCATTGATCCTGACTGTAGCTGGGTGGAACAATGGGTACATCGTGCAGGCCCTCGTAAGGAGATATACTATGAACCAGAGGAAGTAAAAGCTGCCATAGTTACTTGTGGAGGGCTCTGCCCTGGTTTGAACGATGTCATCAGACAGATAGTATTCACTCTAGAGACCTATGGGGTTAAGAATATTGTTGGGATTCCATTTGGTTATCGTGGATTTTTTGAAAAGGGCCTAAAAGAAATGCCACTTTCACGTCATCTGGTGGAGAACATAAATCTTGCTGGTGGAAGTTTTCTAGGAGTCTCTCGTGGAGGAGCTAAAACTAGTGAGATTGTAGATAGTATACAGGCCAGAAGAATTGATATGCTTTTCGTGCTTGGAGGAAATGGTACCCATGCAGGAGCAAATGCTATCCATGAAGAGTGCCAGAAGAGAAAGCTAAAAGTTTCAGTTGTAGCAGTTCCAAAGACCATCGACAATGATATACTTTTGATGGACAAAACATTTGGTTTCGATACGGCTGTTGAAGAAGCTCAGCGGGCCATTAATTCTGCATATATAGAGGCACGAAGCGCATACCATGGCATTGGTTTGGTCAAATTAATGGGAAGAAGCAGTGGCTTCATTGCAATGCATGCTTCCCTTTCAAGTGGGCAGGTTGATGTCTGTTTAATACCAGAGGTTCCTTTCACGCTTGATGGAGAATATGGTGTTCTACGACACCTTGAGCATTTGTTAAAGACCAAAGGATTCTGTGTTGTTTGTGTTGCTGAAGCTGCAGGACAAGAGTTATTACAAAAATCAGGTGCAACAGATGCATCTGGAAATGTGATACTTAGTGACATCGGTGTTCATATGCAACAGAAGATTAAGATGCATTTCAAGGACATTGGTGTTCCTGCTGATGTAAAATACATTGATCCGACATATATGGTTCGGGCATGTCGTGCCAATGCATCTGATGCAATTTTGTGCACTGTACTTGGACAAAATGCTGTCCATGGAGCATTTGCTGGGTTCAGTGGCATCACTTCTTGCATCTGCAACACGCACTACGTCTACCTCCCCATCACAGAAGTCATAACAGTACCGAAGCGCGTGAACCCTAATAGCAGGATGTGGCACCGTTGCCTAACGTCCACTGGCCAGCCTGATTTCCATTGA</cdnaseq>

Protein Sequence

<aaseq>MAVSLKSSGSFCSTPPQWLHSTRDRILYGYSHSNAKECTCKKTKRPAPLCVKATSTKVELDFNDPSWKQKFQEDWDKRFNLPRITDIYDLKPRPTTFSLKKNRSPAGDENGTPMDKWNGYVNSDDRALLKVIKYSSPNSAGAECIDPDCSWVEQWVHRAGPRKEIYYEPEEVKAAIVTCGGLCPGLNDVIRQIVFTLETYGVKNIVGIPFGYRGFFEKGLKEMPLSRHLVENINLAGGSFLGVSRGGAKTSEIVDSIQARRIDMLFVLGGNGTHAGANAIHEECQKRKLKVSVVAVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEARSAYHGIGLVKLMGRSSGFIAMHASLSSGQVDVCLIPEVPFTLDGEYGVLRHLEHLLKTKGFCVVCVAEAAGQELLQKSGATDASGNVILSDIGVHMQQKIKMHFKDIGVPADVKYIDPTYMVRACRANASDAILCTVLGQNAVHGAFAGFSGITSCICNTHYVYLPITEVITVPKRVNPNSRMWHRCLTSTGQPDFH</aaseq>

Gene Sequence

<dnaseqindica>1..308#412..493#794..867#1058..1169#1717..1812#1898..1999#2097..2171#2375..2515#2609..2725#2814..2918#3034..3114#3364..3492#3615..3782#ATGGCTGTTTCTTTAAAATCAAGTGGCAGTTTTTGTAGCACACCGCCTCAGTGGCTGCATTCAACAAGGGATCGAATTTTATACGGTTATTCTCATTCAAATGCCAAAGAGTGCACTTGCAAGAAAACAAAAAGGCCTGCTCCACTGTGTGTTAAAGCTACTTCCACGAAAGTGGAATTAGATTTCAATGATCCATCTTGGAAGCAGAAGTTTCAGGAAGACTGGGATAAACGTTTTAATTTGCCACGTATTACAGACATATATGATTTGAAACCAAGGCCAACCACATTCTCACTCAAGAAAAACAGGTTTTTTTTTGTGTCTTTAACTGAATTGGCTAGCTTTCCCTTAAGCTGCTAAAGATGTGAACAATACTTTCTTATGCAACACTGTCTGCTATTACTCGGGCAGAAGTCCTGCAGGTGATGAAAATGGTACACCTATGGATAAATGGAATGGTTATGTGAACAGCGATGATCGAGCACTTTTGAAGGTCAGTAAGCAGGCAAAATTAGCAGGCAGTGTTAGATTTTAATTTTCTTGTGTTTAATTTAAGTAGGATTTGTATCTAAGTCATCAAAGTTCAAAATGTTTGATTGCACAGATTTTGAAATTTCTATTAGGTTATGGAGGGAGTTATATTTTGTTTTACAGTGTACTCCACTGTATCTGCACTTACTTTTCTCCAACTAACATTTGGTATTTAAAGCAGGATGCAGTTCATAAAAGAACACCTTTACTTTTGTTCATTGCTGTGTATGCTTTGCACTTAACGTAATGTGCTTGCTTTTAGGTGATAAAGTATTCCTCGCCTAACTCTGCTGGAGCAGAGTGCATTGATCCTGACTGTAGCTGGGTGGAACAATGGTATATTTCTCATCACTTATGAGTTAGTAGCTCTTTCGATTCTGCTAATATACATTGTTTCTTCAAATATTTGATTACGTATTACATCATATCAGTTTCCACCTTCAGCGTTTAGCAGTTGTTAATTGTTTATTAGACTTAATTCGTTATATTCTTAAATGGTAAGGCGTTGATAAATAGTTTTATGTAGGGTACATCGTGCAGGCCCTCGTAAGGAGATATACTATGAACCAGAGGAAGTAAAAGCTGCCATAGTTACTTGTGGAGGGCTCTGCCCTGGTTTGAACGATGTCATCAGACAGGTCATTGTCTTTTAGCATTGTTCAAACATCTTTGAATTGCTCATACTGCTACCTCAAACATTTGATATGAATTCTGGTAGCTACATCCATTTTGGGATTAGGGTTATGAAGCATGCATATGAATTATCAGCAATAGTCAATACCCTCTAATTGCTTCACTTTTTCTTGGCAATGTCTAATTGCTGCACTTAGCTGCAAAGAAAATCAAAACACCAAATAATTAATTGCACTTCATGTACAGGTGGTTACACATCAAACATTGGTTTTTTAAAAATGCAGATTGTGAAGATAAAAGTGGGTAAAAATGCACCACTTTATGATACTGTATTTCTGTGTGTCCCTTGACCTTGAATCAGAAATATGAACATTCCTTTCATTCGAAATCCCCATGCTGTTTTTAGAACTATGCTCTGTAGTCTATTATGTACTTTGATTTCAACTGGTATTTTTTACTTATGCCTAGAATATGTGCTGATTCCTTCTGCAATTTTTAGCAAGAAATAATGTTGCATGTATGACTTACAAATCGTTTTTTCCGCGTTTGCAGATAGTATTCACTCTAGAGACCTATGGGGTTAAGAATATTGTTGGGATTCCATTTGGTTATCGTGGATTTTTTGAAAAGGGCCTAAAAGAAATGCCAGTAAGATACTTTTCTATATTCATAATTGTCAAAAACTCACTACTCCCCAATTTTTTTTCAAATTTCATTTGATAGTATCATCCAGCTTTCACGTCATCTGGTGGAGAACATAAATCTTGCTGGTGGAAGTTTTCTAGGAGTCTCTCGTGGAGGAGCTAAAACTAGTGAGATTGTAGATAGTATACAGGTAAGCACTCTGCACTGCAAGGTTTGATGCTGTATTTGTTATTCCTCTCTTTGAGGGAGGCTGAACTGTTTTCAAAATTATTATCTGATTATTGTAGGCCAGAAGAATTGATATGCTTTTCGTGCTTGGAGGAAATGGTACCCATGCAGGAGCAAATGCTATCCATGAAGAGGTTTTATGTCTTTAATTTTCATTCACTTCATCATTCAATTTTTATTTCCCAGTAAATCTTTCAGGACTCATTAGGCCTTCTTTTACGTGCAAACTAAAACAGAGGCCAATGTACCTATGTACAGAAGAATTTGCATAACATATTCCGTGTTCATCCTTCTTTGTTATAAAAAAAATTATATTCATTTTTCTCCACAATTGCAGTGCCAGAAGAGAAAGCTAAAAGTTTCAGTTGTAGCAGTTCCAAAGACCATCGACAATGATATACTTTTGATGGACAAAACATTTGGTTTCGATACGGCTGTTGAAGAAGCTCAGCGGGCCATTAATTCTGCATATATAGAGGTAAGTTAAATTACTGATATTAATTGTGTGTTAAGCTTTTCAAATCAGTTGTAGAGATGAAAGTTCAAGGGAATAAATCACTACTATAATTAGGCACGAAGCGCATACCATGGCATTGGTTTGGTCAAATTAATGGGAAGAAGCAGTGGCTTCATTGCAATGCATGCTTCCCTTTCAAGTGGGCAGGTTGATGTCTGTTTAATACCAGAGGTGTGTAAACATTACACTGTATTATGTTTGAGACTACCAATTCTCTTATGTACGATCTACCGATAAAAGCTTACTAATATGAATGAAGGTTCCTTTCACGCTTGATGGAGAATATGGTGTTCTACGACACCTTGAGCATTTGTTAAAGACCAAAGGATTCTGTGTTGTTTGTGTTGCTGAAGCTGCAGGACAAGTAAGCTAAACTTCAGAGTGATTTCTTCATGACTTTTTGGCTACTTTTGTTCCAGATACAGCTGGAAGCACGTGAGTCGAGAGCCTATGATTTAGTTATTCTACGTTCATTACAGGAGTTATTACAAAAATCAGGTGCAACAGATGCATCTGGAAATGTGATACTTAGTGACATCGGTGTTCATATGCAACAGAAGGTGTGTATGCGATAACCCTCTTTTACTTTGTGCTCTGATGCTGTAGTTTTAGAAGCGCATGGTTGTGCCACATTTTGTTGTTAAAATAGGTTTGCCTTACCGTCTCATTTGCTTTTTCTGTACATTCGTAGTAGTTCAGTTCTATTTAGATAGTTGAACCCAAGGCTTCCCTGCTTTTGTCTTCCCACGTTTCTTTTCTGTATTGTCAATCATACCATCATAATAGATAACATCAGTTAAAATTTTCAGATTAAGATGCATTTCAAGGACATTGGTGTTCCTGCTGATGTAAAATACATTGATCCGACATATATGGTTCGGGCATGTCGTGCCAATGCATCTGATGCAATTTTGTGCACTGTACTTGGACAAAATGCTGTAAGTCGCTTCAGGCATGCAGGCCTCTGACATCTATCTTTCGAAGTGTGGAGGACTAGAGGTAGCATTGCTGCCCATGTCATATGGTTGGTTAAATGAAAACTGCATGATGGTGCCTGCAGGTCCATGGAGCATTTGCTGGGTTCAGTGGCATCACTTCTTGCATCTGCAACACGCACTACGTCTACCTCCCCATCACAGAAGTCATAACAGTACCGAAGCGCGTGAACCCTAATAGCAGGATGTGGCACCGTTGCCTAACGTCCACTGGCCAGCCTGATTTCCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026922

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA026922&oldid=33179"