BGIOSGA026959

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Revision as of 07:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026959| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026959, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA026959

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026959, complete gene.

LocusTag

OSJNBA0077M12.125

Ensembl Transcript ID

BGIOSGA026959-TA

Ensembl Protein ID

BGIOSGA026959-PA

Length

5756

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21677743..21683498

Sequence Coding Region

21683480..21683498,21682134..21682186,21681715..21681809,21680325..21680430,21680154..21680238
,21679417..21679500,21678573..21678677,21677743..21678020

Genome Context

<gbrowseImage1> name=IndicaChromosome08:21677743..21683498 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:21677743..21683498 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGCGGGCGGCGACGCAGACTTGTCGTTCTTTGAATCGTTCCTCGCCTCCCAAATGTGCCAAAGGGGTTTTCCACGTCTTCCTACTCTCATCCATTCCCCGAGGGGGGCCTCTCCCACTGGCACTCTGGCAGCAAAGAAGGCTGCTGATTTTGCCAGATTCTACGAGCCTGGACCGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGCCTCTAAATCAGTTAGATGCGTCTGATTTTCATGGACAAGAGCTTACTCTTAAGTTGCACCGTGATGGAAAATTGAGCAGTTTGGAGAGTTCCTCAGGGAAATCTTATGATCTTGTTAGCTTTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCATCCGGACCAGAAGCAAAAGCTGTTGGGAAGATTGCACGTCGAGTTAGCTTAGTTCGTTATCCTGACCCTGAAGAACTGGAGAAGCCAGGTTTGGGGAGTCTCACTCCTAGCAGTAAGAAATCTGCAGGTTCTTCAAAGAAGACGAGGTCTCGGTTCTCTAGCGGGTCGAAGAACCGCAGCAGCCAAGGCTCAGCGCTATCGCTGGGCCAACAGAGTGCCGAGCCCACGCACAAACACAATCAGAAGAGAAAGGATGAGAGCAGTTTGGGGCACTCGAATGTATCGGGCAAGTCGGCTGAAGGATCCCAGGTTCGTGGTGGCGACAGTGGCACGACCTCGGAGGTTCCTCAGACGCCAGGGGAGAAATCCAAGAAGAAGAACAAGAAGGTTAGAATCGCAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAMAGGDADLSFFESFLASQMCQRGFPRLPTLIHSPRGASPTGTLAAKKAADFARFYEPGPAFEENSEEAMLDISQTESTELWLIQWPLNQLDASDFHGQELTLKLHRDGKLSSLESSSGKSYDLVSFAAQQPDATVFLPSGPEAKAVGKIARRVSLVRYPDPEELEKPGLGSLTPSSKKSAGSSKKTRSRFSSGSKNRSSQGSALSLGQQSAEPTHKHNQKRKDESSLGHSNVSGKSAEGSQVRGGDSGTTSEVPQTPGEKSKKKNKKVRIAE</aaseq>

Gene Sequence

<dnaseqindica>1..19#1313..1365#1690..1784#3069..3174#3261..3345#3999..4082#4822..4926#5479..5756#ATGGCGATGGCGGGCGGCGGTAAGCTCGAGAGAGATGGGAATGGGAGTTAGGTTTTTGGGTTTCTTTTTTGGATTTTTACAGGGCCTAATTTTGATTTTACACATGGGTGGCTTAATGCTCCTTATGCGAAAATCCTGTTTTCGCACGTGTTTCGGCTACCCACCTAGAGACATCTAGCCTCTGGGGCAGGCGGGTAAAGTGACCGCCTGCGTAAATGTCTTTTTGACCATACGCAAAAATTGTTTCTCTATTAGTGCCAAACTATAATTAAACCAGACATGTGATGGAGAATTGACAAGTGGCCCAAGGGTATTTCAGAACTTTCGTGTAGTTTCTTTCTCTTATTTAATCAGAAATGAATATCTTAATGAGCACGGTGTCCATGAGCGAATTTCCATATTTGCATAATGTCTCCCACAATAAGTCACTTCGTATGGTGTTCTACATGCTTAGAGATGGCAATGGGCCCCTGTTCACCATTTCCCCGCGGTGAATTTACATATTAGGTGGCGGGGATGGTTAATATATATCCACCGTGGTGAATGAAATGGTTAATATGTATTCACCATCGGGGATGGCGGGGGCAGGCCCCGTCCCCGCCCCTGTGGTGACCCGACTTTACTGTATAGAGGACTGATTCTAGACTTTTTAGACGTTTTGGCCCATAGTATTGAAGTAGGGTATCTAGACTTTTTAGATGTTTAACAGGGGTATATAGCAAAACCCTAGTCAAACCTCAGTCCACACCAGATCGAGCGCAGGCTGCGCAGCCACGCGCCCACGCCACTGGTTCCTCTCCTCTTCCTCCGGCTCTCCGCACGCCGCCACCGCCAGCCGTTCGCCTGTTCCAGACGCGCCGCGCGCGCGCCGTCGCCTCCTCTCGGCGTCGCCAGCTCGTCTTCGCGGGCTCGCTGCTGCTCTCGGCGCTCAGCGGCGCGGCGCGGCGTGGGCGCCGGGCGACTCAGCTTCGAGTCGCCTCGCCTCTCCACCTCTGCTCCTTCTCCGTCTCTCCGGCGACACCGCTCCTCAAAGAAACGTCGCCTCGCCGACCAGGATGAGGAGGTCTGTTCGTTTTTTTTTTCTCATTTTCTGACGCGTGTAGCAGTATCGTGATTATTTTGAGATAATATAATCATGGCACTTCATTGATCAAGTAAGTAGCATCTGTACAGACTACAGAGGACATCCCGGATACACTCCGAAAATTACGTCTCGAAAGACATTTGTGAGGAAAATTGCCTGGGCAGTCGTCACCTTGTAGCAGTGCTGCACAATCATGTTGACATATGCCACTGTCTTCTGTCCCACTAGACGCAGACTTGTCGTTCTTTGAATCGTTCCTCGCCTCCCAAATGTGCCAAAGGGTGACTGCTAACACTGCATTTTGGAGGCACGAACTCCCCTTCATGAAATCTGAAATCCATTGTCTCAGATTTGTTAATTCACCCCTGCATAAACTAATCGGGAAAGTCGATCTCACTTCGTCCCACACAGTAGCTGTGAAGGGGCACAGCAGGAGACACATATATCTGCTACCGCTGTTCGATCAGGCTGCCTCTGTTGCAGAAGACACATCTATCTGTTGCCAGAATCTGTCGCTTGTGGAGTTGAAAACCTGTCCGCAGGCAGTCGTGCATGTCCCTCTATAGATTGATCTTCATCTTCCCAGGGGCATTGATTTTCCATAGGGTTTTCCACGTCTTCCTACTCTCATCCATTCCCCGAGGGGGGCCTCTCCCACTGGCACTCTGGCAGCAAAGAAGGCTGCTGATTTTGCCAGATTGTAAGCCGAATGAACGGTGAAGACACCCAGTTTCTCATGAGACCAGTGTTTTGGTCTTATGAGACTTGTCACTTGTGGCTCCGTACAGCCTCACTAGAAGCTGCGGCCTATGAAGCAACAGAGGCAGCCCAAAAGAAAAAGGAATAAAATGAAAAAAAAATCAGAGGCGCGAGGCCTGCGCGGCGAGGCGGTGCACTCCTCTTCTACCTCGCGAGCCAGGGGGTTTTAGGGTTACGACTCACACCACCGCTGCGTCGAAGTAGCCTCCTCCTCCCTCGCCTGAGATCCATAGCCGCCCTCGTAGCATCGCCTCGCTCCATTGTTTATTGGTGCGTGTGAGGCGGTGGTAGCAATTGCTCTTCTTGTTAGCACATTGGGCACTTGGGCACTTGGATCGCTGGAGAAGCTGATGGGGCTTCGTTTGGTGGTGGAGATGGTGAAGGGATCATGAAGCATGGTCCGGTATAATCAACCTCGACCATTCCTTGTTGTTGGTTCGTCTTAGGAGCCAAAGGCCTTCATTTCCTCCCAATATAGATAGTCGATTACCTTGTGTTCCTGTAGGTTGTGGATGTTTGGGGATAAACTAGGCCATTCATGAGTTTGGGAGTGAAAGCTATAAAAATTGTTCATTTAGAGGAATCAAAATAGTTGCCTTTGGACTAAATGACTGGTAGGGTGATAGTCAAAGCCACATCTGAATAACAATTTTAAAAGCAGGAATGCTTTTGTTTGAGCATTGCATTTATCTACAGTAAAGCTATGCAATGTTTGTTCAGAACGAAACATATTAGGTGGATTTGCAACTTTATTGATATACTCCGTCCCAACATATAAGCATTTTTGGACTCTGACACGGTCTCCGAGATGCTACTTTGATCAACAATATCTATATAAAAGTAAAATGTTTTAAATAAAAAAATTTACATATTTTGATAGTTTGTTTAATGATAAATCTAGTAACATCAATTTTACATGATTACTTTTTTTGTTATTTTGCTATTAATAGTCAAAGTTAAAATTTTTTGACTTATCACTATGCTAAAAATGCTTATATTTTGGGACGGAGGGAGTATCAAATTTGTGGATTTGGTAGCTCTGATTCCTCTCTGAATAACAGATTAACAGTTATGCCTCAAATATGAGATAAGGGAGGTTGGATAATTATAGTTGTGGATTTTTGGATTGAATTCAGTAGCTTCTTTTGTTTCACTTATACACTTATTGGTAAGTTTTTGTATTGTGTGTAATTTATTTTAACTTTGCTGCAACCAACCATTGTAGCTACGAGCCTGGACCGGCATTTGAGGAGAACAGCGAAGAGGCTATGCTTGATATATCACAAACAGAGTCAACAGAACTTTGGCTAATACAGTGGCCTCTAAATCAGGTTATACGGATATTATTTTCATTATGTGCCATGTGGCATGCTGCACAAGGGATCTTGAATATAATGTTTTTCTGTGTTGCATGCAGTTAGATGCGTCTGATTTTCATGGACAAGAGCTTACTCTTAAGTTGCACCGTGATGGAAAATTGAGCAGTTTGGAGAGTTCCTCAGGTAAGATAATATTAGATGAATTATGTTGCACCTGATCGATTATGTCTTTTGAAGGTTTTTCAGCTTTCTGTACAGTTGGATTGAATGCAACCTGTATTAGCTCATGCAATCACACTTTTACCTTATTGATTAGTTTTTCCCAAAGAGGGCACCTAGACTTCTCATTACTAATCCCAAACAATGTTAATCCTATCAACGGAACTGCTTGCATTTCTATGGTCAAGCTTGCCTCTCATTTTTGTATGAAGATGAAGTCAATGCTGGTTCGTTGATGACTAGTAGTGTTTTGCAGAGCTCAAGTTGCTTGCTAATCTTTAGGCAACAAATGAACAAATTAATACTTATTAAATGTTTTTTTCAATAAAAATGGAATTAAGGTGCTATAATTTAGTTTACATATAGAAGTTTTTATGTTTAGTGGATGTTCAGAAGTTTGATTGGTGAAGTGAAATCTGTTCGCAGCTTCCTCGTTATCTGTGATTTGAAGCTAGATTGATAACATTCATCAGTAAGACTACTAGCAGTAGGCTACTAGGTTTTCTAACTTCTTTTTATTGGTTAAGATCGTCAGTTCGTTGCTTTTAAATTATTATGGCAATAACAATTTAAAGTTCTCCCAAAAGTTTGAGCTGTACTTGTTCTTAATTTGGCAGGGAAATCTTATGATCTTGTTAGCTTTGCTGCTCAGCAACCAGATGCAACTGTTTTCCTTCCATCCGGACCAGAAGCAAAAGCTGGTATGCTGAAATACCAACTTTGCAGTTTATTTCTGCAGTATTTTACTATTTTGCATGGATGCTGTTTTTACTTGTTATCGGTCTTGTTAAATTGAGCTGTTTGTTGGCATATTTGATTTTTGTGATTTTGGTCATCTATCATTTCTTCCTTTCCTGAGAGGCAGCTAATATTGTTCTTTGAGTAAAGTACATGGGCTGTCCCTAAACTTGTCTGGGTGTTATCTAGGTCCTTAAACTTCGAAAATACACTTTATAGGTCCCTAAACTTGTCATGGGTGTCACATAGGTCCAAACGGGTTCTAACCCGCTCCATGCGCTGACGTGACATTGCCACAGTGGTGCCTACGCCTCAGTGGAATCCACATGTGAAGCATATATAAAAAATAAAATTAAAAGCCATATTTTCTCCTCTTAAGGTAGACAGAAAAAAAGATAAAAATTCTAATGTAGAGAGGAGAAAATATGTTTTTAATCTTATTTTTTTTCTATGTGAACGACATGTGGGTCCAACTAACACGTAGATGCTATCGTGGCATGCCACATCAACACATGGAGCGGTTTGGAGCTCGTTTGGACCTATATGACACCCAAGACAAGTTCGAGGACCCAAAAATGCATTTTGAGAGTTTAGGGATCTAGATGGCACACCTGCACAAATTTAGGGACCGCTCATGCACTTCACTCTTGTTCTTTTAACTTACTGTATGCATATTTTTTAATCATAACAAAAAAATTCCAGTTGGGAAGATTGCACGTCGAGTTAGCTTAGTTCGTTATCCTGACCCTGAAGAACTGGAGAAGCCAGGTTTGGGGAGTCTCACTCCTAGCAGTAAGAAATCTGCAGGTGAGTTAATTTTCTCAGGCATCTTTTTGTAAGGATGCCACTCTTCTGCTGTCTATGGTAAATGTATTATATAGACTTGACAAGCATGATATGCCATTCCAGTTGGACTAGTCAATAACTGACATGTATAGGTTTAGCCTCCTGTTTTAACTAGAAATCCAGTATCACCAGATTAAACTTTGTAAGTGCATATTGCTGTTCAATCTTTTCGCATTGACAGTAATGAGGTGATGACCATACTATTTGTCTTAAGATTTTTTGGGCATCATTGAAAGTTGAGATTAGCCAAATTCCTGATTTATATTATGAAGACTCATGTCAGTGATGCAATGCATGCCCTTGTATTATAAGATCGAAGAACTGTTCTGAGAGAGAAATACTAAGCCCATCTCTGTAGTTTCTATTTCTTTTGATTAAGGTATGCACTTTCAATTAATAAGGTTTCCAGCCAACAGGCAACAGCTGAAGTGTTTTATCTTTTTTCTATCATAAATAGAACACTTTGGTAAACAGTAGTTGCCGTCACTGATCTGAATTTGTCCGGTCTTCCAGGTTCTTCAAAGAAGACGAGGTCTCGGTTCTCTAGCGGGTCGAAGAACCGCAGCAGCCAAGGCTCAGCGCTATCGCTGGGCCAACAGAGTGCCGAGCCCACGCACAAACACAATCAGAAGAGAAAGGATGAGAGCAGTTTGGGGCACTCGAATGTATCGGGCAAGTCGGCTGAAGGATCCCAGGTTCGTGGTGGCGACAGTGGCACGACCTCGGAGGTTCCTCAGACGCCAGGGGAGAAATCCAAGAAGAAGAACAAGAAGGTTAGAATCGCAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026959