BGIOSGA026983

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Revision as of 07:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026983| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026983, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA026983

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026983, complete gene.

LocusTag

OSJNBA0007M04.6

Ensembl Transcript ID

BGIOSGA026983-TA

Ensembl Protein ID

BGIOSGA026983-PA

Length

3476

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21023796..21027271

Sequence Coding Region

21026418..21027271,21023898..21026006,21023796..21023799

Genome Context

<gbrowseImage1> name=IndicaChromosome08:21023796..21027271 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:21023796..21027271 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTAGGAGTAACAGCCATCGCTTTGATGGGGGTGACGAACTCCCTCCTTGGGAAGCTCACCGTTCTACTTGGGAGGGAGTACAGCAAGCTCAGAGGTGTTCAAGCCGGCATCACATCCCTGAGAGATGAGCTGATCATCATGAAGGCTGCACTTGAGGACTTGTCACAGTTGGAGGACTGTAACTCACAGGTGAAGTTGTGGATGCATCAGTTGCGGGAGCTATCCTATGACATTGAGGACTGCATTGACATTTTTCTGCACAGCCTAGACCATGGAAGTGTTAGTGATGGGCTCATTAACAAGATTATCAGTTGGCTCAGGACACTGAAAGTGTACAGACACACTGGTAAGCAGATTACTGCATTGAAGGAACGTGCTGTAGAGGTAAATGACCGACGCAAGAGGCTAAAGCTTGATGTAGATATCCTTATTTTGAAGGCAGTGGCCATCGACCCCAGGTTACCAGCACTCTTTGAGGAAGCGGATAGACTAGTGGGAATCAATGGCCCAAGGGATGAGCTTGTCGAGTGGCTTACCAAGGGCAATGGTTTTGCACAAAATCGCAAGGTTGTCTCAATTGTTGGCTTTGGAGGCTTAGGAAAAACAACACTCGCCTGTCAGGTGTACCAAATGATAAAAAGCCAATTCGATTGCACAGCTTTTGTATCTGTATCACGGAATCCTAATATCAATAAGATCTTGAGAGACATACTTTCACAAGTTCTTTATACAAGCAACCTGATGTCAGATTATCAGAAGGATCACTTCTGGAGGATCAAGGAAAATCTTAATCAACCATTGGAAGATCACCAACTCATCAACATGATTAAAGAATATCTAAAAATTAACAGGTACTTCATAGTAATTGATGACATATGGAGTAAATCAGCATGGCAAGTTATCCAATGTGCTTTTCCATATAACAGCAATGCGAGCAGGATAATGACAACCACTCGCATTCAAGACGTTGCACAATCTTGCTGCTTTACACATGAAGATTATATTTATGATATTAAACCTCTTGGTAGTGACGACTCAAGAAAATTATTTTTGAAAAGGATTTTCGGCAATGAAGATAATCACCCTACAGAACTCAAAGAAGTAACTGATGAAATCCTAAGAAAATGTAGTGGTTTACCGCTGGCCATAATTAATATAGCTAGCCTATTATCAACCAAACCAGTTACCAAGCACGAGTGGAAAAAAGTGTGGAATTCTATCGGCTCCATGCTCAAGCAAAACCAAGATCTAGAAATAGTAAAGAGGATACTATTTCTAAGTTATTATGACCTACCTCATCAACTGAAGCTCTGTTTGTTGCATATAAGTGTATTTCCAGAGGATCATGTGATCAAGAGAGAGCGTTTGATATGGAGATGGATAGCTGAAGGATTGATTACTGAAGAACAAGGACTGAATCTGGAAGAAGTAGGAGAAAAGTACTTCAATGAGTTGGTCAATAGAAATATGGTGCAACCAGTGGACATCGACTATACTGGTAGAGCAAAGGCTTGCCGAGTGCATGATATCATGCTAGATCTCATTATATGCTTGTCAATTGAGGAGAACTTTATTACTATAATTGATGACCAGAAGTCCATGCTTTCAACTAACAAGGTTAGGCGTCTTTCCCTCCAAACAAACCATGAAAAAACCAATATATGGCTTGGAACCAACAGATTTTCTCAGGTTCGGTCACTTAGTGTCTTTGGTGATCTGAAGCAGATGCCCCCTTTCTTTGACCTACAAGTTTTACGAGTTCTGGATCTAGAGGATTGTTCTAGTTTGAAGGATGGAGACATCGAGAATATTGCAAGTTTATTTCAATTGAGGTATCTAAGTCTCCGAAACTGCCACATTAGCAGGGTCCCAGCACAAATTGGGAAGCTGCAACTTTTGCAAACACTCGACCTCAGAGGGACGAGAATAAAAGAATTACCAGAGACCATAACTCAACTACAGCAATTGGTTCGCCTATTGTTGGGACGCTTTGGTGTAAAAATGCCAAATGGGATCAGCAACATGAGATCTCTTGAGGAGCTAGTGGTGCTTGATGGAAGCAAGAACTCCGTGGATGTTGTGGTTGAGTTGGGTAATTTAACCAATTTGAAGGTATTTTCTATATATTGGCATCCTAATGGTGAAATTCACGATGAGGGAAGCTACACAAAGTCAATTATCTCATCACTCTGCAAGATAGGAGAGCACAACCTCCGATCCCTTCACATTACACACGGTTACAGTCTTTTACTGGATTTCTTGGTTGATTCATGGTACCCTCCTCCATGTCATCTTGAGATGTTTCGGATGGTTTCTCACTTTTATTTTCCTAGGCTTCCTAATTGGATGTCTTCCCTCTCTGAGCTCACATTTTTAGACATCAACGTAAAACAGTTTGGAGTGGAAGATATGAAGATCTTACAAAACATGCCTGCGTTGCTATCTCTTAAACTTTACCTTGAGGAATCCCCACAAGAAACACTAGTCATTAGTCGCTGTGGATTCCAATCTTTAAAGTTGTTCTATTTTTATCCAGTGAATGGTGAGCTTGGTTTGATGTTTCGAAAAAACAAAAAGGATGGATTGGGTTTGATGTTTGAAGAAGGAGCAACACCAAAGCTCCAGCGGCTTGAGTTTCGATATTGTGCTCATGATGCAATGTCTGCATATGGCGTTGATTTTGATTTCGGTATCAAGCAACTTACCTCCCTCAAGCATCTCGGTGTCAGCATTCATTGCAGAGGTGCAAGGAATTGGGAGGTGGAGGCTGCTGAGTCTGCAATTAGAAATGCAGTCTACCTTCTTCCCAACCATCCTACACTTGAAATGTATAGACTGTCAGAACATGAAATAGTGAAAGATGAGGAGGAATGGGATGATGATACTGGATATGATGGGGATGAGCACAGTGGATCAACAAGATGGGACCAAACAAATGAATATTTCCAGCAACAACTAAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MVGVTAIALMGVTNSLLGKLTVLLGREYSKLRGVQAGITSLRDELIIMKAALEDLSQLEDCNSQVKLWMHQLRELSYDIEDCIDIFLHSLDHGSVSDGLINKIISWLRTLKVYRHTGKQITALKERAVEVNDRRKRLKLDVDILILKAVAIDPRLPALFEEADRLVGINGPRDELVEWLTKGNGFAQNRKVVSIVGFGGLGKTTLACQVYQMIKSQFDCTAFVSVSRNPNINKILRDILSQVLYTSNLMSDYQKDHFWRIKENLNQPLEDHQLINMIKEYLKINRYFIVIDDIWSKSAWQVIQCAFPYNSNASRIMTTTRIQDVAQSCCFTHEDYIYDIKPLGSDDSRKLFLKRIFGNEDNHPTELKEVTDEILRKCSGLPLAIINIASLLSTKPVTKHEWKKVWNSIGSMLKQNQDLEIVKRILFLSYYDLPHQLKLCLLHISVFPEDHVIKRERLIWRWIAEGLITEEQGLNLEEVGEKYFNELVNRNMVQPVDIDYTGRAKACRVHDIMLDLIICLSIEENFITIIDDQKSMLSTNKVRRLSLQTNHEKTNIWLGTNRFSQVRSLSVFGDLKQMPPFFDLQVLRVLDLEDCSSLKDGDIENIASLFQLRYLSLRNCHISRVPAQIGKLQLLQTLDLRGTRIKELPETITQLQQLVRLLLGRFGVKMPNGISNMRSLEELVVLDGSKNSVDVVVELGNLTNLKVFSIYWHPNGEIHDEGSYTKSIISSLCKIGEHNLRSLHITHGYSLLLDFLVDSWYPPPCHLEMFRMVSHFYFPRLPNWMSSLSELTFLDINVKQFGVEDMKILQNMPALLSLKLYLEESPQETLVISRCGFQSLKLFYFYPVNGELGLMFRKNKKDGLGLMFEEGATPKLQRLEFRYCAHDAMSAYGVDFDFGIKQLTSLKHLGVSIHCRGARNWEVEAAESAIRNAVYLLPNHPTLEMYRLSEHEIVKDEEEWDDDTGYDGDEHSGSTRWDQTNEYFQQQLS</aaseq>

Gene Sequence

<dnaseqindica>1..854#1266..3374#3473..3476#ATGGTAGGAGTAACAGCCATCGCTTTGATGGGGGTGACGAACTCCCTCCTTGGGAAGCTCACCGTTCTACTTGGGAGGGAGTACAGCAAGCTCAGAGGTGTTCAAGCCGGCATCACATCCCTGAGAGATGAGCTGATCATCATGAAGGCTGCACTTGAGGACTTGTCACAGTTGGAGGACTGTAACTCACAGGTGAAGTTGTGGATGCATCAGTTGCGGGAGCTATCCTATGACATTGAGGACTGCATTGACATTTTTCTGCACAGCCTAGACCATGGAAGTGTTAGTGATGGGCTCATTAACAAGATTATCAGTTGGCTCAGGACACTGAAAGTGTACAGACACACTGGTAAGCAGATTACTGCATTGAAGGAACGTGCTGTAGAGGTAAATGACCGACGCAAGAGGCTAAAGCTTGATGTAGATATCCTTATTTTGAAGGCAGTGGCCATCGACCCCAGGTTACCAGCACTCTTTGAGGAAGCGGATAGACTAGTGGGAATCAATGGCCCAAGGGATGAGCTTGTCGAGTGGCTTACCAAGGGCAATGGTTTTGCACAAAATCGCAAGGTTGTCTCAATTGTTGGCTTTGGAGGCTTAGGAAAAACAACACTCGCCTGTCAGGTGTACCAAATGATAAAAAGCCAATTCGATTGCACAGCTTTTGTATCTGTATCACGGAATCCTAATATCAATAAGATCTTGAGAGACATACTTTCACAAGTTCTTTATACAAGCAACCTGATGTCAGATTATCAGAAGGATCACTTCTGGAGGATCAAGGAAAATCTTAATCAACCATTGGAAGATCACCAACTCATCAACATGATTAAAGAATATCTAAAAATTAACAGGTATGAAAGGATTTGATATATTTAGAATATATCACTAGGATCAAAAGTATAAATTTTTATACTACGGGAACGTGTGCAAACACTTGGTTTGATCTGGGTATAAGCTACGATTCCAAGTCAAACTTTCTAGCACTATAGGATGAACCAAGCAAAAAAGGCACAAAACCATCACGATCTATTTGATCCACATGAGTGAAGGTTGGAAGGAAACATGCTATATTGTTGCTTGCTCACATAGTCAGATGTGTATTTTTAGTGTGGTCAATTGGTCACCTATGAAAATGAAACTGAAGTTCTTTTTTCTTCCCTTCGAAAAAGCACAGTTTTATTTTTGGGATTGGATGCTACCGTTAAAGCTTGCTTCAATCCTACTAACACAGTAACAGTTTACCTTTTATGATTTGTATATAGGTACTTCATAGTAATTGATGACATATGGAGTAAATCAGCATGGCAAGTTATCCAATGTGCTTTTCCATATAACAGCAATGCGAGCAGGATAATGACAACCACTCGCATTCAAGACGTTGCACAATCTTGCTGCTTTACACATGAAGATTATATTTATGATATTAAACCTCTTGGTAGTGACGACTCAAGAAAATTATTTTTGAAAAGGATTTTCGGCAATGAAGATAATCACCCTACAGAACTCAAAGAAGTAACTGATGAAATCCTAAGAAAATGTAGTGGTTTACCGCTGGCCATAATTAATATAGCTAGCCTATTATCAACCAAACCAGTTACCAAGCACGAGTGGAAAAAAGTGTGGAATTCTATCGGCTCCATGCTCAAGCAAAACCAAGATCTAGAAATAGTAAAGAGGATACTATTTCTAAGTTATTATGACCTACCTCATCAACTGAAGCTCTGTTTGTTGCATATAAGTGTATTTCCAGAGGATCATGTGATCAAGAGAGAGCGTTTGATATGGAGATGGATAGCTGAAGGATTGATTACTGAAGAACAAGGACTGAATCTGGAAGAAGTAGGAGAAAAGTACTTCAATGAGTTGGTCAATAGAAATATGGTGCAACCAGTGGACATCGACTATACTGGTAGAGCAAAGGCTTGCCGAGTGCATGATATCATGCTAGATCTCATTATATGCTTGTCAATTGAGGAGAACTTTATTACTATAATTGATGACCAGAAGTCCATGCTTTCAACTAACAAGGTTAGGCGTCTTTCCCTCCAAACAAACCATGAAAAAACCAATATATGGCTTGGAACCAACAGATTTTCTCAGGTTCGGTCACTTAGTGTCTTTGGTGATCTGAAGCAGATGCCCCCTTTCTTTGACCTACAAGTTTTACGAGTTCTGGATCTAGAGGATTGTTCTAGTTTGAAGGATGGAGACATCGAGAATATTGCAAGTTTATTTCAATTGAGGTATCTAAGTCTCCGAAACTGCCACATTAGCAGGGTCCCAGCACAAATTGGGAAGCTGCAACTTTTGCAAACACTCGACCTCAGAGGGACGAGAATAAAAGAATTACCAGAGACCATAACTCAACTACAGCAATTGGTTCGCCTATTGTTGGGACGCTTTGGTGTAAAAATGCCAAATGGGATCAGCAACATGAGATCTCTTGAGGAGCTAGTGGTGCTTGATGGAAGCAAGAACTCCGTGGATGTTGTGGTTGAGTTGGGTAATTTAACCAATTTGAAGGTATTTTCTATATATTGGCATCCTAATGGTGAAATTCACGATGAGGGAAGCTACACAAAGTCAATTATCTCATCACTCTGCAAGATAGGAGAGCACAACCTCCGATCCCTTCACATTACACACGGTTACAGTCTTTTACTGGATTTCTTGGTTGATTCATGGTACCCTCCTCCATGTCATCTTGAGATGTTTCGGATGGTTTCTCACTTTTATTTTCCTAGGCTTCCTAATTGGATGTCTTCCCTCTCTGAGCTCACATTTTTAGACATCAACGTAAAACAGTTTGGAGTGGAAGATATGAAGATCTTACAAAACATGCCTGCGTTGCTATCTCTTAAACTTTACCTTGAGGAATCCCCACAAGAAACACTAGTCATTAGTCGCTGTGGATTCCAATCTTTAAAGTTGTTCTATTTTTATCCAGTGAATGGTGAGCTTGGTTTGATGTTTCGAAAAAACAAAAAGGATGGATTGGGTTTGATGTTTGAAGAAGGAGCAACACCAAAGCTCCAGCGGCTTGAGTTTCGATATTGTGCTCATGATGCAATGTCTGCATATGGCGTTGATTTTGATTTCGGTATCAAGCAACTTACCTCCCTCAAGCATCTCGGTGTCAGCATTCATTGCAGAGGTGCAAGGAATTGGGAGGTGGAGGCTGCTGAGTCTGCAATTAGAAATGCAGTCTACCTTCTTCCCAACCATCCTACACTTGAAATGTATAGACTGTCAGAACATGAAATAGTGAAAGATGAGGAGGAATGGGATGATGATACTGGATATGATGGGGATGAGCACAGTGGATCAACAAGATGGGACCAAACAAATGAATATTTCCAGCAACAACTAAGGTATGAGTTCCATACTTTGTACATAACCTATTCTTCTTAAATTGAGCAGTTTGTAATTTGTTATGTTAATTTATTTATGTCCTTGTTTTTGTTTACAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026983