BGIOSGA027014

From RiceWiki
Revision as of 07:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027014| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027014, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027014

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027014, complete gene.

LocusTag

OSJNBA0086F04.20

Ensembl Transcript ID

BGIOSGA027014-TA

Ensembl Protein ID

BGIOSGA027014-PA

Length

4257

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20338682..20342938

Sequence Coding Region

20342869..20342938,20341960..20342314,20340358..20340671,20339882..20340270,20338833..20339404
,20338682..20338736

Genome Context

<gbrowseImage1> name=IndicaChromosome08:20338682..20342938 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:20338682..20342938 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTTGATCAATAGAGGGGTCTTCTTCAAGATCTTGGCCTTCCTCTGCTTCATCAGATCATCTCAAGGAAGAAATCATTTTACCACATTGGATCTCCCTCCCCTACTGAAGGCAAGCAGTTTCTCCAGAATACAGCATGAGGCATATGACTACATCATTGTTGGAGGTGGCACAGCTGGATGCCCATTGGCAGCAACGTTGTCCCAGAAGTACAAGGTGCTCTTGCTGGAAAGAGGAGGGTCTCCTTACGGCAACCGGAACATCTCACATCTTGAGAACTTCCACATTTGCTTGGCAGATGACTCGCCAAATTCACCATCTCAGGGATTTATCTCCACTGATGGTGTCATCAATGCCCGGGCAAAGGTTCTAGGTGGTGGAACTAGTGTCAATGCTGGTTTCTACAGCCGAGCTGACCCAAGCTTTGTTCAAGACGCAGGCTGGGATGCAGAGTTGGTAAACCAATCATACCCTTGGATCGAAGAGAGGATTGTTTATTGGCCCAATATTACACCGTGGCAAGCTGCACTGCGGGACGGGCTGCTTGAAGCAGGGGTCTCACCTTACAATGGATACAGCTATGATCATCTCTTTGGAACAAAGGTCGGGGGAACAATCTTTGATGAGGCTGGGTACAGGCACACTGCTGCTGACCTCCTTGCTGCTGGAAATCATAACAACCTCAGGGTTCTCCTTCATGCTAGTGTGACCAGAATAATTTTCAACACAGAACAAGAGCACAGGAAGCCAAGGACCATTGGTGTTGAATTCAAGGATGAGAATGGGGGGCAGCAGCATGCCTTCCTTACCCGAAACAGAGACAGCGAGATTATCATCTCTGCTGGTGCAATTGGCAGTCCCCAGCTATTGTTGCTTAGTGGAATTGGACCCAGAAAGGAACTTAAAAAGCATAACATTTCTGTAGTCCTTCGCAACGAACATGTGGGTAAAGGGATGTCAGATAATCCAATGAATTCCATCTTTATACCTACCAAGGATGCCCCTAAGCAATCACTGATTCAGACTGTTGGAATAACCGACGGCGGGGCGTTCATAGAAGCCAGCAGTGGTTTCAGCCAGTCACCAGATAGTATCCAGTGCCACCATGGAATCATGTCCGCTGAGATTGGGCAGCTGTCAACGATTCCCCCAAAGCAAAGAAATCTAGATGCAGTCAAGAAGTATGTACATAAAAAATATAACCTACCCAAAGAAGTATTCAGTGGGGGTTTTATACTTTCGAAGATTGATGGTCCATTGTCTACTGGTAATCTAGTTCTTGTGGATACTGACATCAATAGCAACCCCACGGTTACCTTCAACTACTTCCAGCACCCAAAGGATCTCAGTCGGTGTGTCTATGGGATCAAGACCATAGAGAGAATACTGAAGACAAACCATTTCACTAATTTTACCCTCAATGGTGGTGGATATCCAATGGAAGTGGTGCTCAACATGAGTGTAACAGCAAACATAAACTTGATACCCAAGCACACAAATGACAGCACATCCATGGAGCAGTTTTGCAGAGACACAGTGGTCACCATCTGGCATTACCATGGCGGATGCCATGTGGGCAAGGTGGTTGACCAACAATACCGTGTGATTGGTGTCTCAGGCCTTCGTGTGATCGATGGGTCGACCTTATTTAGGTCACCAGGAACCAACCCGCAAGCCACAGTCATGATGATGGGCAGATACATGGGAGTGAAGATTCTAAGAAGAAGATTAGGACGAGCTGCTGGAGTATAA</cdnaseq>

Protein Sequence

<aaseq>MGLINRGVFFKILAFLCFIRSSQGRNHFTTLDLPPLLKASSFSRIQHEAYDYIIVGGGTAGCPLAATLSQKYKVLLLERGGSPYGNRNISHLENFHICLADDSPNSPSQGFISTDGVINARAKVLGGGTSVNAGFYSRADPSFVQDAGWDAELVNQSYPWIEERIVYWPNITPWQAALRDGLLEAGVSPYNGYSYDHLFGTKVGGTIFDEAGYRHTAADLLAAGNHNNLRVLLHASVTRIIFNTEQEHRKPRTIGVEFKDENGGQQHAFLTRNRDSEIIISAGAIGSPQLLLLSGIGPRKELKKHNISVVLRNEHVGKGMSDNPMNSIFIPTKDAPKQSLIQTVGITDGGAFIEASSGFSQSPDSIQCHHGIMSAEIGQLSTIPPKQRNLDAVKKYVHKKYNLPKEVFSGGFILSKIDGPLSTGNLVLVDTDINSNPTVTFNYFQHPKDLSRCVYGIKTIERILKTNHFTNFTLNGGGYPMEVVLNMSVTANINLIPKHTNDSTSMEQFCRDTVVTIWHYHGGCHVGKVVDQQYRVIGVSGLRVIDGSTLFRSPGTNPQATVMMMGRYMGVKILRRRLGRAAGV</aaseq>

Gene Sequence

<dnaseqindica>1..70#625..979#2268..2581#2669..3057#3535..4106#4203..4257#ATGGGTTTGATCAATAGAGGGGTCTTCTTCAAGATCTTGGCCTTCCTCTGCTTCATCAGATCATCTCAAGGTACATTCAATCTATTTCAGTTCATATGTTCCTTAAGCGTCAGCATGAATCATTTTCCTTCGACTTCCTTTCCACTAAAACGAATTCAGTAGGATTTTATGATGGTCAAAGGCTGGTTTCTCAGAGATGCTGGAATTTGATCACTCAAATTTCAATAAGCTGCTTCTATCAACCATAGCTTTCATCATGACATTTTCATATTTTTATAGCAAAAATGGAGTTCAGAATTTTGGCTGACACTCAGAATCATAACCATGCCATTTGCAACCAACTCCTGTTTATATTACTCTCTGATTTCACTATTTTCGTTAGCCAGAAATCTTAGGTATAGAGCGATGCAATAAGAAATTTGCAGGAAGAGGAGAGGGCGAAAAAGACATACCTTATAATCTCGGCCTGTAGTGAATATTCAGAAGAAACCTGATGAATGGCAATGCAGCATTTAGCTTAAACCAATTGAGATTTTCTTATGTATAAAGATATAAAAGGAAGTGATAAAAACCGTACCTGAAACTGGGTAGCTTCAGATAAAACATGAATACTTGTATTTGCAGGAAGAAATCATTTTACCACATTGGATCTCCCTCCCCTACTGAAGGCAAGCAGTTTCTCCAGAATACAGCATGAGGCATATGACTACATCATTGTTGGAGGTGGCACAGCTGGATGCCCATTGGCAGCAACGTTGTCCCAGAAGTACAAGGTGCTCTTGCTGGAAAGAGGAGGGTCTCCTTACGGCAACCGGAACATCTCACATCTTGAGAACTTCCACATTTGCTTGGCAGATGACTCGCCAAATTCACCATCTCAGGGATTTATCTCCACTGATGGTGTCATCAATGCCCGGGCAAAGGTTCTAGGTGGTGGAACTAGTGTCAATGCTGGTTTCTACAGCCGAGCTGACCCAAGGTAAAGAATTTATCATGTATATAGCATTCTACACATGGCCTGTCTATCTGTTCAAATTTATTTTTCACTTATCTCTATGAACTTAACCATTGTCGAAGAAGTAGCTTCCATAGCGTGCATAATAACATCAGATGAAAAATCAGCTGACAACTTAAGGCAAAAAACAGGGATAATTCTGAAATATTTATAAGAAGCTTAGCCAATTTATGGTGTGTTTGCATGTCGCGTTCTCTAACCAGCATTTTATACTTGTGTCTTAAGCAATTAACATAAGCTTCCACTCTGAAGGTCTACAGATAGCCAATCAAAGAAGCCTAAGTTGTACCGGAGTCACTCTAACTATTAGGCAGTGTATTGGCTACTTCTCCATGTTCATGAACTTACTAGTCCAACCAAGCTATCTCAGTTTCCATTTATACCCATCAAAGTACAAAAATACTACCTTGAAGACAGTCATAATGGGCAGACCAAAAGGCAAATCAGGGAACCTACCCATAACAAATTCCAACATGTACCACAACAGATCCCATAACTGTACCTCACTGGGGGAATTATTATAGACCTTATGCCTTTTGGTTGAGTTGTGAACTCAGGACAAGATCTTGAATCAAATTGGAGATACTCCAGTATAAGGATCGCAATGTTGGATTGAGTTATAGAATTGAATATCCTATCAGATTCTACAAACAATACATTGTTCCAAATTTGCATGCTTTTCAACAAGGATATTTTCGAATTGTACTTCAGAAGGTTTTAGTTTTGCCCCAGATGTACAAATAATAGCCGATCCCATGTATAAAAGGTGAAGCCTTGCAAGTTGCAACTTAAAGGTCAGCTGCAAGTAACTATTGTTTTTCTAGGGAAGTGAATACTTATTTTCAATTACTAGGATTGGTATAATTGTGACCATGATCCAAAATAATCTGCTAGAAGCCCATGAATAATATGATTATATCAAATTAAGATCCTTCCTATGTTCAAATCAGTTCAATAACTGTAGGGCATAAGACCTGAATTGAGATTACAAACAATTGGTTAGGAATGGCTTGGCACAGTTCATTAATATATGCCCCTTTTTTTGAAATTTTAATAAAGTAAGAATGTAATTGTTAAGGTAATTGCTGAAATCCCAACTGTAAGGTTAGCATAAGATGTGCTTTGCGCATAGCGTGAGCGGCTCTAATGGACTGATATTCTCATGTCAATATTACTTTTAGTGATACAGTAATGCTAATAATATATTAAGAATAGAAAAAAGGGTTCACTGATGAATGTGCTTGTCCTGTAGCTTTGTTCAAGACGCAGGCTGGGATGCAGAGTTGGTAAACCAATCATACCCTTGGATCGAAGAGAGGATTGTTTATTGGCCCAATATTACACCGTGGCAAGCTGCACTGCGGGACGGGCTGCTTGAAGCAGGGGTCTCACCTTACAATGGATACAGCTATGATCATCTCTTTGGAACAAAGGTCGGGGGAACAATCTTTGATGAGGCTGGGTACAGGCACACTGCTGCTGACCTCCTTGCTGCTGGAAATCATAACAACCTCAGGGTTCTCCTTCATGCTAGTGTGACCAGAATAATTTTCAACACAGAACAAGGTAAGAATTAATCCAAGGCAGGCCTAGCTCTTATAATCCCTATCCACTTTAACAGCAGACGCGATAGTAACATCATCTCTTGCACAGAGCACAGGAAGCCAAGGACCATTGGTGTTGAATTCAAGGATGAGAATGGGGGGCAGCAGCATGCCTTCCTTACCCGAAACAGAGACAGCGAGATTATCATCTCTGCTGGTGCAATTGGCAGTCCCCAGCTATTGTTGCTTAGTGGAATTGGACCCAGAAAGGAACTTAAAAAGCATAACATTTCTGTAGTCCTTCGCAACGAACATGTGGGTAAAGGGATGTCAGATAATCCAATGAATTCCATCTTTATACCTACCAAGGATGCCCCTAAGCAATCACTGATTCAGACTGTTGGAATAACCGACGGCGGGGCGTTCATAGAAGCCAGCAGTGGTTTCAGCCAGTCACCAGATAGTATCCAGTGCCACCATGGAATCATGTCCGCTGAGGTTTGGCATCAATTTCAAAGACTTTACTTGCATAAAATTTTGAATTCTTTATAAGCATCATGGGGTGTTGGTGTATATCATACAAAAGCTTGTGTAGTTGTGTACATAAACAACATCCACATCAGCACTCTCAGAAAACAACACACGCTAAATTAGCTTGTCAAAAGCCATCTTTAGTTTTTGGTAAGCAACTTCATTAAGCTTATCTTCAGGAGCCCAGGATTAAGATATCAGAGGAACCCAGAATCTACCAACATGTACACAGAAATTCATCTCAATGGTTTTAAACTAGAGTAAATTAAGGTTTTAAAGCAGAGTTTCTTCTGGGATTATTTATGGACAAAAAATTGTAATAATAAGAAACTTCTTTGAATTTGTAAAAGCCAAAAAGAAAAAAACGTTAAGCTTATTTACTTTTGAGAAGCATGCTAACTTTCAAGCTTATCATCCCTCATGAATTTTGTCACTGCAATGTAGATTGGGCAGCTGTCAACGATTCCCCCAAAGCAAAGAAATCTAGATGCAGTCAAGAAGTATGTACATAAAAAATATAACCTACCCAAAGAAGTATTCAGTGGGGGTTTTATACTTTCGAAGATTGATGGTCCATTGTCTACTGGTAATCTAGTTCTTGTGGATACTGACATCAATAGCAACCCCACGGTTACCTTCAACTACTTCCAGCACCCAAAGGATCTCAGTCGGTGTGTCTATGGGATCAAGACCATAGAGAGAATACTGAAGACAAACCATTTCACTAATTTTACCCTCAATGGTGGTGGATATCCAATGGAAGTGGTGCTCAACATGAGTGTAACAGCAAACATAAACTTGATACCCAAGCACACAAATGACAGCACATCCATGGAGCAGTTTTGCAGAGACACAGTGGTCACCATCTGGCATTACCATGGCGGATGCCATGTGGGCAAGGTGGTTGACCAACAATACCGTGTGATTGGTGTCTCAGGCCTTCGTGTGATCGATGGGTCGACCTTATTTAGGTCACCAGGAACCAACCCGCAAGCCACAGTCATGATGATGGGCAGGTAAAGGCAAAAACAAACTATAGTACTCTCCTTTAATCTACAAAATTAAATTTTAAGGGTTGATCTTTCTTTTGTCATATTGTCTTTCATGGTCAGATACATGGGAGTGAAGATTCTAAGAAGAAGATTAGGACGAGCTGCTGGAGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027014