BGIOSGA027071

From RiceWiki
Revision as of 07:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027071| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027071, complete gene.| tag = OsI_290...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027071

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027071, complete gene.

LocusTag

OsI_29024

Ensembl Transcript ID

BGIOSGA027071-TA

Ensembl Protein ID

BGIOSGA027071-PA

Length

6306

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18468281..18474586

Sequence Coding Region

18474488..18474586,18474255..18474398,18474044..18474146,18473672..18473931,18473387..18473566
,18472707..18472785,18472539..18472620,18471510..18471572,18471290..18471428
,18470214..18470443,18469001..18469079,18468737..18468892,18468281..18468391

Genome Context

<gbrowseImage1> name=IndicaChromosome08:18468281..18474586 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:18468281..18474586 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTATACCCTTCAACCACGCGTATGCATCTCCAGCTCCAGGTCATCCATCTCCCCTAAAGCTGCTCGTCTATCTCATCAGAAAGCATCCACTGGAAAGCCGTATTTCAGGGAGATTCAGGTGCATCTAAGCTCCAAACTGGGAGAGGCATCAAATGCCATGAACAGTACTTACCAACAGCTGCTGGATTCATTTGTTGATCACACCTTCACATTCAAATGTCAACCTTTGCGTCCCACTGAGAGCAATTTTGCACCAGTCGACGAGATCGGGGAGATCACACGGGTTATAGAGATTGAAGGAGAGATTCCAGCAGATTTTCCTGAGGGTGTCTACATAAGAAATGGTGGAAACCCTCTCTATGGAGCCCTCCAATCTGTTAGTTCCATTTTCGGGCAGTCCCATAACATCTGGCTGGAAGGAGAAGGCATGCTCCATGCTGTATACTTCTGCAAAAGTAATAACAGCACATGGTCAATCTCGTACAATAACCGCTACGTGCAATCTGAAACATTTAGGATTGAGAAAGAACGTCAGAAACCATGCTTTCTCCCTATGACCGATGGGAACCCTCCCGCCATGCTCATCGCCTCTGTTCTTAACACACTGAGATTCCGAAAGGTAATGAAAAGCATGAGCAACACTAGCGTGTTTGAGCATGCAGGGAGAGTTTATGCAGCATCAGAGGATGATGTTCCCCACGAGGTTGACTTGCATAACCTCAGTACACTACGCAGCTGGCATCTCGGTGGTGAATGGAAGTTGCCATTTACAGCACACCCCAAGGTAATCCCTGGGTCAAAAGAGATGGTCATTTTCGGGATCAATGCGGTACAGCCTTTCCTAACAGTTGGCATAATCTCAGAGGATGGAGAAAAACTTAAACAAAAGGTTGGTCTCAAGCTAGACAGATGCACATATTGTCATGAAATTGGGGTCACGGGGACGTACAACATCATCATAGATTCACCACTTACCCTCAACCCAACTAGGATGCTAAGAGGGGCTCCAGTGCTTGAGTTTGAAGAGGAAAGCTATTCAAGAATTGGGGTTATGCCCCATTACGGTGATGCAGACTCAGTAATATGGTTTTATGTAGAACCATTCTGCACATTCCATCTTGTCAATTGCTTCGAGGAAGGTCATGAGGTTGTAGTAAGGGGATTTCATGTACCAAGTTCTGCGATTATGGGTCCAAGGCAGAAGAACATGGTTATGGATACTTCCAGTCAAGAACCAAATGAAGAGAACTTTTCTCGCTTGTATGAATGGAGATTGAACCTAAAAACAAGGACTGTTGCAGGCAAATACTTAACTAGCTTAGATGTTGCCTTGGAATTCCCAGTTATCAATGATAAATTTTCTGGACTACGCCATAGTCTAAATCTTGCAGCTCGACCAAAGTTTATTGGTTTTGCAAAACTTTGTCTTGAAGAAAAACAAAACATAGCTACTAAGATAGACAGAGAAGATCTAATAAAGGTAGAGTATCATCAGCTAGCAAAAAATCAATTCTGCTCAGGAGTAACGTTTGTGCCTAAGGCAGCAGGTGCGCATGAAGATGATGGCTGGATAGTTTCATTTGTTCATGATGAGGAAACCAATATATCAAAAGTACACATCATTGATGCCCGAAACTTTGAGAGTGAACCTATAGCCAAGATAATATTACCACAAAGAGTACCCTATGGTTTGCATGGAGCATTCATTACAAAAAGAACATGA</cdnaseq>

Protein Sequence

<aaseq>MYTLQPRVCISSSRSSISPKAARLSHQKASTGKPYFREIQVHLSSKLGEASNAMNSTYQQLLDSFVDHTFTFKCQPLRPTESNFAPVDEIGEITRVIEIEGEIPADFPEGVYIRNGGNPLYGALQSVSSIFGQSHNIWLEGEGMLHAVYFCKSNNSTWSISYNNRYVQSETFRIEKERQKPCFLPMTDGNPPAMLIASVLNTLRFRKVMKSMSNTSVFEHAGRVYAASEDDVPHEVDLHNLSTLRSWHLGGEWKLPFTAHPKVIPGSKEMVIFGINAVQPFLTVGIISEDGEKLKQKVGLKLDRCTYCHEIGVTGTYNIIIDSPLTLNPTRMLRGAPVLEFEEESYSRIGVMPHYGDADSVIWFYVEPFCTFHLVNCFEEGHEVVVRGFHVPSSAIMGPRQKNMVMDTSSQEPNEENFSRLYEWRLNLKTRTVAGKYLTSLDVALEFPVINDKFSGLRHSLNLAARPKFIGFAKLCLEEKQNIATKIDREDLIKVEYHQLAKNQFCSGVTFVPKAAGAHEDDGWIVSFVHDEETNISKVHIIDARNFESEPIAKIILPQRVPYGLHGAFITKRT</aaseq>

Gene Sequence

<dnaseqindica>1..99#189..332#441..543#656..915#1021..1200#1802..1880#1967..2048#3015..3077#3159..3297#4144..4373#5508..5586#5695..5850#6196..6306#ATGTATACCCTTCAACCACGCGTATGCATCTCCAGCTCCAGGTCATCCATCTCCCCTAAAGCTGCTCGTCTATCTCATCAGAAAGCATCCACTGGAAAGGTTGGCAATCTTGCACACAGCAATAGATGTGTGATCCTTCAGTGAGTGAGAAATGTAAACCAAATACTCTGCTTTGTTTCATGTTTCAGCCGTATTTCAGGGAGATTCAGGTGCATCTAAGCTCCAAACTGGGAGAGGCATCAAATGCCATGAACAGTACTTACCAACAGCTGCTGGATTCATTTGTTGATCACACCTTCACATTCAAATGTCAACCTTTGCGTCCCACTGAGGTAAATACAAATGGTTCGATTCTGTTCCAGTTAACTTGCTGACAAGGAGCTGAAAAACGAGCAGAATGCAAAATATTATATGCATACCTTGTGTTGGCACTTCTATAGAGCAATTTTGCACCAGTCGACGAGATCGGGGAGATCACACGGGTTATAGAGATTGAAGGAGAGATTCCAGCAGATTTTCCTGAGGGTGTCTACATAAGAAATGGTAATTCACATATGCAAGCTTATTAGTAATACGTTTGACCGAATAAGATTTCCTTTTTTTTCACAAAATGTCATGGAACAAACCCAGATGCTCTGATGATTGTGGAATGCAGGTGGAAACCCTCTCTATGGAGCCCTCCAATCTGTTAGTTCCATTTTCGGGCAGTCCCATAACATCTGGCTGGAAGGAGAAGGCATGCTCCATGCTGTATACTTCTGCAAAAGTAATAACAGCACATGGTCAATCTCGTACAATAACCGCTACGTGCAATCTGAAACATTTAGGATTGAGAAAGAACGTCAGAAACCATGCTTTCTCCCTATGACCGATGGGAACCCTCCCGCCATGCTCATCGCCTCTGTTCTTAACACAGTATGGTGCCTGCTGCTATTACTACATCGCATTTCTTCTGTAATTTTTTTGGGATTGTCGCAAACATTTTGGAAATGCTATATGTTGACTGTTGAGTTTGTGCAGCTGAGATTCCGAAAGGTAATGAAAAGCATGAGCAACACTAGCGTGTTTGAGCATGCAGGGAGAGTTTATGCAGCATCAGAGGATGATGTTCCCCACGAGGTTGACTTGCATAACCTCAGTACACTACGCAGCTGGCATCTCGGTGGTGAATGGAAGTTGCCATTTACAGCACACCCCAAGGTCGGTGGTCCTTTTGCCTAGTTCTTCAAAATGTTAAGCTAAATAGCTTACACATCAGATTTTTATGGCCCGTAAATAGGGAGTACCATGACCATAAATAAAGTAATGAGAATGCAATGCATGTGCTTAGATTAACTGACAAGCATCACATAGCCGATTTGACATTGGAGATGAACACCAGAACCAAGCATAGCATCTATGAGTACTGTCTATAAGTTAATTCTTACATGGAAACAGTTAGATTGTTTTCTGTTGGTAAATTAGTACAGCATTACTCTGCTTCAAAACTAAGAAGATAGCTAAAGATTATTGCAGAAATATCCATGGAAATCTGTAACTTTTAAACATGTTTCCACCACAACAGATGGCCACCACATCATTTAAATAATGACAAGCAAAAATATACAAATCAAACTGAAGGTAGATACAGCCAAAATTCAGTCCCTATAAGTTTCATTCATCTGAACTTTCCAAGTTTTCCAATAATAACAGTTCAACTACTGTAGTTAAAGCCACTAGTGCTCCATTGTTTCATTTGTACATCTGTTAGCTTTCTTTTGTCATGTTTTAGCTATGCAATGCATCATGTCCACGGTAACAGGTAATCCCTGGGTCAAAAGAGATGGTCATTTTCGGGATCAATGCGGTACAGCCTTTCCTAACAGTTGGCATAATCTCAGGTTATCTACTTTCATAATTCCATTGTCTTCTGCTACATCTCCTGAATAAAAATGGGGTCATATGCTTAACTTCATAAACATCACAGAGGATGGAGAAAAACTTAAACAAAAGGTTGGTCTCAAGCTAGACAGATGCACATATTGTCATGAAATTGGGGTCACGGGGACGTAAGTTTCTTGCCTACAGCTAGCTATATTTGTTTTTATGGCTGCTCTTCTGATTTCATTAGATATTTAGATGCATGTAAAATTTTGCTCTTATTTCAAATAGTATATTTATTTAATTTCAAGAATTGCTCTTATTTCAAATAGTATATTTCAAGAAATGGAAGATACTAAACAGCACATTTCACATAGACTGATGCACAAGAAAACAATCAATCTTGGTCGCTTCTTGAGGATTCTTAATTTTTATTTTTTTTCAACAGGGAATTTTTAAGTAAAAAATAGCAATTTTATTGTGAAGAACAGAGGAATGGTGTCTTATGAACTAGATTAGAACCAACTGGAAGCTAGTAGAAAACCATCATATTCGTTTCTTTTTCATGATATGAAGTACACTAATTTTGTCTGGTTTACCGTCATTTACAAATTTCTTAAACATTACACAGAAATAAAACAACAATGTCTTAACTCACATGGGATGGACATGGACTCCATAAAAAATCTATTAGAATTTGAAACACAAAGCACTATTAATCCCTAAATGATATATATGGAATAACCAAATCCATGGATCCCAGTTATGGCAGCAACCAGCTGAGTTGCTCTGCTACTAACTGTAGGATTGAGAACTCACATTCTAACTGTGCCTAATTCAATGCTTGCAATTAGTCAGCAGCTCAGTCAATATTTGTCTAGCAGTTTTCTATTGAACTGTACAGAATAACCAAAAAAATAATATATTCATTTTTTACTATGCCACATAAAATAAGCGATAACTTCATTAAAGTCAAAATAGTTCTATTAAGTCAAGTTCTCTTGAAGCTCCACTTTTCTTATATAAAAGTAAAGTGGACCTAAAACTTTCAAATATGCATGAACACAATAGCTTTAATAGGATGTAATGAATTTTCTAGAAATAGCAAACCAATTAGAAAAATTAGTGAAATCTAACATCCTCAATGATTGCAGGTACAACATCATCATAGATTCACCACTTACCCTCAACCCAACTAGGATGCTAAGAGGGGCTCCGTAAGTACTTGGTATAGCTAATACCAAAAATCCAAAATTATTCTCACAAATCGAATTTATCCTTCTTCATCCCTCATATAGAGTGCTTGAGTTTGAAGAGGAAAGCTATTCAAGAATTGGGGTTATGCCCCATTACGGTGATGCAGACTCAGTAATATGGTTTTATGTAGAACCATTCTGCACATTCCATCTTGTCAATTGCTTCGAGGAAGGTCATGAGGTAGGCATGTATGTTATCTCTAAATACTTCTACAGATCTACCTTAGTTAGACACAGGTCCACTGCAATTTTGAACTACAGTAAATGTGTGTTCAAAGGAAGCAGCATAAGCAATAGTTGAGTAACTCAGATAGTCAGATGATCAAATAGCTAAAGCAGCAGCTCGACGACTACCTGTTTCTCTTGTGACTAGCAAAATGCCCGTGTGTTGTTACAGAATTAAAAATATCACATCGGCACATTTCAAAGAAGAAATCTATTTTGAATTTTAGAGCTTAATTTTAGAATTAGTGAGAGATTTTTCATCTTTTTATATTTTAGCCGTAAAATATTTCAAGCGGACTCAATCGACTTATACCTTAGACTCTATACAACTAGTGGACAGTGGTCCCACATATCAGAAATTTGGGGAATTTGGTGGTGGGGTGGTGGTGGCAGATTCATGACTCATCACCACCACTACTATCTTTTAAAGGAGTATAGATTCATATTTTAGCCGTCACAAGTTCCAGCGGACTCAAATTTCTTGTACTTAGAATCTATGCACTAATTGGAGACGGGGTAGACAGTGGTCCCACACGTCAGAAATTTGGAGAGTTTGGTGGTGGGGTGGTGGTGGCAGATTCACCACTCACCACCACACTACTCTCTTTTAAAGGAGTGCAGAAACTCAATGTCAATTTCTCACCCACATCAAGCACTCAAATCTTTTACATATATACAAAATTGTAAACCTTCCTAAAAGTTGTCACTTGTGAATTGTTCCATTGTATCTCCAATCTATGTGTATTTCACTGTTTGTGGGATATCCTTGCATACTCTAATTTGCTATCCTGATTATTATTAGGTTGTAGTAAGGGGATTTCATGTACCAAGTTCTGCGATTATGGGTCCAAGGCAGAAGAACATGGTTATGGATACTTCCAGTCAAGAACCAAATGAAGAGAACTTTTCTCGCTTGTATGAATGGAGATTGAACCTAAAAACAAGGACTGTTGCAGGCAAATACTTAACTAGCTTAGATGTTGCCTTGGAATTCCCAGTTATCAATGATAAATTTTCTGGACTACGCCATAGGTACGCATATGTACAAGTGGCGGATTGTTCAGCTTGTTTCGGAGGTGGTCATGAAATAGGTATTGCTAAATATTCATTTTCATTTTTTTTCATACATATACACACTTTGAGTTGAACAAGAAAATTGAGCGGACAATACCCACAAGATTGGTAAGCTCTCAAATTGCTTTTACCATATAGTGCATCAAAAAGTAATACTACTCTGATAATTGTTTTTTCCTTCCTCCAAAACACATGTGAAAGAAAATGTACCTTCAGAATAATTAAAGAAAAGGTACACATGCCTGAATAATAAAATGTTCATTCTGCTTGCAAGCCTTCATTTATCCTTCAAAACTGATTTCATCAGTAGGTTACTTAAACTACAAATGCTATTGAGCAATTGTAGTTTAGGGAGATCAAGTTGCTCCTTAGTACTAAACAATTGAACTGCAATTACAGAATTGCTGATACTATGGTCCGAACAGATGGACTCTAGAACTAGAATTGCAATTGCTTATCTCTGCTATTACACAAATACATCCTCCTTCCCTTCCCACTCCCATCCCACGGACCTGTTTGGCATAGCTCCAGCTCCAACTCCACCTCTCCTGGAGCTGGAGCCCAACCAAATAGTTTCAGCTCCATCAGAAATAGGAGCGGAGCTGGGTGGAGCACTCTTACAAAATGAACTAGAGAGGTGGAGCTGGGTTTAGGCTGCTCCACAACTCCACTCCAGACCCAACTCCTGGAGCAGAATTTAGGAGTTGGAGCTCTACCAAACAGGCCCCACGTATAGAAAAACCCGCTCCAAAAAAAAATGGTGTACCAAAAAAAACTGACCAACCAAAAGAATTATGGGAGAACAGAAAAAATGAACCACGTTCCTAACTAACCAACTAAGAGAGAGAAAAATACGGGAGAAAAACTAAAACCACCCCGTTCCATTGCAATAGACAGGCATCTAAATAGTATATCATAATTTGGGTAAATCTGTATTCCTTCTGTCATGTTTCTTATATGGACATTTGACTACTTCCATTAAATTAGAAAATATACCACATAACTGCGTATTCTCTATAAAGCAGATGCCATATATTAGAGTACGCTCTAGCTTGTCATACTATAATGTTGATCTATAGAAACTAATTTCAGTCTAAATCTTGCAGCTCGACCAAAGTTTATTGGTTTTGCAAAACTTTGTCTTGAAGAAAAACAAAACATAGCTACTAAGGTATCATATGATCTATAATGAACAAGTAATTCGCTATTCCTATCATGCATAATTGGAAACTATTATGATCTTCTAATGACATGAAACAATTTGGAATTCTCAAAGCAGATAGACAGAGAAGATCTAATAAAGGTAGAGTATCATCAGCTAGCAAAAAATCAATTCTGCTCAGGAGTAACGTTTGTGCCTAAGGCAGCAGGTGCGCATGAAGATGATGGCTGGATAGTTTCATTTGTTCATGATGAGGAAACCAATATATCAAAAGTATGTCCTCATTAATTTCAACTCTATTGTTCTATGTGTCCTACAATGTCTCGATAACATATGGAAATCAGTTTTCTGCTAATCATAATGCATTCTACAAATTATCGATTCCAGAATTTTACTTGCAATTGCTTTTCTAAATGTAAAACCTACTAAATGTCCGTTTTGTTTCTCCAAAGATATAAGACTTGAGATATGGCATGCAAGAAGTTATCAGAACATTAGAAATTGGGACCGGACCTACTATTAATCAGAAGTTCAAATGATTTAACAATAACAGATGTATTGATAAACTATTCGCAGGATCAAATTCGTATAGTAATGCTTCATTTTCTTACGTTACAGGTACACATCATTGATGCCCGAAACTTTGAGAGTGAACCTATAGCCAAGATAATATTACCACAAAGAGTACCCTATGGTTTGCATGGAGCATTCATTACAAAAAGAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027071

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027071&oldid=33328"