Os11g0134500

From RiceWiki
Revision as of 08:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0134500| Description = WD40-like domain containing protein| Version = NM_001072209.1 GI:115484030 GeneID:4349700| Length = 4266 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0134500

Description

WD40-like domain containing protein

Version

NM_001072209.1 GI:115484030 GeneID:4349700

Length

4266 bp

Definition

Oryza sativa Japonica Group Os11g0134500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1592848..1597113

Sequence Coding Region

1593095..1593226,1593399..1593516,1593640..1593752,1594230..1594302,1594387..1594526
,1594616..1594719,1594852..1595020,1595671..1595769,1595888..1596061
,1596335..1596413,1596519..1596625,1596819..1596863,1596985..1597029

Expression

GEO Profiles:Os11g0134500

Genome Context

<gbrowseImage1> name=NC_008404:1592848..1597113 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1592848..1597113 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtcgcaagatcaaagtcaagaagaagaaggcatcgagcaagaaagccgaagcttcatcgtctagggtgccttctgccccagccaaggtatggcaacctggcgtggatacactggaagagggggaggagctccagttcgatcctcaggcttacaattatctccgagggtttaacattggctggccatgcttgagttttgatgttgtgcgggatcaacttggccttgtgcgatctgaattcccacatacattatatggcgttgctggaactcaggccgagagggctacatggaattatatcggcattttcaagatttgcaacataaacgggaagaagcgggaacctataccagcatcagcaattgatggcgacagtgatatggatagtgaaagtagtagtgatgaagaagatgaagcagttaatgaagatacaatgcccattttacatctaaaaaaggtggctcatgcggggtgtgtaaatcgtattcgctctatgaatcaggaaccacatatatgtgcaacatggggagacacaggtcatgttcaggtgtgggacttcagctccttccttaattcgttagcagagtctggagcagttgcacacaacgaagacgacagaatccataatcacgtacctgtgaaaatatttggtagccataaagatgaaggctatgcaattgattggagtccgcttgttactggaagacttgtttctggtgattgcaataaatgcatccacctctgggagccaacttcaaacagttggaatgtcgatacaaatccatttgtaggacacactgcaagtgttgaagatttgcagtggagtcccacagaagccgacatatttgcctcttgttcagccgacagaacaatatctatctgggatatacggacagggaagaaaccttgtatttctgttagggctcacaatgctgacgtgaatgtcatctcatggaaccggcttgctagctgtatgatagcttcaggatgcgatgatggaagtttctcaattcgtgatcttagattaatcaaggatgactccttggtcgcccattttgaataccacaagcacccaattacatctgtggaatggagcccacatgaaccgtcaacactagctgtatcatcagctgaccatcaactgacaatttgggatctttcattggaaaaagatgctgaagaggaggcagagttcagggcaaggatgagagaacaggctgatgcccctgaagatttacccccacaacttctctttgttcatcagggccagaaagacttgaaagaattgcactggcacccacagatacctagtatgatcatatctacggcagctgatggattcaatatgttgatgcccagcaacatcgatacaaccattcgagaagctgacgcatag</cdnaseq>

Protein Sequence

<aaseq>MGRKIKVKKKKASSKKAEASSSRVPSAPAKVWQPGVDTLEEGEE LQFDPQAYNYLRGFNIGWPCLSFDVVRDQLGLVRSEFPHTLYGVAGTQAERATWNYIG IFKICNINGKKREPIPASAIDGDSDMDSESSSDEEDEAVNEDTMPILHLKKVAHAGCV NRIRSMNQEPHICATWGDTGHVQVWDFSSFLNSLAESGAVAHNEDDRIHNHVPVKIFG SHKDEGYAIDWSPLVTGRLVSGDCNKCIHLWEPTSNSWNVDTNPFVGHTASVEDLQWS PTEADIFASCSADRTISIWDIRTGKKPCISVRAHNADVNVISWNRLASCMIASGCDDG SFSIRDLRLIKDDSLVAHFEYHKHPITSVEWSPHEPSTLAVSSADHQLTIWDLSLEKD AEEEAEFRARMREQADAPEDLPPQLLFVHQGQKDLKELHWHPQIPSMIISTAADGFNM LMPSNIDTTIREADA</aaseq>

Gene Sequence

<dnaseqindica>3888..4019#3598..3715#3362..3474#2812..2884#2588..2727#2395..2498#2094..2262#1345..1443#1053..1226#701..779#489..595#251..295#85..129#gccacttccaacctccgccctctcttctcttctcctcttcctcctctctccttctccccgagctgcccctcttctcttcctccgatgggtcgcaagatcaaagtcaagaagaagaaggcatcgagcaaggtgagcgattggtgctgactgtctcgcgatattttattctattttattttcatcatggcttaattcgagcctaactctgcctctactctttcttcaatctttatgggtgggtggattgaagaaagccgaagcttcatcgtctagggtgccttctgccccagccaaggtgagagggcatttacatgccaattattacaagcaaatgcacacatagtttttttagtcgcagtgagagggaaaggttcgatgtgtgattagttttttttctccttttggtctataatttcctaagctaaggcaaattgctcctgtcactgcccttcgaaagaaacactgacctgattagtatttcttgtcaggtatggcaacctggcgtggatacactggaagagggggaggagctccagttcgatcctcaggcttacaattatctccgagggtttaacattggctggccatgcttgaggtaaaaattctccacggcagccatttgggcgcttcttatttgaaggccaatatgagcatcgttgtatggtctattttatcctcattgatttattatctgttgcagttttgatgttgtgcgggatcaacttggccttgtgcgatctgaattcccacatacattatatggcgttgctggaactcaggtcgcattctctctttactccttttccttcaaaatttgcattacgactacgtatatttatgtatttgattaataacttctgttaacaacaaaattaggattccagttcgtttccgagtgaactttgctctgtcataattcatgggtgcatgcgattttttttttgtattaacattccttttcaatcagtggttttgcctcctgaacccagagtgatggaatcaatcttttgtcaacatagttttttacttatgagcgatgcctgtgttttcaggccgagagggctacatggaattatatcggcattttcaagatttgcaacataaacgggaagaagcgggaacctataccagcatcagcaattgatggcgacagtgatatggatagtgaaagtagtagtgatgaagaagatgaagcagttaatgaagatacaatgcccattttacatgtaagttctttctccaagtgcacagctgtgaatttagctatgaattttacttgttttgcatcccagtttgctcatctgatacattactctaacatgctttgtatctgtttatgtacagctaaaaaaggtggctcatgcggggtgtgtaaatcgtattcgctctatgaatcaggaaccacatatatgtgcaacatggggagacacaggtcatgttcaggtattttactttgtcttgcaatactccttttttttcactctttttgatcgaagaagtctatttttggtccctgagttctttgcgaggtctgatctccccttaaacttaatacggataccgttaattggcatgctccaatttgtcatacaaaatcagaaaagcccctgcgttcaatctatctggttttgagttctagctttgcagtcagcttggcactgggctcatgtatcgatgaccaaaaaaggattgttcgtcctcctagtcacccatccactgcactgctgctaccttctgtacataaccactgaacacccctgaatcaagttagcggatattagcatgccatgttagacaaaactaggtataagatattatgattattctgtacaggttttgatttttgatagccgaggcactgaaagtaaattgtatcaacgtttagagtggacttgtgaggtagtcgagggatgaaagccctgttgtttagtggtggttccactcaatctgtacattggtaccctgtcctgttttcgtgaacatgacatattgttatctattatattgcaccctgaaaacatgcccaggaatagaatctaccatacctactactttgtgcataatcaaactgtgttatgttgctgcatttgtaggtgtgggacttcagctccttccttaattcgttagcagagtctggagcagttgcacacaacgaagacgacagaatccataatcacgtacctgtgaaaatatttggtagccataaagatgaaggctatgcaattgattggagtccgcttgttactggaagacttgtttctggtgcgtgatcttgtcgtcacgtcctatgatgttttgcttagaaaactatggcctgtcctgcgttcataaaacatccatatgctttcatttcatacatgggcattgagtatatcaatttaatgatttgtgcaggtgattgcaataaatgcatccacctctgggagccaacttcaaacagttggaatgtcgatacaaatccatttgtaggacacactgcaagtgttgaagatttgcaggcatgccactgaaagcatatatacttcttggtgctctctagaacactgaacatttgattatctcaaacatcttgactatatttttgcagtggagtcccacagaagccgacatatttgcctcttgttcagccgacagaacaatatctatctgggatatacggacagggaagaaaccttgtatttctgttagggctcacaatgctgacgtgaatgtcatctcatggaaccggtatgatatgttcacttgaaaattcgattatcttcatgaaaaattcttctaatatttcatgaatatactgactaccgttaccaggcttgctagctgtatgatagcttcaggatgcgatgatggaagtttctcaattcgtgatcttagattaatcaaggtacttcatattgttaagccacactattctgtgcttgtcagttgcaaataacacactgaaatgacatattccctccatcgctgtttttatggtttattttcagtttggatttctgtttatgcatttagaaaaatgtgggctattgggtcttttgatggtaatattgatacaagatgattgaaccatttcatggatgatattttgcattttcttgctactagatttatcaagccagagacactatggtagacaatttgttgcttctgatgtctatatttaatatacagactcctatagaatacatgctcttgtgcaaaaatcagtgcacctagatagttacatgataatgttaattctttgttatttgaacaccttttacaactataataatttattctgttcatatagtctcatcttgctgttgaacgacagtattcacatcaaaatcatatctttttctttctgttctacttctaggatgactccttggtcgcccattttgaataccacaagcacccaattacatctgtggaatggagcccacatgaaccgtcaacactagctgtatcatcagctgaccatcaactgacgtaagtctcctcattccaagttttatacctttatgtttaaagtgtgctgaaatgccccaaaaaaaatgttttctttactattttctgacttgcatttttcaatcctgaattgtttgtgtacagaatttgggatctttcattggaaaaagatgctgaagaggaggcagagttcagggcaaggatgagagaacaggctgatgcccctgaagatttacccccacaacttctctttgttcatcaggtactgttaccacacttgttttatgtttacttcctctcattttcatatcattgtgtgcaccattccttgtgtaattaaaatacatgtttgtggacctcgagatgtatttcaaaagtacagacactgttactgagtgaaatcataaatgtgatgttgattgttttatgtgcagggccagaaagacttgaaagaattgcactggcacccacagatacctagtatgatcatatctacggcagctgatggattcaatatgttgatgcccagcaacatcgatacaaccattcgagaagctgacgcatagatttctacagaagcactgttcatctgaatcaaggtttcatggattaatttttttgaggtgggagagtgtaatgatactgcatgtctgcaggtatcagtttttgatagcttgtatcctattcgttgtcattcatagtggtaggttctcagttttgcactgatgtcgcccgaatgaggataatcaaaagtatctcgatcaactgagatgatatgttatattctgtacaagataagattaatgattgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0134500, RefSeq:Os11g0134500