BGIOSGA027078

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Revision as of 07:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027078| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027078, complete gene.| tag = OsI_290...")
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Gene Name

BGIOSGA027078

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027078, complete gene.

LocusTag

OsI_29009

Ensembl Transcript ID

BGIOSGA027078-TA

Ensembl Protein ID

BGIOSGA027078-PA

Length

3531

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18268455..18271985

Sequence Coding Region

18271881..18271985,18271267..18271432,18270196..18270500,18269621..18269807,18269344..18269497
,18268819..18268881,18268628..18268724,18268455..18268547

Genome Context

<gbrowseImage1> name=IndicaChromosome08:18268455..18271985 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:18268455..18271985 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAGTGTTGAAGAGATGGAGTACAAGCAGATGATGCAAGAGAAAATCAAGGAAACCAAAGATTTTATGAAGAAGAAAGTTATTGAGATTGAGAAAACCAGGATGGAGAAAGGCAAACATAACAAAGGAGGATACTCATCAATATCAGGTCCCCAGGTGATTGAAAAATCTTTCAATGACATGAGCATTAGTTGTACTGGATTTGGAAGTGGTTCTGGATTAGGTGGATTGAACACAGATACAGACACATTTACTAGCAGGCCCAAAGGTCGTACATCTGGAGGTACTACAGGTGCTGGTAAAGGCATTGGAATGAAATTAGGAAATACAAAGAAGACGAACCAGTTCTTAGAATCATTGAAGGCTGAAGGTGAAGTCATTATGGAAGATTTTCAACCATGTTCTCTTCAGTCAAGGTCATCGCCTCTACCACCGAGTGATCCTGTCACAGTGGCTGTTGAAGAGAAACTCAATGTTGCAGTGAAAAGAGATGGTGGTGTTAATAATTTTGATGTTCAAGGAACACTTGCTCTGCAGGTCCTTAATGATGCAGATGGATTAATCCTGTTGCAGATAGAAAGCCAAGATATTCCTGGACTTAGTTTCAAAACACACCCCAATATCAACAAGGACTTGTTTAACAGTCAGCAAATTCTGGGGGCAAAAGATCCTATCAGGCCTTTCCCAAGTGGTCAAAATGAAACTCCTCTAGTGAAATGGAGAATACAGGGGATGAATGAGTCATCTTTACCTCTATCAGTCAATTGCTGGCCATCAATATTAGGAAATGAAACCTACGTCAACATCGAGTATGAAGCTTCTGAGATGTTTGACCTGCACAGTGTCATCATATCTATACCTCTTCCTGCACTTCGGGAGGCTCCATGTGTTAGACAGATAGACGGAGAGTGGAAGTATGATTCAAGAAACTCGGTTTTGGAATGGTCTATTATCCTTATTGATCAATCAAACCGCAGTGGATCCATGGAATTTGTTGTTCCTCCAGCTGATCCATCAATGTTTTACCCCATATCCATTGGATTTTCCGCATCGAATACTTTCAGTAATGTGAAGGTTACTGGAATCCGCCCTTTGAATGAAGGTAGCAACCCTCCAAAGTATTCGCAGAGGGTTCGTTTGGTTGCTGATAATTATCAAGTGGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MDSVEEMEYKQMMQEKIKETKDFMKKKVIEIEKTRMEKGKHNKGGYSSISGPQVIEKSFNDMSISCTGFGSGSGLGGLNTDTDTFTSRPKGRTSGGTTGAGKGIGMKLGNTKKTNQFLESLKAEGEVIMEDFQPCSLQSRSSPLPPSDPVTVAVEEKLNVAVKRDGGVNNFDVQGTLALQVLNDADGLILLQIESQDIPGLSFKTHPNINKDLFNSQQILGAKDPIRPFPSGQNETPLVKWRIQGMNESSLPLSVNCWPSILGNETYVNIEYEASEMFDLHSVIISIPLPALREAPCVRQIDGEWKYDSRNSVLEWSIILIDQSNRSGSMEFVVPPADPSMFYPISIGFSASNTFSNVKVTGIRPLNEGSNPPKYSQRVRLVADNYQVV</aaseq>

Gene Sequence

<dnaseqindica>1..105#554..719#1486..1790#2179..2365#2489..2642#3105..3167#3262..3358#3439..3531#ATGGATAGTGTTGAAGAGATGGAGTACAAGCAGATGATGCAAGAGAAAATCAAGGAAACCAAAGATTTTATGAAGAAGAAAGTTATTGAGATTGAGAAAACCAGGGTGCGCCCTACTCTTTTTTTGCAGACAAATATGACTTCTATTTAGCTAGTAGGCAAAATAGAGCTGTTACTTCTATTTAGTCCTGTTTTTTTTTTTTTTTATCTTGGCCTACTTCGGTTACAGTTACTATCAGTTCCTTCAATCTTTGATGATTACTTGAGTTACAGTTTATCTGTCTGGATAGACTTATGTTTTTTCTAGACTAGCTTGTTGGGCTTTAGAATCTGTAAGAATATATGATAAATTTAGTACTAACATAATTTCTACTAGCTAGACTGTATGATAGCCTTAGGAGAAATTAGGTCAAACAAGACAAAATAAAATTAGAGAAATATCATACAGGAAACATATCCCTTGGAATCATACTACATTATTGGTTACAATGACCTTTCTATACATTACTTGTTATTGTGTAGCTTTCAATCGTAAATTGTTGGTGTTTATGCAGATGGAGAAAGGCAAACATAACAAAGGAGGATACTCATCAATATCAGGTCCCCAGGTGATTGAAAAATCTTTCAATGACATGAGCATTAGTTGTACTGGATTTGGAAGTGGTTCTGGATTAGGTGGATTGAACACAGATACAGACACATTTACTAGCAGGCCCAAAGGTATTATTTTTCGGTCTATTTTAACAAATACTACATGCAGTATTAGTAGAAATGCATATTGTGTCCATTCCTATTGCCTGGTAACAATTTTATTTATTTATATTTTCTCTTCTTCTATTTTATCCTGGTTTTTCTTATATATATCTGAGATGATTCCTTCAGTCTTGAAAGACCAGATGGTTTGGACATGGTTTATGTCAATGTTTAACACTTCGAACATCAAAATCCTTTCGATATTTAGGTTCGATGCATGAGAATCATAAATATATTGCAGTGAAATTAGTGAGTAAAGTTGTATTTTCAAGACATGTAGTCCAAAACAAGATTTGTTAAGACCAGAAGGAGCATGCATTCAGCTAGCCTTTTAGACTTCAAACCCTTAAATATGGTAACGTCTGTGGTGTTCTGTAAAATATAATTTAAATAGTTACTAAACGTAAAATTGTACTGTTTCAGAATAAAAATAAGTCATGCAGCAAACATACCAGAGCTAACTTGCATGCTATATCTGTGATGCAAATCTATTTATTGTACAAGTCGGTGGTTGCCACAATGCTGTCTTAATTGAACCTAGCCTTTCTTTTATCTGTGTAGATTATCTGCTGATTGATTAAAATTTATGTTTTCTTCTCAGTCCTGTTATCCAGAATATGTTTTTGTCAAGTCCTTCTCGACATTTTGGTCAACTATATTTTCTTTTCTTTAACTGCAAGAAGAATTTACAAGATGTTATGTTATTTTGTTCTAAATAGCAACCTACCTGCAGGTCGTACATCTGGAGGTACTACAGGTGCTGGTAAAGGCATTGGAATGAAATTAGGAAATACAAAGAAGACGAACCAGTTCTTAGAATCATTGAAGGCTGAAGGTGAAGTCATTATGGAAGATTTTCAACCATGTTCTCTTCAGTCAAGGTCATCGCCTCTACCACCGAGTGATCCTGTCACAGTGGCTGTTGAAGAGAAACTCAATGTTGCAGTGAAAAGAGATGGTGGTGTTAATAATTTTGATGTTCAAGGAACACTTGCTCTGCAGGTCCTTAATGATGCAGATGGATTAATCCTGTTGCAGGTAATTTTTTTATATTTATTAACATTATTCTTGTATTGTTGTCATATATGGGAAATTTGTACTTTGAAACAGAATAAAACAACATAAAAAACATTTTCCTTTCTTTTTTCGGTGTGAAGATATAGTGATATTGTTTTAATAAATATAATGCTTTCCTTCTACTATGATGCCCTTTCACATAAAATAGATTGTGCACAGATTTTTTTTCTTACTCCATGGAAATGCGGTGATGATCTTCACTGTAACATTCGCAATGATTTATGTTTCTAACGCCATGCATTTATTGCTAACAAGCAACCTTACTGCACATTGTTTTGGGTAACCAAATCTCTTTCTTACTATTGTTTGGAGTTGGTTTATTCACTAGTTAATACTTGCTATCTTGTAGATAGAAAGCCAAGATATTCCTGGACTTAGTTTCAAAACACACCCCAATATCAACAAGGACTTGTTTAACAGTCAGCAAATTCTGGGGGCAAAAGATCCTATCAGGCCTTTCCCAAGTGGTCAAAATGAAACTCCTCTAGTGAAATGGAGAATACAGGGGATGAATGAGTCATCTTTACCTCTATCAGGTGTACATTCACTTCTCTCTCTTCTCTGGTATCTAGTAATTTGGAGTTCTAATAACTTTCACTTCTCTCTCTTCTCTGGTATCTAGTAATTTGGAGTTCTAATAACTTGTTTGCTTTGCATAGTCAATTGCTGGCCATCAATATTAGGAAATGAAACCTACGTCAACATCGAGTATGAAGCTTCTGAGATGTTTGACCTGCACAGTGTCATCATATCTATACCTCTTCCTGCACTTCGGGAGGCTCCATGTGTTAGACAGATAGACGGAGAGTGGAAGTAATATTCCTGTTCCTCTACCGTTCTCTTATGTATTTGTAACTACTGCAAAATTTTGTTGTGAATTTTTTTTTTATTTTTGTTGAAAGATTTCCTTTGCATGTCCAGGCCAATGCATAATGTCTGCTGTTCTTGCATCATGTCGCCTTTTTGGCAGATATTTAAGGGGGCGGGGGGGGGGGGGGGCACACGACTGCATGGCAATATCATATTAAGTTTTTATATGAAACATTACTAACGGTTACTAGTATTCTAGTTTTTATTGTTTACGGTAGATTCGAAGTGTTAATGGATGTGACTCCTCGGAATGGCACTTAACTATTTGATTCTATTATTCACGTTGCATTGTCTGGAATGCTATTACAAACTCATCCAGACTCTGTCCCTTTTGTATCCTTGAGCTTGTGTGCATATGCTCTCTTTCTCATGCCTTCTGGTATTTTCCCTTTCTTTGCCCTACAGGTATGATTCAAGAAACTCGGTTTTGGAATGGTCTATTATCCTTATTGATCAATCAAACCGCAGGTACATGAAATCTGTGAATTCCAAATTATCATTGTTCTTTTATCTTGTAGTTTATGCTCTTATTACTAGCTCTTATTTTTGTGAACCATTGCAGTGGATCCATGGAATTTGTTGTTCCTCCAGCTGATCCATCAATGTTTTACCCCATATCCATTGGATTTTCCGCATCGAATACTTTCAGTAATGTGAAGGTTAGTTTGCCCATTTAGTTTGACAGATTCTCCTTCCCATCTCTCCATTTTTGTTAATTCTGTTTGCTGGATATTTTCAGGTTACTGGAATCCGCCCTTTGAATGAAGGTAGCAACCCTCCAAAGTATTCGCAGAGGGTTCGTTTGGTTGCTGATAATTATCAAGTGGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027078

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027078&oldid=33335"