BGIOSGA027101

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Revision as of 07:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027101| Description = BGIOSGA027101| Definition = Oryza sativa Indica Group BGIOSGA027101, complete gene.| tag = | tid = BGIOSGA027101-TA|...")
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Gene Name

BGIOSGA027101

Description

BGIOSGA027101

Definition

Oryza sativa Indica Group BGIOSGA027101, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA027101-TA

Ensembl Protein ID

BGIOSGA027101-PA

Length

3367

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:17685047..17688413

Sequence Coding Region

17688407..17688413,17688068..17688312,17687616..17687819,17687236..17687328,17686914..17687147
,17686307..17686375,17686140..17686226,17685492..17685611,17685154..17685399
,17685047..17685067

Genome Context

<gbrowseImage1> name=IndicaChromosome08:17685047..17688413 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:17685047..17688413 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTGTACAAGATGAAGAGGTGAAGAAGCACAAGGGGACAACCTTGCGATATGTTTGGGATCTTCCACCTGGGAAACGTATAGTTGTAAAATGCAACAGATTAGGGCAATCTATCGGGGATGAAGGTGGATTGCTAGGACAGTTTTNGGGCACATTAGCAAGAAATGGAGCTTACTGTCCATTAGATAAGATGACCTGGAGAAAGATCAAAGCAGATGAAGGAGATTTAACAATACTACAATTTGTCCAGACAAAGTTCCTGTACCCTCCATCATGCGTTCAATGGATACCGAAATCAATTGGAAGAGATTGGAGGCGATACAAGGCTGCACTAAAAGATAAATATTTTAAACCAAAGAAGAAGCGTTCTGCTCTATATAAGCTTTGTCCAGACGATGTAGAAAAAGACCAATGGATTCCACTTATCAAATATTGGAAGTCAAAAAAAGGAAAGAGACAAGATGATCCAAATAAGAAGCAGCCACATAGAGCAATGGTTTACTTAGCAACTCACAAAAAAAAGGATAAAGATAAAAATCAACACGTGGTCACATTGGAGAACCTCATCGATGAACAACCAGAGTTGGCACAAAATGACCAAGGAAGAGTTGCATGGGAAGGTGATGCGCTAAATAAAGTATTGGGCAAAGAAAAACCTGGCCAAGTGCACGGAATGGGATTACTTCCTGATCCTAAGCAGGTTTATGTTCGTACATCACATCATCTCAAGAACATAAACATCACTACAGTGAATGACTCATCATCGGATGAAGAGACACATAACAAAAGAAGATGTGAGGAACAACAAAATATACACCATGACAATATTCTGGATCTTTGTGGCAAAAAGCACCAGGAGGCTGATAACAACATAGGATCACCATGTCAAGATGATTCATCATCACAGCCACACCTTGCTCATGATCTTTGGCGGGAGATGAATAAAAAGAAGCACCGAAATTTAGAGAAATTTGCAAAGACTACAGAAAAACATGACACTCAGAAGAATACTGCACATCACATGGCCCAAAATAGGGTGCATTCTTCTTCAATGAAGGTTGGTACCACAATAATCTTGGTGACTGCAAAATATCCTAACAAAGAAACTGTGGCATATGCTACTTATTTGAGTAGTAACCCAAGAGACAAAGTGGATGGTGTTGAGATTGGTAACAAGTTCACTAAAGTGGTTGTCAATCATCCACTTAAGGAAGATGAAGAGCTCGTAAGGCCACTAAAGCACTGCAAGACAATTGGTGATGCCCATTATGAAGGAATGTCGATTGCTTGGCCTTCATTTTGTGTTCAAAAGATCAATGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MPVQDEEVKKHKGTTLRYVWDLPPGKRIVVKCNRLGQSIGDEGGLLGQFXGTLARNGAYCPLDKMTWRKIKADEGDLTILQFVQTKFLYPPSCVQWIPKSIGRDWRRYKAALKDKYFKPKKKRSALYKLCPDDVEKDQWIPLIKYWKSKKGKRQDDPNKKQPHRAMVYLATHKKKDKDKNQHVVTLENLIDEQPELAQNDQGRVAWEGDALNKVLGKEKPGQVHGMGLLPDPKQVYVRTSHHLKNINITTVNDSSSDEETHNKRRCEEQQNIHHDNILDLCGKKHQEADNNIGSPCQDDSSSQPHLAHDLWREMNKKKHRNLEKFAKTTEKHDTQKNTAHHMAQNRVHSSSMKVGTTIILVTAKYPNKETVAYATYLSSNPRDKVDGVEIGNKFTKVVVNHPLKEDEELVRPLKHCKTIGDAHYEGMSIAWPSFCVQKING</aaseq>

Gene Sequence

<dnaseqindica>1..7#102..346#595..798#1086..1178#1267..1500#2039..2107#2188..2274#2803..2922#3015..3260#3347..3367#ATGCCTGGTAAAACTTTAACTACCTGAATCCCAAATAGTTTGTGATTGCATATATATGGTTAACCTAAAGTTAGTGAGCCTTATGTCAATTAATTTTGTAGTACAAGATGAAGAGGTGAAGAAGCACAAGGGGACAACCTTGCGATATGTTTGGGATCTTCCACCTGGGAAACGTATAGTTGTAAAATGCAACAGATTAGGGCAATCTATCGGGGATGAAGGTGGATTGCTAGGACAGTTTTNGGGCACATTAGCAAGAAATGGAGCTTACTGTCCATTAGATAAGATGACCTGGAGAAAGATCAAAGCAGATGAAGGAGATTTAACAATACTACAATTTGTCCAGGTACCTCAAACGCTAAAATAGCATAAGTATAATGCTCTGTTTGTATTACTAGTCATTACTTTTTGCCTACTCTCAGATTGACGCATCTGTTCATATCCATGGCACTGAATGTTTTCGATTCAATGTTTATATGTATTTTACAGATATTCAATGCTGAGTTTTCTTACTTGCTGTTATCCCTTGCCTAACCATTGACGCAATCATGCAAATTAAAATACTTCTACTCTCATTATTCCTATGTATTTCAGACAAAGTTCCTGTACCCTCCATCATGCGTTCAATGGATACCGAAATCAATTGGAAGAGATTGGAGGCGATACAAGGCTGCACTAAAAGATAAATATTTTAAACCAAAGAAGAAGCGTTCTGCTCTATATAAGCTTTGTCCAGACGATGTAGAAAAAGACCAATGGATTCCACTTATCAAATATTGGAAGTCAAAAAAAGGAAAGGTAAAAAATCTGCTCCACAATCTGTACTATTGTCTCATTGACATATATTGTACTGTTGTTCCTACCGTAAACAACATTAGAAGTGTGAACTCAATGAGACTACATTGCTTCTGTAATAGGCCCACAGTGCAAAGAACAAAAGAAGTCGTTCAATGTTATAGAACCCTCACTCAGCAGGGACAAAGAGTTATGCTCGTTGGTCTGAGGACTTGGTGAGCCAATTTGTTTTGTTCAAAATTCATCTATACATGTTCACTTTACTTTCTTACATTACCTTTCATTTTCAGAGACAAGATGATCCAAATAAGAAGCAGCCACATAGAGCAATGGTTTACTTAGCAACTCACAAAAAAAAGGATAAAGATAAAAATCAACACGTGGTATGCCATATACACATAATCCTTCCATAAATATCTAATAGGTATGTTATCTACCTTGTACAGTGGGCATATATTTTTTCACTTGCAGGTCACATTGGAGAACCTCATCGATGAACAACCAGAGTTGGCACAAAATGACCAAGGAAGAGTTGCATGGGAAGGTGATGCGCTAAATAAAGTATTGGGCAAAGAAAAACCTGGCCAAGTGCACGGAATGGGATTACTTCCTGATCCTAAGCAGGTTTATGTTCGTACATCACATCATCTCAAGAACATAAACATCACTACAGTGAATGACTCATCATCGGATGAAGAGACACATGTTAGAGGGGAAGTGGGGGAATTAAAAATATTAGTCAAAACACTGGGTCAGCGTATTGAGGAGTTGGAAAACAAAGGAACAAGCAATGGGAATAGTGAACCAACTATGCTAAACGTTATAAATACCTTTGTCCTTAACATTGAATTTTTAGCTACTTCTGATTTCATTTTTGTAGATGCTTGTAAAATAAAAAATTTATGTGATTCACACTAAAATCTTACCCCTTCCTTATTTCATTGTTGTAGGCAACATCTCAGAGAACTTTTGATGATGGTATTGAAGATTGAGTAGTACGGACTAATAGAAAGGTAATGTCAAAGTAATGCATTCTATGTTTCTCACCATATTTTGTGCAACAATATTTAAATATGTGCACATACAGAGGGTTCGATGCAGTAGACCTGATCAAGACGACTCAATGAGTAATCAAAGAAATATATCAATGGTATTTTGTTGTTTCTAATTGATAAATTTTATTTGAACACTCAATACACATACTGGCATGTATAGTAAATTTTTATTGTCCATTCCACTATAGAACAAAAGAAGATGTGAGGAACAACAAAATATACACCATGACAATATTCTGGATCTTTGTGGCAAAAAGGTTAGGATTTGTTGTTTTCATTCATATGGTGCAATGCAATTTATATATGGTTTTACATGGATTATATATCATGGAACCAGCACCAGGAGGCTGATAACAACATAGGATCACCATGTCAAGATGATTCATCATCACAGCCACACCTTGCTCATGATCTTTGGCGGGAGGTAGTTCTTGAATGCCTATTAAAATTGTACTTGTTTCTCAATGTGTTTTATCCATCTCACTATGATATTAGAGTGAAATATAAACACGTTGTTGGGAGAACTCCTAGTTAGGCAATGCTACATCTATGAATGCATCATTTGTGTGAAACATAAACATAATCTTTTCAAGGAGTACTGCTATATTTTTATAGACATTAATCAACTGAAAATTATGTAGTAGCTTCTAGTGCTCAAGTTTAGCTTTGGACCCTTCATCTATGCCATTTAGTGTTGGCAACCGAATGATAAACATGAAAGGATATTAAAAGCAATTTGTCATATCTTAATAAAGTTGGTCTTGTTCATTTGTGCTATTGGTTTGTATATACCATTTACATGCTCTAAATACTGTTATATGTCATGTCCTTCCATTTTTCCTAATTATAAGATTAATGTGCAGAGTTGGGTTCAAAGTACAAAAGTTATGTTATAATGAAATATGTTCTGACCTCTTTGTAATGTAACAAAATTTCTTATGTCTCAACATAGATGAATAAAAAGAAGCACCGAAATTTAGAGAAATTTGCAAAGACTACAGAAAAACATGACACTCAGAAGAATACTGCACATCACATGGCCCAAAATAGGGTGCATTCTTCTTCAATGAAGGTAGTAAAAACATACAAAGATGGTACTACTAAATTATTGTTTAACAATTAATTATTGTATATTTCTTAATGAATACATTATTTCTATTGTAGGTTGGTACCACAATAATCTTGGTGACTGCAAAATATCCTAACAAAGAAACTGTGGCATATGCTACTTATTTGAGTAGTAACCCAAGAGACAAAGTGGATGGTGTTGAGATTGGTAACAAGTTCACTAAAGTGGTTGTCAATCATCCACTTAAGGAAGATGAAGAGCTCGTAAGGCCACTAAAGCACTGCAAGACAATTGGTGATGCCCATTATGAAGGAATGTCGATTGCTTGGCCTTCATTTTGTGTATGCTCATAATACCTTCATGTAATATATATATGATGAATACTATATTTGCAATGCAAATGCTAATATATAAATTTGTTATGTAGGTTCAAAAGATCAATGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027101

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027101&oldid=33358"