Os11g0135000

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Revision as of 08:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0135000| Description = Similar to Major facilitator superfamily antiporter| Version = NM_001072214.1 GI:115484040 GeneID:4349705| Length = ...")
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Gene Name

Os11g0135000

Description

Similar to Major facilitator superfamily antiporter

Version

NM_001072214.1 GI:115484040 GeneID:4349705

Length

4926 bp

Definition

Oryza sativa Japonica Group Os11g0135000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1608357..1613282

Sequence Coding Region

1608610..1608707,1608872..1608915,1609380..1609468,1609576..1609620,1609987..1610094
,1610240..1610325,1610460..1610547,1610865..1611035,1611308..1611383
,1611467..1611516,1611625..1611687,1611791..1611844,1611988..1612090
,1612216..1612318,1612628..1612688,1612776..1612816,1612965..1613097

Expression

GEO Profiles:Os11g0135000

Genome Context

<gbrowseImage1> name=NC_008404:1608357..1613282 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1608357..1613282 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgagccgccggcgaccaaggtataccacgatggctgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacaaggagttcctcttcgttgccatcaccaccctcgcctcctctctgccaatctcttccttgttccccttcttgtacttcatgataagggaattgcatatttctcggacagaggaagatattggattctatgctggatttcttggcgcatcatatatgatcggtcgaggttttgcatcaatcttgtggggtatggtagcggatcgtattggccgaaagcctgtcattatcttttccatttttgcagtcattgtgctcaatactttgtttggattaagtgtgaagtactggatggctgttaccacgagattccttcttggtgctctgaatggattgcttgcaccaataaaggcttactctatcgaagtttgccgagctgaacatcaagctctgggcctatcaattgtgagcacagcatggggaataggtcttgtagttggtccagcaattggaggctacctcgcgcagcctgtcaaacaatatcctcatctttttcatgaaaagtcaatatttgggagatttccataccttctaccctgtctttgtatatcactttttgctctcttggtcctcataagctgtatatggctaccggagaccctacataagcataaaggccttgaaacaggagtggaggcagctgaagcttctactactcaaggaagtgcagaatcacataagaaaagtttattcagaaattggccattgatgtcatctatcatcacatattgtgtcttctcccttcacgacaccgcatatagcgagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatctaaagatgttgggcaagttcttgcagtggcaggtgccagccttcttgtatatcaactttttatctaccgttgggttgataaaattcttggacctatcaactcaacccgcattgcgtcggtactatctataccgattattgctgcttatccctttatgacgcacttatcaggaataagacttggtgtggccctctatagtgcagcaatgatcaaaagtgttcttgctataactataattacgggcacttctcttctacaaaacaaagcagtgccacaagggcaacggggtgctgcaaacggaatagctacaacggccatgtccttgttcaaggctgttgcaccagctggcgcaggtgttctattctcttgggcacaaaagcgacagcatgcagcattttttccaggtgatcagatggtgtttcttttactgaacctgactgaggtcattggactcatgttgaccttcaaacctttcttggcggttcctcaacaatacaaatag</cdnaseq>

Protein Sequence

<aaseq>MAEPPATKVYHDGCPGCAMEQRKEEHKGIPYKEFLFVAITTLAS SLPISSLFPFLYFMIRELHISRTEEDIGFYAGFLGASYMIGRGFASILWGMVADRIGR KPVIIFSIFAVIVLNTLFGLSVKYWMAVTTRFLLGALNGLLAPIKAYSIEVCRAEHQA LGLSIVSTAWGIGLVVGPAIGGYLAQPVKQYPHLFHEKSIFGRFPYLLPCLCISLFAL LVLISCIWLPETLHKHKGLETGVEAAEASTTQGSAESHKKSLFRNWPLMSSIITYCVF SLHDTAYSEIFSLWTVSDRKYGGLSFSSKDVGQVLAVAGASLLVYQLFIYRWVDKILG PINSTRIASVLSIPIIAAYPFMTHLSGIRLGVALYSAAMIKSVLAITIITGTSLLQNK AVPQGQRGAANGIATTAMSLFKAVAPAGAGVLFSWAQKRQHAAFFPGDQMVFLLLNLT EVIGLMLTFKPFLAVPQQYK</aaseq>

Gene Sequence

<dnaseqindica>4576..4673#4368..4411#3815..3903#3663..3707#3189..3296#2958..3043#2736..2823#2248..2418#1900..1975#1767..1816#1596..1658#1439..1492#1193..1295#965..1067#595..655#467..507#186..318#gttgtttgcctttgtcaatctccaccacatcatctcctacctcgtcctgcctgcggtggccttctcctgcctctgcctgcttcacaagtccttctctgactctgtcttggccatcctattcctagctcatcatcacactcttgcatacgtgcttgttgtcaactccattgagagcgtcgccgttgatggctgagccgccggcgaccaaggtataccacgatggctgccccggctgcgccatggagcagaggaaggaggagcacaagggcattccctacaaggagttcctcttcgttgccatcaccaccctcgcctcctgtatgaatatataatatagaattagcacgcatacatgcacagtcaacttagtttgatttgatgtttgtttatctcttcttggtcttatcttattttacttagtacgtagtaacatgcatccttctctgtctctccccttgattttcagctctgccaatctcttccttgttccccttcttgtacttcatggtaagtttaatctccatgcattccattcaatttcatgaaacatatattttgcaaaagatactaaatgcattcccttctttacaacagataagggaattgcatatttctcggacagaggaagatattggattctatgctggatttcttggtattaacatttctgaaaaataattagtcactgagtaacaaaattcacgaacacttctttcacaactacgtcaaaaatccactaatgtttacatgatgagaaattttataatccttgaaaaagtatctcgatatacctaaattttacactcaaacactgtaaaagttctcttttttctttttgttttggtacatcgaggtacttagtactagaggtaccaaattttacactagaaaatgtggtatttcccggtactttttcaaggatgataaaattacccttacatgatactccatatttctgctgcaggcgcatcatatatgatcggtcgaggttttgcatcaatcttgtggggtatggtagcggatcgtattggccgaaagcctgtcattatcttttccatttttgcagtgtaagcactatagtacctttccaaaaatattgacaggaatgtgtccatggcctattggcatttactttgtagtctgttccatctgctaaacaatttttaactcgtcttcgaatctatactttcagcattgtgctcaatactttgtttggattaagtgtgaagtactggatggctgttaccacgagattccttcttggtgctctgaatggattgcttgcaccaataaaggtacctttttaggaaacattaagatactttgaaatgtgaaagaagtctgttgagaacaaataagggatggtgtcagtatcaattggtattcttattccatcaacaatctacttaattatgttttatattacttgtggctgcaggcttactctatcgaagtttgccgagctgaacatcaagctctgggcctatcaattgtaaaatacaaatctatatatagcacttcacatctatatatatgatggcataactttgtttcatgtcatggactaagtttcatccatgtcatcaaaattttaggtgagcacagcatggggaataggtcttgtagttggtccagcaattggaggctacctcgcgcaggtaatattagataagcatattcgggttcataaatatccttttcttcttttgtgaatgatcgatgacaatgagtatttatctttaccttggtctatttcttgatatcagcctgtcaaacaatatcctcatctttttcatgaaaagtcaatatttgggaggtatttttcctattgaaaaccggttcttcagatttaatgagaaatattatgcaattgtaaatgtgtgattgcaaattgtgcagatttccataccttctaccctgtctttgtatatcactttttgctctcttggtcctcataagctgtatatggctaccggtatgtattactatttgttaagttgcattattaagattatatattctatttccatgattccaactgcaagaattttgtgtatctcttttatgatcagtttctaaataagactgccttgttggataaccaaaagaaccaagacagatacccaaactaaccgcatgaaccatgtgcctgactgcctggtctaccaaccctttgtaaaccttgcgcatgacttaatctctattatcattttttatgactgcatatttctttgatcaactaaataggagaccctacataagcataaaggccttgaaacaggagtggaggcagctgaagcttctactactcaaggaagtgcagaatcacataagaaaagtttattcagaaattggccattgatgtcatctatcatcacatattgtgtcttctcccttcacgacaccgcatatagcgaggtagtaacagttattaatgtgatatgaaattgttattatgtaacctctctatgtcaaataattatcttgcctttctccataaagagcatgtttcttgctctataaataagctgacaatgcatttgcggtaataaacctttcatatttatccatggcaatatttttctttcagttaatcatatatctctaagttatgtgttgtcatacccaagtattagcaaattcttccattttagtctatgaatattgatctatcaaaaatcaaatatgctatgtgaaaaatgtaattttctaaacattattttttttaacatcagatattttctctgtggactgtaagtgatagaaaatatggtggactcagcttttcatctaaagatgttgggcaagttcttgcagtggcaggtaagtcaaattcaatcaatttctttcctacaaattttaaacataggaaactctttaatcacagggtgtttgcattaatgttgagctgtgacatgttggtttggaaaggtgaacatgtttttgttacactgtaggtgccagccttcttgtatatcaactttttatctaccgttgggttgataaaattcttggacctatcaactcaacccgcattgcgtcggtgagttactaatttcaatgtttcatagtttctcatatacttggtacagtttacttattattggttaccgagaggtttaagagaaaagagttcaaagaattattggttaatgcctgcttttatcagctgacctttagcattgcaggtactatctataccgattattgctgcttatccctttatgacgcacttatcaggaataagacttggtgtggccctctatagtgcagcaatgatcaaaagtgttcttgctgtaagtactttatgaacctatgatttatatttttaaaaaaaaataattctaaaagtataaactctcatatatattttttagtaaacctgttggctactccactcaaggaagcatggtaaacaaatacttagcaaaggcattattgcacctttggtcgtggagcctgtgggtggtctgaccaaaaggttcagatgtgaaaataaaaaaaatgttaatatttaaaaaagtggttgaaaaatccacgagcttgcagttctgaaatttagctagcacttcaactgcacaaagttatatgctaaaatgtatgctaggtaatttagtttatttgcacatttgaagatactaatatttcgtaatgttgatcagataactataattacgggcacttctcttctacaaaacaaagcagtggtacttgtcccacttatctgatctcacttgactattgtctgacagcctcacaaaagaaaagaaatttttctgacattttttttttgaaaaatgcattattttgacagccacaagggcaacggggtgctgcaaacggaatagctacaacggccatgtccttgttcaaggctgttgcaccagctggcgcaggtgttctgtaagtacaaatctaattgtctacaactcttgattataaactaacagttgaacagaactactagatatatggacaacattttttagaaaatggattaaactggcctctacatccaaaatacatgtacacggcaaaagatatatggacaacataattgtcgcttttcacaaatactacaggagtatgaccatcagtggtgtttaccatttgggctgtgtacatccattgtggatgtagaggccggattttaatccattttctaaaaaaaaaagtggtacttaccatttgtttgacacaaactgtggtcatgaaaaatgttagtggctagtttgtccttccaagtttagtgaatagttgttgcctgaagcctgaagatagatatgaaaggatgagcctgttctaacagaactgtaaacctgttttgaagaagaaaaggactgactgttgaaaatctgtggctgcagattctcttgggcacaaaagcgacagcatgcagcattttttccaggtaaatactcctatgcatttttatgaaccatgttgcagccattactacagtactttatataagtgaagtaaacaaatcggtgttgtgaattactagcacatacaagaaatagaaacttgtgttatgttgatttgatcataaaatggaaattcaatgttgtgcaggtgatcagatggtgtttcttttactgaacctgactgaggtcattggactcatgttgaccttcaaacctttcttggcggttcctcaacaatacaaatagaacattcagatactgtcagctggtgtggcaaacaccatagagagatagttgtagctagtactatgttttagtattaaaacatggtttagatatggttgtagcagagtgttagaaacatgcaccattccaggtgcagagcctctgttaggttgttcttctttttgttctgctttgggtctgtgagataaataatcttgcaaaagctatgacattttttattgcagctttggagtacaacacatcagatttgcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0135000, RefSeq:Os11g0135000