BGIOSGA027141

From RiceWiki
Revision as of 07:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027141| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027141, complete gene.| tag = OsI_288...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027141

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027141, complete gene.

LocusTag

OsI_28883

Ensembl Transcript ID

BGIOSGA027141-TA

Ensembl Protein ID

BGIOSGA027141-PA

Length

7981

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16563092..16571072

Sequence Coding Region

16570905..16571072,16564074..16564204,16563811..16563964,16563092..16563430

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16563092..16571072 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16563092..16571072 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTCCATCGTGATATCAGTGATGCGCCTCATACAGCTGGATTACTACAGCTCCGATGATGCCGGCAAAGGAAAACTCAAGGCAGCATTGTTTGCCTTCTACTCTCTTGCTCTGATTCACGGTGTGGGCTTCTATAGCTGGTTCCTGTTGCGCAGACTTGTGATGGAACCGGCACTACAGATCCTTGCACAGGTTGCATTGGGGCCTTATACTGGGCTCATGACCAAGGAAGAGTTTGTTAGTCTGCTTCGGGACATCTTCTTCGGCAACAAGGATAACATTGAGGAGAAAAGCAGGAGATACGGCACCGTGGTTGATCAACTCACTGAAATGCTTGTCAAGGACAAGCAGTGCCAGATTAGCGCAGCAGCAATATTGGAGCACCTATGTTCTCGCTTCCTGAAGAGCTGCCAACTATCGAAGCAGGATGCCATCAATCTTTTGACAACGGTTCTGGGCCTAATATTGTCCAGTAATACGGAAAGAAATGCAGTGGCAGGTTCAGATTCAAGCAACTATGCAGGTGCTGCGACAGAGGCGAGAGGAAGCGACTATTCTGCAATAGCCAGAGATGAAGAAAGCCAACCGCCAAAAGATGCCGTTCAGGACAAGTCCCCTACGGAGCAAGATGATAAACTATCTCAGGAAAAGAAATTGCTTGCGGCCTTGCTATCCTTTACAATGGTGATATGCGAGAAACTGATTGATGCAGATGACTTCTCTAATGTTGCTCATGTGGACAGAGAACTGTTGAAGAAGCTGATCGATAGAGATAATAGATGTAAATAA</cdnaseq>

Protein Sequence

<aaseq>MVSIVISVMRLIQLDYYSSDDAGKGKLKAALFAFYSLALIHGVGFYSWFLLRRLVMEPALQILAQVALGPYTGLMTKEEFVSLLRDIFFGNKDNIEEKSRRYGTVVDQLTEMLVKDKQCQISAAAILEHLCSRFLKSCQLSKQDAINLLTTVLGLILSSNTERNAVAGSDSSNYAGAATEARGSDYSAIARDEESQPPKDAVQDKSPTEQDDKLSQEKKLLAALLSFTMVICEKLIDADDFSNVAHVDRELLKKLIDRDNRCK</aaseq>

Gene Sequence

<dnaseqindica>1..168#6869..6999#7109..7262#7643..7981#ATGGTGTCCATCGTGATATCAGTGATGCGCCTCATACAGCTGGATTACTACAGCTCCGATGATGCCGGCAAAGGAAAACTCAAGGCAGCATTGTTTGCCTTCTACTCTCTTGCTCTGATTCACGGTGTGGGCTTCTATAGCTGGTTCCTGTTGCGCAGACTTGTGATGGTCAAAGTCATGGAGAGCGTACACGGAATGCGGGTTCGAACGGTAGTGGGGTTTTCAGCCCACGGGATACCTTCAAGAAACCACATCGAAATGTGCAAATATCCTGCTCGAGTCTGGATATCATGATGACCATCTCACCGGAGTACGGATGCTCGACACGTTCGTCGTCAAGAAGACGAGATCTGTACGGCGCCACATGCTATCCTCCAGGCATTCCATCCAAAATCTGCTCACGATGCTCTCGCGCCCGACAAGTTGGACCCTGGATGAAAGAGAGATAAGGGAGCGTGCTGCAAGGATTATGGCGGGCATCGCCGGCGACCTACACATAGCTCGGTTCCCAGGAGCACTGCAATCCATGTCTTGCCTTCTTGATTGTGCTGGACACCACCAAAAGCATGACACATGTGGTTCACCGATGCAAGCTTTTCAACAGTACGTCATCAGAGAGGAGTCATACTGACACTAGTGCTGACCAACGAGTCAGTTTGTCATCGCCAAGTAGGCAACATGGACGCAAATAAGAAGAGGACAAGAACCGGATGAGTCAGCAGTTCCAAACAATTGATGGAAGCTAGAAGAGAGAGGCTCCGTGAGGACATCAAAAGGAGGAAGAGTGCAAGTTCCTTCAAGCCCAGAGGAGCTAAAGAACTAATCCTGCTAATCATCGAGAGGCTTGCTGGCGACGATCACAACTGCAGAGAGATATGCGACACCCAAGGCCTGCTATCCAAGATCACAGCTCCGATCACTTCACGTGCTTTCCTTGACGCCGTTTGCGAAGACGATGATGTATGGTTTGACATATTAAGCACATCGCTCAGAGTCCTGGCCAGGCTTATCAGTTCTCCTGGAGAAGCCAGCACAAGGCTGTGTTGGGCTGTAAATAGAATAGTGTGTGTGTGTGTTTGTGTGCTGGCCCATCAGCTAGAGGCCCATCTACTCATGTATATGTAAATAATGATAGCAATACTGAAGGGGTGAAGCTTCTAGAGAAAAATTCACAAACTACATGGTATCAGAGCCGTGCTCCTGGCGGCCGGCGGCGACGAACCCTAGCTGAGGGAGCAAGCGCTGAGGTTGGAGTTCTTGGTGGTGGTGTAGGACGGTGAGCAGGGACAAGTAGGAGTGGACTGGAGGCGCAGCAGGTCAGGACGCTCGCGGCTGCTGCAGCGAGCGGCGGTGACGGCAACACACAGCAGGTGCGTGAGCTGAGCAGGGAGGTCTGGAGGGGCAGCAGCTACAAGTGGGTTCCCCGGCCGTGCTTCTGCTTGTTGAGTTGGTTCCCAGCCGTGCTTCTGCTTGTTGGCTGGTGGTGGACTCTGTACTGTGGCTTGTGGTTGAGGGAAGATGCACTAGTGACTGTTGTTACTGTTGTTCTTCTTCAAGATTGAGGTAATCGAGATTGTTCTTGCTGCTACTACTGATTTACTGGGAAGAAAATACAGGGTAGAGGAATTGTTGGCTTGTTGTTAGTGCTGCTGGTGGAGTGTAGACAAGGAGAGTTTGCTTTGTTACAGCAGTTAGTTGAGTGCTGCTTGATTAAAATGGGGGAAAATCAGGGACTTGAACAAGTGATGGGTAAATTGGTGGACATGCTTGCAAAGAAATTTAGTGAGGCCCCAACTACAAGTAATGCAGTGATTCCTCATACTGAAACAATGCAAAAAATTGAGTTGATGCAAAATGATATTAAGTTGGAGGGTGTCAAAAATTATTTAAGTTGGTCAAGGAGAGCATTGTTGATTTTGAAGACTAAGGGATTAGAAGGATATGTCACCGGAGAAGTGAAGGAGCCTGAGAGTGCTAGTGCAGAATGGAGGACTTGGAGCACTACCAACTCTTTAGTAGTAGCATGGTTGTTGACTTCACTTATCCCTGTTATTGCTACAACTGTTGAGACCATCTCAAGTGCAAGTGAGATGTGGAAAACTCTTACTAATCTCTACTCAGGAGAAGGAAATGTGATGCTAATGGTGGAGGCACAGGAGAAGATAAGTGCTTTGAGACAGGGGGAGCGTTCTATTGCAGAATATGTTGCAGAATTGAAGCATCTATGGTCTGATTTGGATCATTATGATCCTCTTGGGTTAGAGCACCCCGATTGTATAGCAAAAATGAGGAAATGGATTGAGCGCAGAAGGGTTATTGAATTCTTGAAAGGCCTAAATCCAGAGTTTGAAGGGAGAAAAGATGCTATGTTCCATCAAACTACTCTTCCTACCTTGGATGAGGCTATAGCAGCTATGGCTCAAGATGAGCTTAAGAGGAAAGTATTGCCTAAGGCTACACCACCTTCATCAAGTCCCACCTATGCAATGCTACAAGGTAAAGAGACTAGAGAGTGTTTTAATTGTGGTGAAATGGGGCATCTCATGCGTGATTGTCGTGCTCCTCGCAAGCCTAGTTATGGAAGAGGAAGAAGTGGTGATAGAGGTGGAGCAAGAGGTGGAAGAGGTTATGCAGGTAGAGCTAACAGAGGTAGAGGCTATGAGTATAGAGGTGATCACAGAGCTAATGTGGTCACTCTTGAAGAGGTTGTTCTGGACCTACAAATGTTGATGTTGCCAACCTTGTTCATTCTATCTCAGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCAGGACGCTCGCGGCTGCTGCAGCGAGCGGCGGTGACGGCAACACACAGCAGGTGCGTGAGCTGAGCAGGGAGGTCTGGAGGGGCAGCAGCTACAAGTGGGTTCCCCGGCCGTGCTTCTGCTTGTTGAGTTGGTTCCCAGCCGTGCTTCTGCGTGTTGGCTGGTGGTGGACTCTGTACTGTGGCTTGTGGTTGAGGGAAGATGCACTAGTGACTGTTGTTACTGTTGTTCTTCTTCAAGATTGAGGTAATCGAGATTGTTCTTGCTGCTACTACTGATTTACTGGGAAGAAAATACAGGGTAGAGGAATTGTTGGCTTGTTGTTAGTGCTGCTGGTGGAGTGTAGACAAGGAGAGTTTGCTTTGTTACAGCAGTTAGTTGAGTGCTGCTTGATTAAAATGGGGGAAAATCAGGGACTTGAACAAGTGATGGGTAAATTGGTGGACATGCTTGCAAAGAAATTTAGTGAGGCCCCAACTACAAGTAATGCAGTGATTCCTCATACTGAAACAATGCAAAAAATTGACTTGATGCAAAATGATATTAAGTTGGAGGGTGTCAAAAATTATTTAAGTTGGTCAAGGAGAGCATTGTTGATTTTGAAGACTAAGGGATTAGAAGGATATGTCACCGGAGAAGTGAAGGAGCCTGAGAGTGCTAGTGCAGAATGGAGGACTTGGAGCACTACCAACTCTTTAGTAGTAGCATGGTTGTTGACTTCACTTATCCCTGCTATTGCTACAACTGTTGAGACCATCTCAAGTGCAAGTGAGATGTGGAAAACTCTTACTAATCTCTACTCAGGAGAAGGAAATGTGATGCTAATGGTGGAGGCACAGGAGAAGATAAGTGCTTTGAGACAGGGGGAGCGTTCTATTGCAGAATATGTTGCAGAATTGAAGCATCTATGGTCTGATTTGGATCATTATGATCCTCTTGGGGTTAGAGCACCCCGATTGTATAGCAAAAATGAGGAAATGGATTGAGCGCAGAAGGGTTATTGAATTCTTGAAAGGCCTAAATCCAGAGTTTGAAGGGAGAAAAGATGCTATGTTCCATCAAACTACTCTTCCTACCTTGGATGAGGCTATAGCAGCTATGGCTCAAGATGAGCTTAAGAGGAAAGTATTGCCTAAGGCTACACCACCTTCATCAAGTCCCACCTATGCAATGCTACAAGGTAAAGAGACTAGAGAGTGTTTTAATTGTGGTGAAATGGGGCATCTCATGCGTGATTGTCGTGCTCCTCGCAAGCCTAGTTATGGAAGAGGAAGAAGTGGTGATAGAGGTGGAGCAAGAGGTGGAAGAGGTTATGCAGGTAGAGCTAACAGAGGTAGAGGCTATGAGTATAGAGGTGATCACAGAGCTAATGTGGTCACTCTTGAAGAGGGTTGTTCTGGACCTACAAATGTTGATGTTGCCAACCTTGTTCATTCTATCTCAGGTAACTCAAACCAAGCATTTATGTCAATCAATAGTTCTCATTCAAATTGGATACTTGACTCGGGTGCATCCAGACATGTCACGGGTATGTGTGGAGAATTTGCATCATATAAACCATACCCATTTACACGAAAAGAAACAATTGAAACTGCTGATGGAACATCATGCCCAGTTAAGGGAGAGGGAACAGTACAATGTACTCCTTCAATCACTTTATCATCAGTGTTATATATCCCTTCTTTTCCAGTGAATTTGATTTCAATAAGTTCTCTTGTTGATCATATGGATTGTCGGGTATCCCTTGATCGTGAGAATTGTTTAATTCAGGAGAGGCAAACAGGGAAGAAACTTGGGACTGGCATCAGGCGTGATGGACTTTGGTATTTGGATCGAAAGGAGACAAGTGAAGATGTATGTCTTGCATTGATGGCTTCTACAAGTAAAGAAGAGGCTAAGGTATTACTTTTGCATTGTCGATTGGGGCATATATCTTTTGAAACTATGAGCAAGATGTTTCCAGCAGAACTAAGTAGAGTGGATAAACATAAGTTAGTATGTGATGCATGTGAGTATGGAAAACATACAAGAACATCATATGTGAGTAGAGGACTCCGAAGTATGTTACCATTTATGCTAATTCACTCAGATGTTTGGACTTCACCTATGGTCTCTATGAGTGGAATGAAGTATTTTGTTACCTTTATTGATTGCTACTCTCGCATGACATGGTTATATCTTATGAGGCATAAGGATGAGGTGTTTAAATGCTTCCAGAATTTCTATGCATACATTAAAAATCATTTTAATGCTCGAGTTCAGTTTATTAAAACTGATAATGGCGGGGAGTATATAAACAATGAATTTAGTAGCTTTCTTTCATCAGAAGGAATATTGCATCAAACTTCTTATCCTGATACTCCTCCACAAAATGGGGTGGCTGAGAGAAAAAACCGTCATCTTTTGGAGACAGCTCGCTCATTGATGTATGCTATGAATGTACCTAAATTCTTGTGGAGTGAGGCAGTAATGACAGCAACTTATCTTATCAACCGCACGCCATCAAGGATACTTGGAATGCAGACACCATGTGAGATGATATTTGGAAAGAATGAATTTGTTGTTCCACCAAAAGTGTTTGGTTGCACTTGTTTTGTTAGAGATCATAGACCTTCCGTTGGAAAACTTGATCCTCGGGCTGTCAAATGCATCTTTATAGGCTATCCATCTGGCCAGAAGGGGTATAAGTGTTGGAGTCCATCAGAACGACGAACCTTTGTTAGTATGGATGTTACTTTTAGAGAATCTGTCCCATTCTACGGTGAGAAGACAGATTTAAGTTCTTTATTCGTTGATCTTGATAATTCAACTAGTGGTCATGATGGTCAACAGATGGAAGGTGAAATATTGGGTCCAAAGGGAGATGAACAATCAAAAAAGGAAAAGTTTGTGGTTGGTTCAATTCCATGTCCTATGGGTGGTCCTGTTGCACAGGAGCAAGAATGGAGGAAGCCACATGAAGAGGAAAATCTTCAAGTATACACAAGGAGAACAAGGTGTCCAGTAATCCAACAAGTTGAAGAGGATAATCAGGTAGAGAAAGATGTAAGTCATGAGCAAGGGTCTTTGGAGTCAGGGGGAGAAGAAGAGGAAGTTAGAGAAGAATCTGACTTACCAATTGCTGTCAGAAAGAGTGTGAGAAGTAATGCAGGTAAACCTCCACTAAGGTATGGTTTTGAAGATCAAGATGAGGGTGATGAAGAAAATAATATATCCAACTTTGTTTCCTATGACTCCTTGTCATCCACATATAAAGCCTTTGTAGCATCACTAGATTCAATGGAAATCCCAAAGGATTGGAGAGAAGCAAAGCAAGATCCAAGGTGGCATCAAGCTATGTTAGATGAACTAGAGGCTCTTGAAAAGAACAAAACATGGGATCTTGTACCATTTCCTGAAGGAAAGAAAGTTGTCAACTGTAAGTGGGTTTATACAGTAAAGCAAAATCCTAATGGAAAGGTGGAAAGATACAAAGCAAGGCTGGTGGCTAAGGGATATAGTCAAACATATGGAATTGATTATGATGAAACTTTTGCACCAGTAGCAAAGATGAGCACGGTAAGAACTCTCATATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATGAGGGAGTTTTGGAATTAGAATTTGTAACGTCTAGTGGACAAGTTGCTGATTGTTTAACAAAGGGTTTAGGTGTTAAAGAGTGTAATCGTTCGTGTGACAAGATGGGTATGATAGATATCTATCACCCATCTTGAGGGGGAGTGTTGGGCTGTAAATAGAATAGTGTGTGTGTGTGTTTGTGTGCTGGCCCATCAGCTAGAGGCCCATCTACTCATGTATATGTAAATAACGATAGCAATACTGAAGGGGTGAAGCTTCCAGAGAAAAATTCACAAACTACAGGCTGCTCCAGGAAACCTCAACTAGCCAGGACATGGTAAGCAACTTGCTACGTATTATCAAGCGAAACAACGATCGCTGGCTTCGACTGCAGGAACCGGCACTACAGATCCTTGCACAGGTTGCATTGGGGCCTTATACTGGGCTCATGACCAAGGAAGAGTTTGTTAGTCTGCTTCGGGACATCTTCTTCGGCAACAAGGATAACATTGAGGAGAAAAGCAGGTGAACTGCTTGTAAAATCTCTCTCAACTCCAAGTAACGGCGACGGGATAGCAGGGACCATCATGGAAATCTTGTGTGAAGGCGACTCCAAGGATGTTTTGGATATAAGGAGATACGGCACCGTGGTTGATCAACTCACTGAAATGCTTGTCAAGGACAAGCAGTGCCAGATTAGCGCAGCAGCAATATTGGAGCACCTATGTTCTCGCTTCCTGAAGAGCTGCCAACTATCGAAGCAGGATGCCATCAATCTTTTGACAACGGTAAATCTCTGCTATTTCCTCCTCTTGGTCTAAACTCTAAACCGTAAATAGTGTTATATTTCCTGCTAGTGCTAATTTGATGCCTAAATTAAGTGATGTGTGATCACTGAATCATAGTAGTTTGCGGTAGGTATTTCATTTCACTGAATCAGCATATACATACATGGCACGATTGTAAAATCGTTTCTCTCAATTATAAATCGTTTTGATTTTTTTCCTAGTCAAATTTCTTTTAAGTTTGACCAAGTTTATAGAAAAATATAAACTTAACAAAGTTTGACTAGGAAAAAAATCAAACGATGTATAATATGAAATGGAGGGAGTATTGTGTATATTCTTATTCCTTTGAGATAACTTTTATTTTGTGCTGCTATATACAGGTTCTGGGCCTAATATTGTCCAGTAATACGGAAAGAAATGCAGTGGCAGGTTCAGATTCAAGCAACTATGCAGGTGCTGCGACAGAGGCGAGAGGAAGCGACTATTCTGCAATAGCCAGAGATGAAGAAAGCCAACCGCCAAAAGATGCCGTTCAGGACAAGTCCCCTACGGAGCAAGATGATAAACTATCTCAGGAAAAGAAATTGCTTGCGGCCTTGCTATCCTTTACAATGGTGATATGCGAGAAACTGATTGATGCAGATGACTTCTCTAATGTTGCTCATGTGGACAGAGAACTGTTGAAGAAGCTGATCGATAGAGATAATAGATGTAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027141