BGIOSGA027167

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Revision as of 07:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027167| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027167, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA027167

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027167, complete gene.

LocusTag

OSJNBA0030G18.2-1

Ensembl Transcript ID

BGIOSGA027167-TA

Ensembl Protein ID

BGIOSGA027167-PA

Length

5809

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15834537..15840345

Sequence Coding Region

15839931..15840345,15839681..15839820,15838943..15839020,15838675..15838754,15837685..15837769
,15836267..15836686,15835409..15835516,15835248..15835315,15834977..15835088
,15834846..15834917,15834710..15834763,15834537..15834626

Genome Context

<gbrowseImage1> name=IndicaChromosome08:15834537..15840345 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:15834537..15840345 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCGCCCTCCTCTCCCCCTCATCAGCGAGTGCCCACCGTCTGCCGCGCCCCATCAGCTCCCCGCCGCTCGGGCGCGCCGCCTCGGCCACCAGCATCGGTTCCTCCTTCTTCCCCCTCTGCTCCTCCCCTCCGTCCTCCGGCTCTTGCTCCTTGCGGAGGGCCAGCTCCGCGGGCGGCGCAAGCGAGCCAGAAGCGTCGGGGGCCACCTCCCTCGACGCCGACTTGCTCAGGCGTGTCGCCGGCGCCGCGGACGCCGGCGAGGCGCTGGACATCGTCGCGGAGTCGGCGGGAGGCACGGGCGGTCTGGACGCGTCCGACTGTAACGCGATCGTCGCGGCGGCGCTTGACCGGGGCAACGTGGAGCTAGCGCTCTCGGTGTTCGAGGCGATGCGATCCGGCTTTGCACGAGCTGGGGCCTGGAGGTGGGCGAGGCCAGACGTGCGGACGTACGCATTGCTTGTCCAGCGATTGGCAGCTGCTCTGCGTGTTTCTGATGCTCTTAGGATAATCGATTATGTATCTCGCGCAGGCATTTCTTCGGCAGAGGAGGTCCCATTTGGGATGATTATTCGCTGTCCAAGCTGCATGGTAGCAGTCGCAGTTGCACAGCCCCAGCATGGAACTCAGACTGTTTCTTGTTCAAAATGCCGATATCAGTACGAACTATTTTCTGGAGATATCATGAGCATCGAGTCTGAAGAAGTTAGCATGGACATTTCAGCTTTGGACAAGGCATTGCGATTTATAAATGTGATAAAAGACGGTCTTCCAGCTGCTGTGCACTCTATTGTGATTCGCACACCTTCAGGAACAGCCCGTACCCATAGATTTGCTACGCAGACTGTAGAACTGCCTGCTCAAGAAGGAGAAAGAGTGACCATTTCCTTGGCTGCCCCATCAAATGTTTATCGTGAAATGGGTCCCCTTAAGATTTCTGCACGCTCACAAGGGTTTAGACCAGGAGAACCCATGTCTCTCACCAATCACATCAACAGACAAGTCTCAAGATTGCTAAGAGCTCCATCAAAGAACGAGGGACCATTCGTCTTTAATCCATATTTGTTGGTCGGTGTTCTTGCTCTTCTTGCCTCTGGAGATGCTGCTTCTGCATTCATCGACCCAAGCCTCCCTAGATTTATTACAGCAACTGCTTTTGCATCAGCTGCTGTTGGAACAGCACTAAATCAAGTGATCCTGCCAGAGATTCGAAAGCTTCCACAAAAGACAGTAGATATAATTGCTGTTCGGCAGCAACTTTTATCTCAGTACGACATGCTTCAGACTCGTCTAAAGGATCTGAAACAACTTTCCGAAAAGGAGGTGTGGATGCTGGCAAGAATGTCTCAACTAGAGAACAAGATATTAGCAGTAGGTGAACCATCATATCGTGCTCGTCGAGGTAGAGTGAAGAGGGTACTTGAAAGCTTGGAAAGTACACTCCTGGCAAAGATTGAGCTGATGGAAAGTTATGCAAAAGTAATAGAGCAAATTTTATATATGTTGTGTTCTATGATTGAAATTGAAGTTGAGATGGACTCAGATGTTATTGTTGCTGAAGCAGCAAGTAGTGCAGAAAGGATATCAGAACAAATACAGCAACTAATGGAGATTGATAGTCTTGAAGAGCAATGGCGTATACAAGCTGAGGCTAATGACGAAGCAGAAAGGCTGCTTAATTCAGATTCTTCAGAAACATTTTCCGCTGAGCATGTATAA</cdnaseq>

Protein Sequence

<aaseq>MALALLSPSSASAHRLPRPISSPPLGRAASATSIGSSFFPLCSSPPSSGSCSLRRASSAGGASEPEASGATSLDADLLRRVAGAADAGEALDIVAESAGGTGGLDASDCNAIVAAALDRGNVELALSVFEAMRSGFARAGAWRWARPDVRTYALLVQRLAAALRVSDALRIIDYVSRAGISSAEEVPFGMIIRCPSCMVAVAVAQPQHGTQTVSCSKCRYQYELFSGDIMSIESEEVSMDISALDKALRFINVIKDGLPAAVHSIVIRTPSGTARTHRFATQTVELPAQEGERVTISLAAPSNVYREMGPLKISARSQGFRPGEPMSLTNHINRQVSRLLRAPSKNEGPFVFNPYLLVGVLALLASGDAASAFIDPSLPRFITATAFASAAVGTALNQVILPEIRKLPQKTVDIIAVRQQLLSQYDMLQTRLKDLKQLSEKEVWMLARMSQLENKILAVGEPSYRARRGRVKRVLESLESTLLAKIELMESYAKVIEQILYMLCSMIEIEVEMDSDVIVAEAASSAERISEQIQQLMEIDSLEEQWRIQAEANDEAERLLNSDSSETFSAEHV</aaseq>

Gene Sequence

<dnaseqindica>1..415#526..665#1326..1403#1592..1671#2577..2661#3660..4079#4830..4937#5031..5098#5258..5369#5429..5500#5583..5636#5720..5809#ATGGCGCTCGCCCTCCTCTCCCCCTCATCAGCGAGTGCCCACCGTCTGCCGCGCCCCATCAGCTCCCCGCCGCTCGGGCGCGCCGCCTCGGCCACCAGCATCGGTTCCTCCTTCTTCCCCCTCTGCTCCTCCCCTCCGTCCTCCGGCTCTTGCTCCTTGCGGAGGGCCAGCTCCGCGGGCGGCGCAAGCGAGCCAGAAGCGTCGGGGGCCACCTCCCTCGACGCCGACTTGCTCAGGCGTGTCGCCGGCGCCGCGGACGCCGGCGAGGCGCTGGACATCGTCGCGGAGTCGGCGGGAGGCACGGGCGGTCTGGACGCGTCCGACTGTAACGCGATCGTCGCGGCGGCGCTTGACCGGGGCAACGTGGAGCTAGCGCTCTCGGTGTTCGAGGCGATGCGATCCGGCTTTGCACGAGGTGAGGGCATCGTATCACTCCTTACGTTTTTTCTTTTATCACGAAATGTAGTGAATTATGTTTTGGATTGAGCGTACTGAGTCCCTGTGGTGTGGAGTGCCGGCTTGCAGCTGGGGCCTGGAGGTGGGCGAGGCCAGACGTGCGGACGTACGCATTGCTTGTCCAGCGATTGGCAGCTGCTCTGCGTGTTTCTGATGCTCTTAGGATAATCGATTATGTATCTCGCGCAGGCATTTCTTCGGCAGAGGAGGTGAGCTTTGGCGTCGCAGACTAGCATGTCTGACGATGTGTATGGTGCTTTGCTGTTTGGTTTGCATGCATGATGTTTGGATGTTTTAGTGGCATTTGACAAATGATGGAAGCTTTTTATTCTTGCTTTAAAACCTTGATCTGCAAACATGATTTGTCACCTACCTGTACCTCATCATTTGTCCAATTACTGGTTTCATTTGTCCAAGGCAATTCAAGCTTAATTCTAACTAGAACCGAATTTGCAGAGGAATAGTACTAAACGTAGATTTCTGGAGATAGGTAAGTACAATCAGTTCATCTACGGAAATCCTATTTATTATCAAAACAATTAGTGCAAAAGGTCCCAACAAGGATAGTCTTGCCATAGCAATATCAGTGCCCCTCCAACGAAACTCCCTTTTGGTTTGATGTAACATATAACTTTGAATAATCTAGTCCCATTAATATCCACAAGCCTGGCAACAATCCTTATGGTTCTGATCCTGTCTCAAAGTATTGATAATTCTGGTGCATCATACTTTAATTTTAAAAATTTACATAAGAGTGTCTTGTTGAATGGAAGTATATTTGATGTAGAGAAAACTTGAGACACTTCTAAAGGAAAACACAGTGAATGAATGTCACTACACTTCTAAATGATAGATTTTACTTGTTACAGGTCCCATTTGGGATGATTATTCGCTGTCCAAGCTGCATGGTAGCAGTCGCAGTTGCACAGCCCCAGCATGGAACTCAGGTTTGATGCTGTACAAGTATCTTGTACCTCTAATCTAATTGTTTAAGCTACTCACTTAGCTCGCATGATGCGATTTATGAAACAAAATTTTACAGTTTGAGCAAATTTTTAGAGATGACATCTTAGGAAAATATAGATTATTTTTAATGCTGTAATGGAAATCTTAGCATTATTTTATTACTTTACAGACTGTTTCTTGTTCAAAATGCCGATATCAGTACGAACTATTTTCTGGAGATATCATGAGCATCGAGTCTGAAGAAGTTAGGTTAGTTCTTGGAGCAGTTGCTTGGAGTTGTAAACTGTCAATGCTATGCCATGATCTTATTCTTTTTTCGGTTATATTTGTAGCTATGGATTATGGTGTTGTTTCTAGTAACTTTTGGAGCAATGTTCTTCTAAAACAGGTGTCCTGCCATTAACTGTGGAGGGACTCCAGTACTAACTTATTTTGCTAGAACTTAGAAGATACTCCCTCTGTTCCATTTTAAGTGCAGTTGTGAGTTTCCGTGTCCAACATTTGACAGCCCGTCTTATAAAAAAATAAAAATAAGTCACGCATAAAGTACTATTCATATTTTATCATCTAATAACAACAAAAATACTAATCATAAAAAAAATTTCAGATAAGACAAACAATCAAACGTTGGACATGGAAATCCATAACTGCACTTAAAATGGGATGGAGGGAGTGACATCTAAAAAGTAAACATTAGAACAATTAAAATAATTGATATATCAGTTAGCTTTGACTAATTAGCCATGTCTGTGATCTCATCGTTCGACTTATACTTTCTAATGTTTCCTTTAGATCCAGTGGTACGATTGGCTATTATATAGGTCTATGAACTGCTTATCCTGAGTGCTTAGGTATTACTCTGCAGATTATTGGGTTTCTGTGATGTCAAAAAGATTTATACATAATTTATTTTAGTGTTTGATAGGTACACATTGTCCTTCTGTATAACTCTCTCACAGAAATGGTTTATTACATTCCAATGATTATGCAACTTTGTACTATTTTGTAGTTTATCTGAAGTAACTTGATTGATATTGTTTTCATCTGTTATATCAGAAGATATTTTTGCACACCTCTATTACTTTCTCAATGGTTCCATATATGACACTGCTTCTAATATTACTTCTCTAAGGATCTCCTCCTGCCGAACGCAGCATGGACATTTCAGCTTTGGACAAGGCATTGCGATTTATAAATGTGATAAAAGACGGTCTTCCAGCTGCTGTGCACTCTATTGTGGTAGTTTCCCTTTCAAAAACCGCACAATAGATCTTAACTGTGCCATCATTTATTTCAAAGATCTTTACTTTTCAAATTTTTGAATAAATCATCGTTGCTCTTGATGGATATCAAGATATGAAGATGCCTCACATTAAACTAGATGTACTCCATATAATAGAACTGAAAGGTAAAACTCTCCCTGTTTTCTGTTCAACAATTGAGGTAAAAAAATGTTCCTCTTTATGACAAGTAGGATAACTGCTTGTTCATCAATGGTAGAAGGGAATTACACACATGGACATGTTTATCATCTTAGAGGTTATTCTTGCACTACCAGATACCATCACGCCAAGCAGTGTATCCATATGTGATTACAGCTGCCTTCCTTAAAAAAATCTTTTGTTGTACTTTTTCCAAATTTCCCAGAGTTTAAGAGTATGATGCTTCAGGTCTTGGCAACCAAGAAGATGCTTCCCCATGCACCATGTGAGGCAGAAGTGTTTTTTCATAGAAGTTTTTTGAAAGTAAACATGATATATTTTCACAAAATCTGTGGAAAACTCCAAAAATGACCAAGCGTTATTACATGTTTGGTTTGAACCTTGGCCCCACATTAGCAGCATGTATAGTATTTTGCCAAAATTCTGGGAACAAGTCGAACACTTGCTAACTGAGGTCAACACATTCACATTTTAGTTTGAATATTTGGCAACTGTTGACTTAGGACCAAACAGTCATCGAGAATTCTTCATGTGTTTCTTTCCAAATATCGTTCAATCCATTAATGCTAAATTTGATCACCAACATTTCTCTGTCATTTCTCACTCCCCCCTTAAGATAGTTGGGCCAGGGATTGGCTATCCAAATTTTCCTCTAGAGTGCTCCAACAAAACATTCCACGACGAAATTCAGCTGAATCTATTTTTTGTGATATCACACAGTTCTTATAATCTGTTGACAATGTTGTTCAGAACATGAGCCATATTCATGTAAATTGTGAGTTATTTATTTTGCAGATTCGCACACCTTCAGGAACAGCCCGTACCCATAGATTTGCTACGCAGACTGTAGAACTGCCTGCTCAAGAAGGAGAAAGAGTGACCATTTCCTTGGCTGCCCCATCAAATGTTTATCGTGAAATGGGTCCCCTTAAGATTTCTGCACGCTCACAAGGGTTTAGACCAGGAGAACCCATGTCTCTCACCAATCACATCAACAGACAAGTCTCAAGATTGCTAAGAGCTCCATCAAAGAACGAGGGACCATTCGTCTTTAATCCATATTTGTTGGTCGGTGTTCTTGCTCTTCTTGCCTCTGGAGATGCTGCTTCTGCATTCATCGACCCAAGCCTCCCTAGATTTATTACAGCAACTGCTTTTGCATCAGCTGCTGTTGGAACAGCACTAAATCAAGTGATCCTGCCAGAGATTCGAAAGGTAAGTAAACTCAAGGATTAGCATTCTTCACTAGGAGGAAACTTGAAAACTATGGGCAGGTAGTCGGAATGCTAATAGGGTCATGTAATACCAACGTATGGTGCTGGAGTCTTGTACCAACAATAGATCATGCAAGCAACTGTCTATAGCCTGCTCTGTTTTGCTTCCTTGTTCGATCAAGCTTACCCTATGGCATGCCATTACATAGCTAGAGTATCTAATTTACTTTGTTTCTCTTCAATCATACTCCCAATGGAAAGACTTGGCTGTGTATGTCCAATTGTGGATATAGAGGCTGGATTTCTATCCATTATCTACAAAAAATATTGATGAGAGTACTAGCATTTATATAGCAATGGCAAATCAGGAAGAAAAGAGACAAAGGTTCCTAAAAAATATTTTTGGTAAGAGTTGAGAAATCTAAAATGTCTTATATATTGGATAAGAGGGACTATAATTTCAAAAATATTTTTTTATCAGTACTTTTTTAGAGAAACCTAGTGCCTTATACTTCCATAGTTAAAAGGACATGCTATTTTCAAATTTGCAAAGCCAACAAGATGCACTTTGACCACAAAATTTTATCATTGTGCATTTTATAAAAGTATTTTTTTCACATGTTTACTCAATTTTTTATATATCCAAATATTCATATTTTAGACAATATCTTATTATCTTATTAGTAGTTTTTGGTTAGAAGCTACGTTGTCCATTATATTCTCTCTGACCTAAATTCGATGTTATTTTCAGCTTCCACAAAAGACAGTAGATATAATTGCTGTTCGGCAGCAACTTTTATCTCAGTACGACATGCTTCAGACTCGTCTAAAGGATCTGAAACAACTTTCCGAAAAGGAGGTTAAAATCTGTAATCTCTAATTAGTTTATTTTCTGCTAAAAGTAAAGTCCTGAAAATCATGAACTCCTAAACTCCTAAATTTATTTTCAAAGGTGTGGATGCTGGCAAGAATGTCTCAACTAGAGAACAAGATATTAGCAGTAGGTGAACCATCATATCGGTAATTTCATACAGTTCCAACAGTTTATTTTATTGTTCTAGTTTAACTTTATCTATTCACAAATATACTTATATAACATGGTTGTTTGTTAGAACTTGTTCTACTACAGAGTTTTTTTCTTTTTGAAAATAATGAAGTTTTGATCAAACTTATTTCCAGTGCTCGTCGAGGTAGAGTGAAGAGGGTACTTGAAAGCTTGGAAAGTACACTCCTGGCAAAGATTGAGCTGATGGAAAGTTATGCAAAAGTAATAGAGCAAATTTTATATATGGTATGTATAACTCACGTTTATTATAGCTAAATAGTGAAATGTTGGATATGCCACTGCAGTTGTGTTCTATGATTGAAATTGAAGTTGAGATGGACTCAGATGTTATTGTTGCTGAAGCAGCAAGTAGTGCAGTAAGTTCAAGTTATTTAGCTATCCTATTTATGCATCATGTGGATGAAGTATGATTACTAATAATCAGTGTCCTGATTCCAGGAAAGGATATCAGAACAAATACAGCAACTAATGGAGATTGATAGTCTTGAAGAGGCAAGTATATCCTATGTTCATCAGCTTACATTCAACAGAAAATGTTTCGTAAGGACTAACAGTTGCTTCTAATACTTATTTAGCAATGGCGTATACAAGCTGAGGCTAATGACGAAGCAGAAAGGCTGCTTAATTCAGATTCTTCAGAAACATTTTCCGCTGAGCATGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027167