BGIOSGA027200

From RiceWiki
Revision as of 07:39, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027200| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027200, complete gene.| tag = OJ1136_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027200

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027200, complete gene.

LocusTag

OJ1136_D12.114

Ensembl Transcript ID

BGIOSGA027200-TA

Ensembl Protein ID

BGIOSGA027200-PA

Length

5414

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15017445..15022858

Sequence Coding Region

15022462..15022858,15021462..15021506,15021265..15021337,15020576..15020673,15018376..15018446
,15017445..15017570

Genome Context

<gbrowseImage1> name=IndicaChromosome08:15017445..15022858 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:15017445..15022858 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCATCTGGCGCCGCTCTTCCTCCTCCTCCTCCCGCTCCACGCCGCCGCCACGCCGTCCGCCCACCCGGCCTACCCCAACGAGCCGCCGTCCTGCGCGGCGGCGGCGGCGGCGGCGGTGCCGGTGCCGGAGCGGCGGGAGGCGCATGGCGGGGGGCGCATCCTGGACATAACCCACTACTACCGGGAGGACATGCCGTCGTGGGAGTCGGACGGCGGGGTCGGCCAATTCCTGTGGCTCCCCGCCTCCATGCGCAACGGTTCCCGCGCCAACAACTCCGAGATGCGCCTGCCCACCCACACCGGCACCCACGTAGACGCCCCGGGCCACGTCTTCCAGCACTACTTCGACGCCGGCTTCGACGTCGACTCCCTCGACCTCGAAGTGCTCAATGGTCTGGCATTGTTAGTTGATGTTCCAAGAGATGATAATATTACAGCTAAAATGATGGAATCATTACATATTCCTAAAGGAATTCAACGAGTGCTATTTAGAACACTAAATACTGACAGGCAACTAATGTGGAAGAAAGAATTTGACACTAGTTATGTGGGTTTTATGGAGGATGGCGCACAATGGTTGGTAGACAACACAGATATTAAACTTGTCGGAATAGACTATTTGTCTGTTGCAGCTTTTGATGACTTGATCCCGTCACATTTAGTTCTTCTCAAAAACAGGGATATCATTCTTGTCGAGGGCCTCAAACTGGAAAATATCATGCCTGGGATATACTCCTTGCACTGCCTGCCACTTCGGCTGCGGGGTGCTGAAGGTTCACCAATCAGATGCATCCTTATAAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAHLAPLFLLLLPLHAAATPSAHPAYPNEPPSCAAAAAAAVPVPERREAHGGGRILDITHYYREDMPSWESDGGVGQFLWLPASMRNGSRANNSEMRLPTHTGTHVDAPGHVFQHYFDAGFDVDSLDLEVLNGLALLVDVPRDDNITAKMMESLHIPKGIQRVLFRTLNTDRQLMWKKEFDTSYVGFMEDGAQWLVDNTDIKLVGIDYLSVAAFDDLIPSHLVLLKNRDIILVEGLKLENIMPGIYSLHCLPLRLRGAEGSPIRCILIK</aaseq>

Gene Sequence

<dnaseqindica>1..397#1353..1397#1522..1594#2186..2283#4413..4483#5289..5414#ATGGCTCATCTGGCGCCGCTCTTCCTCCTCCTCCTCCCGCTCCACGCCGCCGCCACGCCGTCCGCCCACCCGGCCTACCCCAACGAGCCGCCGTCCTGCGCGGCGGCGGCGGCGGCGGCGGTGCCGGTGCCGGAGCGGCGGGAGGCGCATGGCGGGGGGCGCATCCTGGACATAACCCACTACTACCGGGAGGACATGCCGTCGTGGGAGTCGGACGGCGGGGTCGGCCAATTCCTGTGGCTCCCCGCCTCCATGCGCAACGGTTCCCGCGCCAACAACTCCGAGATGCGCCTGCCCACCCACACCGGCACCCACGTAGACGCCCCGGGCCACGTCTTCCAGCACTACTTCGACGCCGGCTTCGACGTCGACTCCCTCGACCTCGAAGTGCTCAATGGTTGGTTAGCTCAAGCACTCAATCGCATCATGGATTGATTGGATTCCTTCCTTTTGCTTATTTTGTGATTTTTTTTTGATTGTATACTAGTATGTGGGAATTTTTCATTGCCGATCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGAGGGAGAGAGAGAGAGTTAATTGAAAATGTTAAGGATTTGAGGTATTATTACTAGAAACTATTGGAATATATGGCGTGGCTTTGAGCCTTCGGATCTGCGATGCAAAGTTTGTAGATTAGATGAATGACAGCTATGAGATTCGAGCTTTTCTGTGACATCCATGAAGCAGATTTCAACAGGAGGAGAGGAACAGTCCATGTGTTCCTTGTGTAAGTGAGTGAAGGGAGTTTGGGGCTAAAAACCTACATGACATCAATGAAATTAGCCTAATGAAACCCCTCTTTCTAGTTCTTCCTACTTCCAGTTCTCGAAGCATTCCCATATTTCTTGTTTCGTGTCTCAGTTTGATCTCAGATCACCATAATCTTCCCATGGACAATCTTGACTAGTTAGTTCGGTGGTGGAGTTCTCATGTTGTTGCGATTCTTTTGCAATAGGAAATTTGTGCCAGCTATTCTGGATAAAATGAACACATGGTATTCTGTTGGTAGCAGATTTCCATCAGAAGTTTCCCCAATTAAAATTGGTGCTACCATCCAAACTGTATTTTAGTGTACAAATTACAGTGCTATTCTTTTGGAGAAAGACGTGTCATGGTATGGATATGATGTCTTAACCTCTAATTCGGCAATTCGAATACCCAAGCTGAAAATCCAATGTCCACAACTGCATAATCATGTCTTATACTGACATTGGAATCATTACATGTCAACCAATTAGATCTACATGAGAATATATGGAATTGCATTACATTAACAACTGATTTTCTGTTACAGGTCTGGCATTGTTAGTTGATGTTCCAAGAGATGATAATATTACAGGTAACTAATTCTTGTTGTTTAATCCATCAAGATACTGTTAGCATAGTAAAATTGTAGTTATTGTTTACTTATCTCAGCATGTGTTAGTCAAACCTAACTATTGAATTTATTGTACTCGATGCAGCTAAAATGATGGAATCATTACATATTCCTAAAGGAATTCAACGAGTGCTATTTAGAACACTAAATACTGACAGGTAATGGACTCAGCATAGTTATATGCTCATTTGTGGTAAGCATGCCTAGTTAACTGTTATGCCAAAAAAGAATCCATTATATATACGAGCACACATATAGTTCAAAATCTTCTGCTTTATCTGTTCAGCATGGTAAAGGCATTCTTTCTCTCTTCCTTAATCTATGTCTACCGACCCTCTATATTTCCTTCTGAGATCCACCCCATTGATTGTTAAATCTGTTGGCAGTGGGTCCTACTGTATACTCCTTGCATTTACATTTAGTTTACTCACTCTTGTTTTCTCAGATATTTTAACATCATGATTAATTGAGCTCATTATGCTACTAGAGCCACTAGCCAAAATCACCACCTTTTGGTTTCTATATGAAAACCCAAAGTGCGTGGAGCTTTTTTAGTTGCTGCAACGGCATGCCCTTTTCATGTGTTTCTCTATCTATTTAGAAATGATGCGCTGCTGTTTACCCTATTTCTTCCTAATTGTGTATTTTGTGCATCCGTAGTCTACGGATAGTTTTATTGCGTATTCTTATAATCTATCTATTATGGAATTTCCTGAAATACCGCACTTAGTAAAGCTGTCATCTTGCAGGCAACTAATGTGGAAGAAAGAATTTGACACTAGTTATGTGGGTTTTATGGAGGATGGCGCACAATGGTTGGTAGACAACACAGATATTAAACTTGTCGGTGAGTTTGAAGTAGCAATGCATCCTTTTGAGGTTCCTTCACTATATTTGTAACCGACTCTTATATTATTTAGCGTATGCAACTATCCGTACAATTGACTCTTATCTTAAGCTTGCTCATGCAAATGATTATTGTTTTGGCATGGTTTGCTTTGCAACTTTTTGTTTTTACAAATATATCTCCAAGTGAGACTTTTGCTAAAAATGGACCCTAAGCAGAGAGAAGTGACATTTGGCGCTGTGTGTACATAGCACAACATAGCAAGATTTGGCATCGTGTAGGTTTCTGTATGGATGTTGCGTGGAACCTTATGGTGTGTTTGGTTGGGCGTATGAGACTGGATGGGAGATGGCCGCCCGAGTTTTTGTGGTGTTTGGTTGGAGGGCATGATGGATGGGGCGGCCCGGAATAGGGAATATTCCCTCAATATGCTGGATGAGTGCATATGGCCGATTTGGCTGGATGAAGCCATCCAGTTTTGGACTGGGTGATGTGTCCTGTTCTGATTTGCTGTGGTTGGTTTGATTTCGTGTTAAGCAAGCTCCAAATGATTTTTTCTCGTAAACTGTTTATCTAATTTATGATTTGATTACACCATTATATTTGTTATAATTAAATCTTTAAAACAAGATCTCAGATGATTATATTTTGATAAAAAAATATATATGACAAATGGGTCCCACTAACTTTTGGTTTTTCCCATCCATGCTATATCCCTCCAACCAAACAAGAAATTGGATCGCCATATCCATACAAACCAAACAAAAAATTGGATCACCATATCCAACAAAATATGGATGGCTATATCCTATCCATGCATGACCGTGAACCAAACACACCCTTAGTGGCTCCACTGGCCATTTTACATGCCAGCCTACATGTTGTTCAATCCTGCAGCATCGTGTTATGAACAGACGGCACCAAATGTCATAGCACCATTTGGAAGGGTTCTATTTCTGTAAAAAGTTTTTTCTAGGGGTCCATTTGTAAAAAAATGTTTTCCGAAAGGTCTACTTTGTGAAAATCACTAGTCTATTCCTGTTTTTTTTTTTTGGGTACCATTTATCATATTAGATTAAAATTACAGTGTCTTCCTTCCAAAAACATATTATTGTTTCTTGTACTTACGGACTTACCCTCCCTTGATAATCATCTCAATGTCTAGTTTGGTCCGATGAATAAGCATTTAGCTAGAAGCCTCTTCTCATGTTTCACAAGTGTGCATCCCCATCTTACATGTCTTCCTGTTTGAGCAATGTAATTGTGCAAATTTGCACTTCTAATGTGATGATCTTCAGAAATCATGACCTTAAGGGACTTCAAAGAGTTTTTGTGTGTTATTTCATACTAGTATACTTGAACTCATCTTTCAGGATATTGTGTGTCTCAGGCAGAAGCAGACATCAGCTGACCTTCTGTTCAAGGATGATATTAATATTGAATAGCACGTTTGCAGGTTTAAGTTTGTGTCACGAGATAGGTCTTGAAACATATAACACCTATGGAAATGGTATACTGATCTAGTATGGTTGCCTGGGGGATGGGGTACTGCATGCTGTGTATACTCCATGCGACATAGCATTAGCTCCTGTGAAAATCCAGAATTATTATGTACTTGTATATAAAAAACATGGGCCAAAACTAATAAGTTTCTGAGTACCCTGGGTCAGCTTTTTCTTTTTTTTAATATTGAATGATTTTTTTTCAAATAATAGTGTCTGGAGCATACATGACATGCTAACTAATACACATTTTTCTATGAATCAATGCTGAAAAACCAGAGAAAAAAATTACTTAGGAACAAAATATTTTTCTTGACTTGTGACCCTCCACTTAAGGTCCTATTTAATCAAGTAGTGATGCAAATGAATAAGATTGAAAGCATGGTAATTAAAGTCAAGTAGGAAATGTCATGGTCTGTTTTGACACTTTTTGGTAGATAATGCTCCTTTTTTTTGTTTTTTAGTTCTTTCATTCACTTTATATGTACTATCAGGGCAAACTTCTGTATTCTTGTTTATTTAACCTTGGACGATAGTGCTCTAGAGGTAATATTTTTATCGTGGTGGTGTGGTGCCCTACACTACAGTTATTGTTCTGTAATTTCTCATTTCTGTTGTCATTTTCAGGAATAGACTATTTGTCTGTTGCAGCTTTTGATGACTTGATCCCGTCACATTTAGTTCTTCTCAAAAACAGGGTATGGACATGTTTCCTGGAGTAATTTTGTTATGTTCACATTCACTTTCAGAATATTTATGGCTCTTTTATCTTTGTTATTCATCTTACGTTTGTTCTGATGTTCTGAACTTTATCTTGCCTATCCTGTATTTCCTATACTCGGTCACTTACAACATCCAGCTTCCAATAGAAATCTGATAGGAATGCGATGTAGTTAAGAAATAGTTGAGTGTTGATATATATTGTCCTCACCTAAAATTTTCTTATTCTTCCTAGCTTGGCTATGTTGAATTCAATGTGCTAATATCCTGTTAGGCTTCCTGATGACATTAATTTCTAAACTGAACAATGTAAAGTTGAAAAAGTTGATTGACAATTCGGTATGATATATCAAAGTATCCAAGGATACCAGTAGTCACTCCTGAAATTTGTTGTGCCATTTTTTTTCTACGAAGACTAATTTATGTGTGGCACTCTGCCCAAAAGAAAAAGTGAGGCACTGTTGGCACAGCACGATATATTACACAAACTGATATGTGCCATATGGCAGAGTCAAACTTGTCCATACACTTGCAAGATGCGGATAAATCACCAGACTCCAGTGTGCATATAACACAAGTGAGCACCTCTAGATATATGGAATGACAAGAAAAAAAGTTTGGTAGCAGGAATACCCACAATCTGGTATCAACTTAATTAGGAGTACCATGTTTTTCCAAGAAGCTGATGTGCTTATGAGTGTTGCAGCTCATATTCTGCCGTATGGAATGTGAATGTTACCCTACGGGTATGATCGACGTAATATATTCTATTTTGTTTTTCAGGATATCATTCTTGTCGAGGGCCTCAAACTGGAAAATATCATGCCTGGGATATACTCCTTGCACTGCCTGCCACTTCGGCTGCGGGGTGCTGAAGGTTCACCAATCAGATGCATCCTTATAAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027200