Os11g0139400

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Revision as of 08:59, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0139400| Description = Protein of unknown function DUF250 domain containing protein| Version = NM_001072236.1 GI:115484084 GeneID:4349727| ...")
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Gene Name

Os11g0139400

Description

Protein of unknown function DUF250 domain containing protein

Version

NM_001072236.1 GI:115484084 GeneID:4349727

Length

1589 bp

Definition

Oryza sativa Japonica Group Os11g0139400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1800787..1802375

Sequence Coding Region

1800869..1802035

Expression

GEO Profiles:Os11g0139400

Genome Context

<gbrowseImage1> name=NC_008404:1800787..1802375 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1800787..1802375 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccgccggcgacaacgcagccaaggcccctgcagccgcagccggcagtaatgggaagggcactgccgcctccatggacgtcgtgtcgtcgtcgtcgtcgtcttctccggcgccggcgccgtcggtgctcaagtcggtgctgctctcctacgcgtacgtgagcgtgtggatcacactcagcttctcggtgatcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctccctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctccgcgtcgtcgccgtgccggcgtcgccgcccatgacgcccagcctctacgccgcctccgtcgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatctacctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccctcgccgtcgcgttccgcaccgactccttccgccgcgcctccatgctcaacatgctcggcatctccgcgggcgtcgccgtcgcggcctacggcgaggctcggttcgacgcgttcggcgtcatgctgcagctcgccgccgtcgccgccgaggccacgcggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacctcgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccatggtacttcgtcgagctgccgcggctgcgcgccgccgcgggcgccgccgcccggcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggtgttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacctcgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggggctcaaggccagggaggcagagaggagggccgcgtcaatggcgacggcgaaggacggcgacgcagaagccggtgcgcggctgctgccggagaaagatgccggtgagcagaagaactga</cdnaseq>

Protein Sequence

<aaseq>MGAAGDNAAKAPAAAAGSNGKGTAASMDVVSSSSSSSPAPAPSV LKSVLLSYAYVSVWITLSFSVIVYNKYILDPKMYNWPFPISLTMIHMAFCASLAVVLV RVLRVVAVPASPPMTPSLYAASVVPIGALYALSLWFSNSAYIYLSVSFIQMLKALMPV AVYSLAVAFRTDSFRRASMLNMLGISAGVAVAAYGEARFDAFGVMLQLAAVAAEATRL VLIQILLTSKGMSLNPITSLYYIAPCCLVFLTLPWYFVELPRLRAAAGAAARPDVFVF GTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWTVIKDTVTPVNLVGYG IAFLGVAYYNHAKLQGLKAREAERRAASMATAKDGDAEAGARLLPEKDAGEQKN</aaseq>

Gene Sequence

<dnaseqindica>83..1249#tacgcgcgcgcgcccaccaccgccggcgtcacacctcgccaggcgccagccacatcaaagcttcctctcctacctcgcccaaatgggcgccgccggcgacaacgcagccaaggcccctgcagccgcagccggcagtaatgggaagggcactgccgcctccatggacgtcgtgtcgtcgtcgtcgtcgtcttctccggcgccggcgccgtcggtgctcaagtcggtgctgctctcctacgcgtacgtgagcgtgtggatcacactcagcttctcggtgatcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctccctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctccgcgtcgtcgccgtgccggcgtcgccgcccatgacgcccagcctctacgccgcctccgtcgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatctacctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccctcgccgtcgcgttccgcaccgactccttccgccgcgcctccatgctcaacatgctcggcatctccgcgggcgtcgccgtcgcggcctacggcgaggctcggttcgacgcgttcggcgtcatgctgcagctcgccgccgtcgccgccgaggccacgcggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacctcgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccatggtacttcgtcgagctgccgcggctgcgcgccgccgcgggcgccgccgcccggcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggtgttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacctcgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggggctcaaggccagggaggcagagaggagggccgcgtcaatggcgacggcgaaggacggcgacgcagaagccggtgcgcggctgctgccggagaaagatgccggtgagcagaagaactgatcaaagtcgaacaccaagcatagtacattaatgaaggttgataaatcaacggcattcctttgtcatctttaggatgcctgaactgtggtttaattgacccttgatgaacttcaagctgcatatttaagtttgtgaccattcattatcatggagaatacagatcattttagatatgcatttgattgaggaacaatgcatgtgattcagcaggagatagcaacacaggaatgatttatccaatcccttttcgtcaaaaggggcaagttatgtagatgcatgatgtaacgggagaacaactcgaaacttcttaatccattggctactaaatatctttagtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0139400, RefSeq:Os11g0139400