Os09g0314400

From RiceWiki
Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0314400| Description = Protein phosphatase 2C-like domain containing protein| Version = NM_001069375.1 GI:115478489 GeneID:4346692| Length ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0314400

Description

Protein phosphatase 2C-like domain containing protein

Version

NM_001069375.1 GI:115478489 GeneID:4346692

Length

6471 bp

Definition

Oryza sativa Japonica Group Os09g0314400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9168725..9175195

Sequence Coding Region

9169173..9169280,9169618..9169665,9169775..9169864,9170379..9170462,9171019..9171180
,9171629..9171681,9172663..9172707,9173740..9173776,9174112..9174220
,9174291..9174658

Expression

GEO Profiles:Os09g0314400

Genome Context

<gbrowseImage1> name=NC_008402:9168725..9175195 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9168725..9175195 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcatcaaaagcgtgaagcaaccagcgacaacggcggtggcgatgaagagtgggcatcaaaacgccccaaagttgtcggcgctgctgctgaaaaggagcacattctgacatctgacgcttcgcatgaaacgaatggcgatgaagctcaaggaggagatgcctctcgaaaggaaaacacggtgtcgacaaacccgtgtgtttcagatgagaaagcagcaaccaactcgaatgtttcaagtggccatggggtgattttgactagtgtggaagctgatgctgcagaagacaagggttgcaggcatactatggaagatgcatgggtgctgcttcctgatgctagcatggaatctccgggaaacctgaggtgcgctcatttcgcaatatatgatggacatggtggtcgcctggctgcagagtatgcacagaaacatttgcatcagaatgttattgcagcaggattaccacgtgagttgatggatgttaaagctgcaaagaaggccatcattgaaggttttcgtagaactgatgagtgcttactgcaagaaagtactaaaggaaactggcaagatggtgcaacagctgtctgtgtctgggtcctggggcagacggtggttgttgcaaatgctggagatgctaaagctgtattagctcgttccacatcagctgatggtgaaggtgcagtggatgatgccaaaagtcaactgaaggctattgttttgaccagagaacataaagcaatctttccacaagaacgtgctcgaatccaaaaggctggaggatctgttggccctaatggcagattacaaggtcgcattgaagtatctagagctttgggtgatcgtcagtttaagaaggttgggctgattgctacaccagacgtccactcctttgaagtaacgagaaaagatcattttattattcttgggtgtgatggcttatggggagtatttggaccaggtgatgctgttgaatttgtgcagaatcaattgaaggagacctcgtcagcgactctggcagtgcggcggctcgtgaaggaagctgttcgtgagaggcgttgcaaggacaactgcactgccgtgctgatcgtcttcaagcactag</cdnaseq>

Protein Sequence

<aaseq>MAHQKREATSDNGGGDEEWASKRPKVVGAAAEKEHILTSDASHE TNGDEAQGGDASRKENTVSTNPCVSDEKAATNSNVSSGHGVILTSVEADAAEDKGCRH TMEDAWVLLPDASMESPGNLRCAHFAIYDGHGGRLAAEYAQKHLHQNVIAAGLPRELM DVKAAKKAIIEGFRRTDECLLQESTKGNWQDGATAVCVWVLGQTVVVANAGDAKAVLA RSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGGSVGPNGRLQGRIEVS RALGDRQFKKVGLIATPDVHSFEVTRKDHFIILGCDGLWGVFGPGDAVEFVQNQLKET SSATLAVRRLVKEAVRERRCKDNCTAVLIVFKH</aaseq>

Gene Sequence

<dnaseqindica>5916..6023#5531..5578#5332..5421#4734..4817#4016..4177#3515..3567#2489..2533#1420..1456#976..1084#538..905#ttcttctctctccgaccctctcgttcaccggcgacggcggcgctacgacggccggcgggctcccgtactccgcttcctcctcctcctcctcaggtttcgtggtcgtgcgctctgttcagctcctctccctttttacggtttttgccgctgcgatttctgctgcgatgagctcgctcgcccgcgctcttagagcgcgtctcgatcgcttcgatgtggtctggggacaaaggagtgatgctgggaacgaagggttcgggtggtggggatgtgggagaatggctactagtgctaggttttggggggtcgatttggaagggtttggttcatgggagattggggaagaggggtggggatctggtagatgcagatgatgaagaggggctcatattttgatttagcttttagcaaatatataaagtatatagcgaaatgcactcacatttcattcatttccttctgtttgtttgtgcatttcagtgcgctggtgaaattgataagaggctgttggaacttggaagctgtatagttcaggtcgtcatggctcatcaaaagcgtgaagcaaccagcgacaacggcggtggcgatgaagagtgggcatcaaaacgccccaaagttgtcggcgctgctgctgaaaaggagcacattctgacatctgacgcttcgcatgaaacgaatggcgatgaagctcaaggaggagatgcctctcgaaaggaaaacacggtgtcgacaaacccgtgtgtttcagatgagaaagcagcaaccaactcgaatgtttcaagtggccatggggtgattttgactagtgtggaagctgatgctgcagaagacaagggttgcaggcatactatggaagatgcatgggtgctgcttcctgatgctagcatggaatctccgggaaacctgaggtctgcctctttctgttcagtttaactcctagcatccaatacttgcagcctgatgtgtagcttgatgcaggtgcgctcatttcgcaatatatgatggacatggtggtcgcctggctgcagagtatgcacagaaacatttgcatcagaatgttattgcagcaggattaccacgtgagttggtctgtttacattatctgcttcctttcaatgttttcactattcatgttctatctgaacttctgttttcctcactgagtgatagtttagtgttagcaaaattgcgcattcattgtttctctatttttcttttttttatcatatgggagtattccatcattagatttatgttttatttcctcttatgctaccttccattaatgagtcatttcagttaggtccgtcacttgatttatttcaatggtatctctagattaatcccttttttgcttgaatgcaatgcacacagtaatttggtttgtgagttacctaatagtaattaaaaatggatttacagatggatgttaaagctgcaaagaaggccatcattgaaggtatttattacatgaatcttagttacttgctgataactgtagactaggattacacttgttgatttttgatggctaagattattcccctggtcagctaaactgtcctatgtactgtacatagacacattgaccttgattccattagcatcccatatactccctctattcaagtttgtctgtcatattttggcctgacacaaagaccaaggacagcaaacatgcttatcatcttcctaatctactcccaggccaatgggtcagcatgcctattgtaacagcccatgcatgcatgatgatcgcagcggaaccaatgatctgtagccaattgtaaatgcgattaatttcacatgcatgcaacgggcagtgctcctgaggcgtccatgcagtggctgattaatttcacgtgcgaactgaaacggccagcacgtcggacgagatgcaactgcatgccaactgcaaatgtgacgatcaaacttgaaaatcagttttttttttaaaaaaaatgatgatcaaacttgaatggagggagtactttatgatgatgagtccaggtgcaatcctttagttttaatttcactgtctggtttggtagaagaaatatattgtttatggaaaacgacaacaggcattgccatcttacgtgtagttccagtgctaagaggaacacaatttcaattccaagctttctctgtttattattgtttttccttcatattagcatattccctgtaagaaaatgatgtgctacaaaaaaaattcttacaaactttttaccagtactgaaatggtacactttcgcatcttttattttccatcaaccaacttattaaatcaaacagttggcattttaaaagaatcttacgtatagcactactcttctctgtacttactatatctatctctccacacatttgatgtttcaagctctttaatttccgttcagtaagtatttattttccatcggtaattagtacattactgatacaccaactgattttatgctctggtacttactttgttggatcttttcaggttttcgtagaactgatgagtgcttactgcaagaaagtactaaaggtacgaggatatattcatatctaggcagaaaccatggaataaaattttaaaaatatttgaaaaatatcacatatggctaaggtgatattagacaatcatacaaaatatcaagatgaaactcctctccatctatgagataggaaatcgagaaacagtgaaaaacaaaataacaaaaaaacaggtatagtgtttcttcattgccattgttaattttatatctcacaaacgaagtctgaatttgttgttaaaaattttgtatggttgtctaattacatcttccctacatttgtgattttccttatatattttctgaacttccatgcaaaagtttccagctaagttgtaggttccactacatattttcccatatctccattactcttctgcaatatccaattcgtgtggaaaagttggcctgcacatttaccatagacctctgctttacagtcacctctgacccaatatagtgtttatggcccagataagaataatatctggccattctactatattggctgaaaattgttattgcaaatctacttaatgttctgcattgttatcagttacctgaccataaatagccttctttggtggttaaaatttgtagctagtggttcgtagtgtatagtttagctgatgctgtcaacaaaatgcatataatgagataattattttggtgagcagcagagctaattagagatactaaaggtctgctcaaattgtctccttttccttctgcttggacaaggagagatatttattatttaatcagattggatttcattcgactttcctatttcacaacaataaaaggaatacatttctgttttggtgacaactaataataaacattgtattgtgcccagcattgaggtagattttgaaactctattatgtaaattttgttagtttcatttttgtttcatatgattttttactctatactactgaatttctacctatttccttattatactataggaaactggcaagatggtgcaacagctgtctgtgtctgggtcctggggcagacggttagttttcagtaacaagggaattttgtgtactcataatattttcacattattatatttttggattttgactttgggagtatcgatagtgacaagatttaagaggtgatagaaatgtgttggtgcttactttcagccctcttagttagaggttctcgatggttcatgagggcccatattttatatcgtgatcatctgcatgtcatttcttgctgagttgtttaaatcatgtggtttactgtacgtaggtccaatctactttttatttgtataagcttaaatcatgtggtttactattttgtttctttcaatgctatgtgctttggtttcagctctgtgctctatagttttaaattttgaactactggatcacaactgttctattgtttatgtagtgaaatatattgtcgattatgtgattgttgtttattttatttttgaaaaaaaggtggttgttgcaaatgctggagatgctaaagctgtattagctcgttccacatcagctgatggtgaaggtgcagtggatgatgccaaaagtcaactgaaggctattgttttgaccagagaacataaagcaatctttccacaagaacgtgctcgaatccaaaaggtaacttgttgctttactttcaacatttatttcagttttcctgccaaatttcatctcagtttcgttttgaaagtttaaaatgtatattctgttttgtgcactgttatttaatataatgaagtcctttcttgctctagattttccaatgtaatcatgctgcatgcaccgtaacctgttaaacctaatctgattatgctacacaactgcaaatatgaatgtagctctgcgttgttaatatccgttttcattatgggttattccttgaacaacttaatgcatttgtgcttcaatcatatgccggtgattaccctacttttatgtggtttcagttagcttgtttatattatgagtatgttatcatttcttgatttattgctttgcaaaaggtttcagatccttttttgatttgcttcatgtcgtttatttagtttagtcccttgtggttttgatgaattggcaattactatatgagcttgttagttctatcattatattttgattttgattttgatttgtgttgactcttgattcattttaacatgttttccctacaaaggctggaggatctgttggccctaatggcagattacaaggtcgcattgaagtatctagagctttgggtgatcgtcagtttaagaaggtttgctgttgcagatacatttctcataagcagttgtgcacatttccacattgctttttgaaccaactatgaagtgtcagatttctggctatatgctagcactgttgtttcagctaacgttcgaccctattaactgctggggatttaagttgtaaacagacgttgtggaagcttgctagcatgttttaggtctttgcgaggctgcaagccttcacaaaattatgatactagtatatttccctgtttctctgttcatctctttgtctggataattggataaactaacagtggctttctcgatatggcaaacctaacaatgtgccatttgcatatattgaattatagtagtgtatgaattctgttgggcaactggccatgcctggtcttgtgaagttctttcaaagataaaatgtgaaatcctatgttcttttgacatgcttttggaaagcctgctttagccataggaaattgctacatttttatattacgatctcttatgtgccccactctgcaggttgggctgattgctacaccagacgtccactcctttgaagtaacgagaaaagatcattttattattcttgggtgtgatggcttatggggagtacgtcctttttctcttctcccctttatcgccaatcgttcttgtggtctgcttcagtaatatactttttccgtgttgttttaacatgtgctgtaaatggatgtgccaggtatttggaccaggtgatgctgttgaatttgtgcagaatcaattgaaggtgctgtttgtttctgttatttgcatctccaagtgcattcgtttcctttccccactactccatctaacagcaattatctaccgtagtgaaagcatttatgatcagattacgctggcacacaaaatctaaagccatgtgacccgattatgattgaatttaatacgatcaattccgcaaagcattactctctctgttccaaaatatagcaacctaggatcggagaaaacatatcctagggggcctatttattttaagttgctatattttgggatggatgaagtatatgaacaccaaatttctcaaccctaaaactttgttcaaccgtcaatcattgcaggagacctcgtcagcgactctggcagtgcggcggctcgtgaaggaagctgttcgtgagaggcgttgcaaggacaactgcactgccgtgctgatcgtcttcaagcactagaattcttttcacccactgcgaccgttttcgttttttcaccaagctgaactggggaaacgaatcatctgacaacgaacaatatctagttctattgttaccttatcctgcactgcgacgttctggccgtgtctgtattgtgatcgagacccttgtgcactgctgtagccgtgtatgtattgtgatcgagacctttgtgcactgctgtagcttatgcggttatgccacctctggaatgaatgaaatattggagcccctccactccaaaatatagctttatagtacgagattagatacaacctaacaacggatttgaataggttctttgttcagattcgttgcactatggtatgactaatccagtaaattaggttgctatattttgagatttttgagatggagggagtatttttctagatattggagtaattcctggtactactagattttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0314400, RefSeq:Os09g0314400