Os11g0139500

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Gene Name

Os11g0139500

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001072237.1 GI:115484086 GeneID:4349728

Length

6904 bp

Definition

Oryza sativa Japonica Group Os11g0139500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1803244..1810147

Sequence Coding Region

1806281..1806370,1806468..1806672,1806761..1806933,1807044..1807126,1807534..1807741

Expression

GEO Profiles:Os11g0139500

Genome Context

<gbrowseImage1> name=NC_008404:1803244..1810147 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1803244..1810147 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttccccaacattcaaactagattcaaatgctcctacagtcagctgggcagatcctaagaataacgactcggtctctacttctcaggttaaatctgtatatgtgaaaaatctgcccaagaatgttactcaagcacagctgaaaagactgtttgagcaccatggagaaattgaaaaggttgttcttcctccttcaagaggaggtcatgataataggtatggttttgttcactttaaggacaggtccatggccatgagggctctgcagaacacagagagatatgagcttgatggtcaggtcctggattgctcacttgcgaaacctcctgctgctgataagaaggatgatagagtaccactacctagttcaaatggagctccattgctcccgagttatcctccacttggatatggtatcatgtcagtaccaggtgcctatggtgctgctcctgctagtactgcacagcctatgctgtatgctccaagagctcctccaggggcagcaatggttccaatgatgttaccggatggtcgtctcgtatatgttgtacaacagcctggtggacagttgccgctggcttcgccgccgccgcagcaagctggacatcgtagcggcagtggaggacgtcatggcggcagtggcagccgctatggcggtggtggtggcagctccggcagtagcaggcccggtgcaaaacggcagagaggagatgacaacagcagtagccgccacaaaggccggcgccgcccgtactga</cdnaseq>

Protein Sequence

<aaseq>MSSPTFKLDSNAPTVSWADPKNNDSVSTSQVKSVYVKNLPKNVT QAQLKRLFEHHGEIEKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQNTERYELDGQVL DCSLAKPPAADKKDDRVPLPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPASTAQPMLY APRAPPGAAMVPMMLPDGRLVYVVQQPGGQLPLASPPPQQAGHRSGSGGRHGGSGSRY GGGGGSSGSSRPGAKRQRGDDNSSSRHKGRRRPY</aaseq>

Gene Sequence

<dnaseqindica>3038..3127#3225..3429#3518..3690#3801..3883#4291..4498#attcgatcgccgtcttcttccagctcgagcctagggttggcgggtggcgaggcgactcggctgttccccatttccgccatcgggacgaccaccctgcctcagctccccaaggtgaggaaccagatcccagattcgaatttagatgccctgcgttcgtcctatccctcgctattgatcgcgctttgttgttctatttgggagcggtagcagtgtggcgctcgtcaagattttctcgtttccaaatgttggattgcgttggttatcagaattttccttcacctttgcaattgctggattggcatttaggtcgttaagtttttttttttaaatacctctattgtgctagtcgggagcgagaggacttagctatttcatcgatctggtttgtttgtgcaggcccttgtatgtagatgaccaaactgtaaccagaatttataaatgttgatttgaagacatcttgtcagtcaaatcgaggccctaagttccaaattatagctcttctagtgtgtgcgaaaaatgtaatgtcctgaaccgtgccagcgatttttctttcttaattaaaatggagccggcgtgttatcctctgtaacccatatcaaactcttttgcggtgctccacacttacctctaacctaatatagggtaaaagtaaaccaacattaaactaccctattatttaagtgattgcacctgctccagctagttatcgcgtttttccttgcttatcatgtagccaaaagcctttattacccttgcaacgaccaagggatgaccaattacatggtacggagtaatagtcatattaaccattagatagaatggatggcccaaaataagttaggcgcaccttaaaagtttccatatcttttaatatcctacaaattaagcaatggaacgtttcctgtgttgggcccaatttgatttgcttgtggtatcgaaatggtgccaattagtgttttctccatttcttgtcattagtcagattctctttttttttttttgcgggagtcattagtcagattctcagctactgtcatgttatttaaccggaattagattttaatttatagcataatacatacaatatattatggttctcatcgtgtttttttttatttctgtgccttttttctttccttcccatccatttcatggaatattggcatcattctattgcacatcatcagcttgttcattatacttcacattgcatcatctttgctctttgctctttttcatgtccatgcttatcggggattgtatcttgagaacctccccatagaatcctttgtaaccgtaccactgtttcctcatttgttccttatacattctctttctatccagttggatacccatggctgcatcctgtttgagattattgcataacaagtactcttgtttattcggttgtttttcttcctatccttgtatcatcactttgctctcccaatattgttggctcctttgctctttccaaagttgcctcggaactttgagcttttcaagatgccaaggacagataatgctgcttctgccaattcagttgaaccagacaaatcagaagaatgtttggagtttgatgatgaagaggaggaggtagaagaggaggaaattgaatatgaagaaatcgaggaggagatagaagaggaggaggaggtagaggaggatgaagatgtcgtggaggaagttgaggaggtagatgaggaggaagatgaggaggaagatgaggaatctgatgaaactgaaggtgtaagtaaaactaaaggtgttcaccagaaggatgttactgaaaagggaaagcatgctgagcttcttgctcttcctccccatggttctgaagtatatgttggaggcatctccagtgatgtatcttctgaagatctgaagagactatgtgaaccagttggagaagttgtggaagtaagtactgcttacattgttcgttttatgtttccatgtggcctgttttgttctgaattacatattctcccgttttatgcaggtaagaatgatgagaggaaaggacgatagcaggggatatgcttttgttaattttagaactaaaggtttggcattaaaggttgtcaaagaattgaacaatgcaaaactgaaggtttgttttctgttgaacttgaaagttgattatcatgccatctgatatgcaatgtctatactgtcgctccatcagtgccattgagattttatcctaagattggtaattgatcaagcaagttctggacatttttactacacttttttcagtttccaaatgtgaactggtagagaacaaaatagtgatttcacttggatattatcatgcaataagctttcctttttttttcagtcttattgcacttatatctgcagttaacttctgttgattttgacatagcacagtaatctcacacatcagctgttctccctgtttccctggatatgtaggaagaaagagggaggggcacacatatctactatacatgatctctagtaatatcatggttttgtaacttctaatatttggttaaaactactggattatgccattaacaggaagcacttgttcatgattgggagtggtggtagcttatgttctcttaccaatagttttggaaaacatagctttgctgccctggacacacatgtgcagaatatttcctggttccctgttatagctgacaactgatctatcttgatcttttataccaactgaattttttcattatgcttctcgttacagggaaagcggataagggtttcttcctcgcaggctaagaacaagctttttattggaaatgtaccccatagttggacagatgatgatttcagaaaggctgtggaggaagttggtccaggagtattaaaagctgatctcatgaaggtatgtatccgggtagttcaacaactttgttatgcactctcgatcttctttctcctaaaaatttctttgtacttgtaggtctcaagtgcaaatcgcaatcggggttatggttttgttgaatactacaaccatgcatgtgcagagtatgcaaggcaggagatgtcttccccaacattcaaactagattcaaatgctcctacagtcagctgggcagatcctaagaataacgactcggtctctacttctcaggttcgttcaagcataacatgaacaattttacttttcgtgtataattcttataccatgatgttttatatgaacttgattattttacgtgtgttttcaggttaaatctgtatatgtgaaaaatctgcccaagaatgttactcaagcacagctgaaaagactgtttgagcaccatggagaaattgaaaaggttgttcttcctccttcaagaggaggtcatgataataggtatggttttgttcactttaaggacaggtccatggccatgagggctctgcagaacacagagagatatgagcttgatggtgagctttcctcttgccctgtaatgacccactatgcttagtctggtttgtctggtgcattcaaggtctcacatatttctcttaacaggtcaggtcctggattgctcacttgcgaaacctcctgctgctgataagaaggatgatagagtaccactacctagttcaaatggagctccattgctcccgagttatcctccacttggatatggtatcatgtcagtaccaggtgcctatggtgctgctcctgctagtactgcacaggtacatgagtacatcatcatcatagacccctatgtccgatcaatgaggaaatacatgtagaaaaggatgattgatgcccttctaaccattgtatgctctgctttttgcagcctatgctgtatgctccaagagctcctccaggggcagcaatggttccaatgatgttaccggatggtcgtctcgtatatgttgtgtaagcgctaccaaccatcttttctaaagaaaagctaataacatgttactccctccatccacaaaagttacacatattacttttgacaccaagaccaaagagaaattaaatcatcttggatgttacaaaatcaaggagtgaatgcaagcatgcaaccaatgagtatttagatgactccttgggttctaataaaacatttaatttatctattcatttaagttttgaatgcataaagactacaaataggaacaacttatttggaaaaactcaaatgtgaaataggtgtaacttttgtggattgaaggagtatcacttatcagcatgagatgagatgaagtgacttctgttcagttacacgtcattttggcatttccattgctgatgatatcttcattgcttctttgcagacaacagcctggtggacagttgccgctggcttcgccgccgccgcagcaagctggacatcgtagcggcagtggaggacgtcatggcggcagtggcagccgctatggcggtggtggtggcagctccggcagtagcaggcccggtgcaaaacggcagagaggagatgacaacagcagtagccgccacaaaggccggcgccgcccgtactgatctgatcagcatagctgtagctaccacttagaagatgtagtgccgtcgcagaaaattaccagaaaatctggtagaaataatttatactgtttgtactcatcgatttattagaagaattcgtttctgaaacaagactgtacatgcgtatttaccagtattttccaatatcgcagattgctgaatctgaagaggcactggtacagtataagccagtttcaggtctatttgtaagcttgttttacattatctttcgcttttgcagtaccgtcaattcacctctgtaagccacatggagtatgagatttctgggcaagaatctgaggtagacagtgaggtgtggcttggctgggtggcgcagcgacgtgtgtgctcaagactggagacacggttgccgctgcccaagctgaacacgtcgtgttgccttgtgactctctcgagaggcggacgggtacatgccgcgacgccaaccatttctaggcttctaatctaagccgcggccgccgcctccgacctgtgctgcttctcgacgagccgccgcctccggggaacctcgtacagggcggcgccgggccaccgctccagattccggtcgaccgcgagtccacgaagcatcggacgcacggcgacgacactgcaatccggcgttcctgggtcctggcagcaggtgaaaggtgcgtgctttctccgcctgagaatgattggttagttccctttgcgattaaattgccaattctttttctaatttgtgcatcaaaatttccggccatatggtgattgtacatgttgtattggacttctaggcgccggatttgccaacttctaaatttctgatgctttcgcgcatgacaaaaatgacagatcatatttatccatgtacttcattctaataaaataactcctagttaattatctttaggttgctcatagggtcatagttactcaggattgggctatccggctatgctgtaccgttctatattcattgatattttgcctgcccaatattgtacgcgaagtgctacagttaacatgatcatcaatgatgctaggtgtctgatttccatgaaacatgttaggttcatgatgctgatctttatttatatacgaactgttatgtatgctttatctggtcaagtcatgcttgatagttgatacatccttttgttctgaagaattctagtacaaatttaggtttttgaagaacagggcaatgtcaaaaggttgcaattgttaggttagcttcaaatatacatttgctgatttgcagcataaactgccatgtctctgtccagtagttatgccaatgtttaacctagattatttcatttacttgaggaaacattttttttttggaatttagttctctattctttgaacagtccaacctggtaatgttatctgattctgtgaattttctgaactttatcaggtcctatttggtgtaagaatttatatacctgaccaatcatttagtcatctgcatcttctaagttgttgaaaaaatatggatgacggggagatagaactttccagccaaatgatgtttccaaatccagagactccaaccagccttgatgatttcctgccaagcatcaggacaacacgcacacacactcatacttgcaacccgcctggtccatcggcaacagcgcacacgcatacatgctaccacacccacacccatgtcttcagctcagatgatgatagttgtggaggtgacaaagccaagccaaagaagggccgcaagccattgggcaaccgtgaggctgtccgcaaataccggcagaagaagaaggctcatacagcacacttggaagaggaagtgaagaggcttcgtgccattaaccagcagctggtgaagaggctgcaagggcaggctgcacttgaggcggaggtggtatggttgaggtcgttactggtggatgtgcgatcaaggatcaatggtgcattgggtagttacccgttccaagcacaatgtggagttaataatgttttgggttgtgatggaatggctcagtgctttgctggaaagccggagttgggtgagagacggatttgtacaccttctgtaatgaattgccatatcagcccggattcctagcgatgttatcggaagcttcatggtctcatctacctcaaaggatgagtagatattgtttattttgtttctagcctttttatcagaagataagacagtagtattacagtgccgtggagcctggagggttgatgcgttgtttcttaggtggcattttacccctggaatctagtggaagttagtaattagttttcaggttcgttatcaaatacaaatttttggtttctagtgtaaaatatctttggtttctatgcagtgtaaaatacacatttcccccctattttccagagataatgttcagttttagg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0139500, RefSeq:Os11g0139500