BGIOSGA027350

From RiceWiki
Revision as of 07:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027350| Description = BGIOSGA027350| Definition = Oryza sativa Indica Group BGIOSGA027350, complete gene.| tag = | tid = BGIOSGA027350-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027350

Description

BGIOSGA027350

Definition

Oryza sativa Indica Group BGIOSGA027350, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA027350-TA

Ensembl Protein ID

BGIOSGA027350-PA

Length

1138

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10480065..10481202

Sequence Coding Region

10481023..10481202,10480065..10480862

Genome Context

<gbrowseImage1> name=IndicaChromosome08:10480065..10481202 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:10480065..10481202 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGATTGGATGAAAGATCATCAAATACCTGATGAGTTGCGATACCGCATCAGTCAATTCTTCAAATACAAGTGGATTGCTACGCAGGGAGTTGAAGAGGATTCAATCTTGAGACAACTACCAGCAGATCTTCATCGAGATATAAAACGGTACCTGTGCCTTGATCTTGTCGAACGTGTGCCATTTTTTTCTGCAATGGATCATCAACTACTCGATGCCATCTGTGAACGCATGACCTACTTCCTTCGCACTGAAGGCACCTACATAACCCGTGAGGGAGACCCTGTCAAGGTGATGCTCTTCATTATTCGTGGCAAGCTAGAGAGCTCCACAACAGATTGTGGCAGAACTGGCTTCTTCAACTCCATCATCCTAAAACCAGGCGATTTTTGTGGTGAGGAGTTGCTTACATGGGCATTGCTTCCTAGCTCTAGAGACAGCTATCCATCATCAACAAGAACTGTTAAAACATTTACCGAATTGGAAGCGTTCTCCCTCCAAGCCGATGACATTAAGTGCGTAGCCAGCACATTCAGGATGATGCATTCCAAGCACCTGCAGCACACATTCAGGTTACACTCATACCAGTGGAGAACATGGGCCGCTCGCTTTATCCAATCAGCATGGCGAAGGCGCCGGAATCGCCAAAAAATGGCAGAAGTAGGTCTAAGCAACAGGTGGAAGTCATTCTTCTCGTTGGTCAATGACTTCAATGAGATGAGAAGTGAGGATGTTAATGGTTCTTCCAGCACTGTATCACACAGAGAAACAGTTACTGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGATAGGCGTGTGGCAATATTCGTCGTCAAATGTTATCTTGATGATTCGGATTTATGATTCATTGGTTCATGCTATTATTAAAAACTACTACTTTCGTTTTAGGTTATACATTGTGCACGTTCATATCTATAGATGTTAA</cdnaseq>

Protein Sequence

<aaseq>MEDWMKDHQIPDELRYRISQFFKYKWIATQGVEEDSILRQLPADLHRDIKRYLCLDLVERVPFFSAMDHQLLDAICERMTYFLRTEGTYITREGDPVKVMLFIIRGKLESSTTDCGRTGFFNSIILKPGDFCGEELLTWALLPSSRDSYPSSTRTVKTFTELEAFSLQADDIKCVASTFRMMHSKHLQHTFRLHSYQWRTWAARFIQSAWRRRRNRQKMAEVGLSNRWKSFFSLVNDFNEMRSEDVNGSSSTVSHRETVTVSXXXXXXXXXXXXXXXXXEIGVWQYSSSNVILMIRIYDSLVHAIIKNYYFRFRLYIVHVHIYRC</aaseq>

Gene Sequence

<dnaseqindica>1..180#341..1138#ATGGAGGATTGGATGAAAGATCATCAAATACCTGATGAGTTGCGATACCGCATCAGTCAATTCTTCAAATACAAGTGGATTGCTACGCAGGGAGTTGAAGAGGATTCAATCTTGAGACAACTACCAGCAGATCTTCATCGAGATATAAAACGGTACCTGTGCCTTGATCTTGTCGAACGTGTACGTGAGTCCTGTTCCTTCAAATATCTTCTGCAATCACAAGCATCACATGTACTCATCCTTACTATTCATGTTTAAGGAGAAAAAGGAACAAAAACTAATGATAGACAGTCTAAAATAATGACGAGCTAAAGTATGCTCCCTTCAATTGAAATTTCAGGTGCCATTTTTTTCTGCAATGGATCATCAACTACTCGATGCCATCTGTGAACGCATGACCTACTTCCTTCGCACTGAAGGCACCTACATAACCCGTGAGGGAGACCCTGTCAAGGTGATGCTCTTCATTATTCGTGGCAAGCTAGAGAGCTCCACAACAGATTGTGGCAGAACTGGCTTCTTCAACTCCATCATCCTAAAACCAGGCGATTTTTGTGGTGAGGAGTTGCTTACATGGGCATTGCTTCCTAGCTCTAGAGACAGCTATCCATCATCAACAAGAACTGTTAAAACATTTACCGAATTGGAAGCGTTCTCCCTCCAAGCCGATGACATTAAGTGCGTAGCCAGCACATTCAGGATGATGCATTCCAAGCACCTGCAGCACACATTCAGGTTACACTCATACCAGTGGAGAACATGGGCCGCTCGCTTTATCCAATCAGCATGGCGAAGGCGCCGGAATCGCCAAAAAATGGCAGAAGTAGGTCTAAGCAACAGGTGGAAGTCATTCTTCTCGTTGGTCAATGACTTCAATGAGATGAGAAGTGAGGATGTTAATGGTTCTTCCAGCACTGTATCACACAGAGAAACAGTTACTGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGATAGGCGTGTGGCAATATTCGTCGTCAAATGTTATCTTGATGATTCGGATTTATGATTCATTGGTTCATGCTATTATTAAAAACTACTACTTTCGTTTTAGGTTATACATTGTGCACGTTCATATCTATAGATGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027350