BGIOSGA027353

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Revision as of 07:41, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027353| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027353, complete gene.| tag = OJ1371_...")
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Gene Name

BGIOSGA027353

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027353, complete gene.

LocusTag

OJ1371_D04.6

Ensembl Transcript ID

BGIOSGA027353-TA

Ensembl Protein ID

BGIOSGA027353-PA

Length

3256

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10257403..10260658

Sequence Coding Region

10260188..10260658,10259949..10260068,10257802..10258045,10257403..10257689

Genome Context

<gbrowseImage1> name=IndicaChromosome08:10257403..10260658 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:10257403..10260658 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCACCGCCTCCTCCTCCTCGGCCTCCTCCTCCTCTCCCCGGCGGTGGCCGCCGCCTCAGTCCCCGGCGAGGAGGAGCCGCTGATCCGGCAGGTGGTCGGCGGCGGCGACGACAACGAGCTGGAGCTGAACGCGGAGCGCCACTTCGCCAGCTTCGTCCAGAGGTTCGGGAAGTCCTACCGTGACGCCGACGAGCACGCGTACCGGCTCTCCGTGTTCAAGGCCAACCTCCGCCGCGCGCGCCGCCACCAGCTGCTCGACCCCTCCGCGGAGCACGGCGTCACCAAGTTCTCCGACCTCACCCCGGCCGAGTTCCGCCGGGCCTACCTCGGCCTCCGCACGTCGCGCCGCGCCTTCCTGCGGGGGCTCGGCGGGTCCGCCCACGAGGCGCCCGTCCTCCCCACCGACGGCCTCCCCGACGACTTCGACTGGAGAGACCACGGCGCCGTCGGCCCCGTCAAGAACCAGGGATCGTGCGGGTCGTGCTGGTCGTTCAGCGCGTCGGGGGCGCTAGAGGGAGCGAACTACCTGGCGACGGGCAAGATGGACGTGCTCTCCGAGCAGCAGATGGTCGATTGCGACCATGAGTGTGATTCATCAGAACCTGATTCATGTGATGCTGGATGCAATGGTGGATTGATGACTAACGCCTTCAGCTATCTTTTGAAATCCGGTGGCCTTGAGAGTGAGAAGGATTACCCCTACACTGGGAGGGATGGCACCTGCAAATTTGACAAGTCGAAGATTGTTACTTCAGTTCAGAACTTCAGTGTTGTCTCTGTCGATGAGGATCAGATTGCTGCCAACCTTGTCAAACATGGGCCACTTGCAATTGGCATCAATGCTGCGTACATGCAAACATACATTGGTGGTGTTTCGTGCCCGTACATCTGTGGCAGGCACCTTGATCACGGTGTTCTTCTCGTTGGCTACGGCGCATCTGGTTTTGCTCCAATCCGCCTAAAGGATAAGGCCTACTGGATCATCAAGAACTCCTGGGGCGAGAACTGGGGAGAGCATGGGTACTACAAGATCTGCAGGGGCTCCAACGTCCGCAACAAATGTGGCGTGGATTCGATGGTCTCCACCGTGTCTGCCATCCACACCTCAAAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDHRLLLLGLLLLSPAVAAASVPGEEEPLIRQVVGGGDDNELELNAERHFASFVQRFGKSYRDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRAYLGLRTSRRAFLRGLGGSAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLATGKMDVLSEQQMVDCDHECDSSEPDSCDAGCNGGLMTNAFSYLLKSGGLESEKDYPYTGRDGTCKFDKSKIVTSVQNFSVVSVDEDQIAANLVKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKAYWIIKNSWGENWGEHGYYKICRGSNVRNKCGVDSMVSTVSAIHTSKE</aaseq>

Gene Sequence

<dnaseqindica>1..471#591..710#2614..2857#2970..3256#ATGGATCACCGCCTCCTCCTCCTCGGCCTCCTCCTCCTCTCCCCGGCGGTGGCCGCCGCCTCAGTCCCCGGCGAGGAGGAGCCGCTGATCCGGCAGGTGGTCGGCGGCGGCGACGACAACGAGCTGGAGCTGAACGCGGAGCGCCACTTCGCCAGCTTCGTCCAGAGGTTCGGGAAGTCCTACCGTGACGCCGACGAGCACGCGTACCGGCTCTCCGTGTTCAAGGCCAACCTCCGCCGCGCGCGCCGCCACCAGCTGCTCGACCCCTCCGCGGAGCACGGCGTCACCAAGTTCTCCGACCTCACCCCGGCCGAGTTCCGCCGGGCCTACCTCGGCCTCCGCACGTCGCGCCGCGCCTTCCTGCGGGGGCTCGGCGGGTCCGCCCACGAGGCGCCCGTCCTCCCCACCGACGGCCTCCCCGACGACTTCGACTGGAGAGACCACGGCGCCGTCGGCCCCGTCAAGAACCAGGTTCCCCTCTCGTCTCCCGTCGATTTTTCCCCCAAACCAAGGACTCCTCCTTTGATTTCTCGATTGAATCAGCCGTCTTATCGTTTCTTGATTTTTTTTTAATTTTTTTGCTTTTGCAGGGATCGTGCGGGTCGTGCTGGTCGTTCAGCGCGTCGGGGGCGCTAGAGGGAGCGAACTACCTGGCGACGGGCAAGATGGACGTGCTCTCCGAGCAGCAGATGGTCGATTGCGACCATGAGGTGAGAGGCGTTTGCTTCCCCTTTCTTGTTTTTGCGTACTGGTATATTATTATCCTTTTATTAGGAGCAAGTTTTATTTGTAATTTTGTGATTGGTCTGTGCTTCTATGGGTGTTATAAGAGAGGTTGGATGGGTGCTATAAGAGAGGTTGGATTTTTCTGGCTTTCCGCCAATGTTTTGTCAGCTGCTGCGCTGTCCTTTTCCTATCTATTTTCTTGGTTTGTGATTGGGCAGCGCACCCAAATGAGAAGGGGAAAGGGAAATTGGGGCAAATGAATGGGAAAGGGAAATTTGGGAAAGGAGTTGCATGATTCCTTGGCTAATTTTGAAAGGGAAATTATGAGGAAAAAAGAGTGGCTTGTGGTATTATCAGTGCTTAAGAAGTCAAACCAAAGTGGTGAACTTAGCAAGCAAATTTGTCGTGGTCGATTTTATAGTGGTGAAGTAGGTGAATAAAACAAAAGATGATGAATGCAAGGCTGAGTGGATAAAATCTCCAATTGATACTGGCACATGTCGCTCTGGAAGATCGGTCTAGGTAGGCGTCTCTCTGGGTCTACCGCAGGTGGATAAAACTAAGATGAGATCTAGGTAAGCGTCTCTCTGGGAGTTCATGGTGACCTTGTGCATTGATAGGTCTATGAAATAAGAGAGTTCATGCACCCTTGTGTGTTGGTACGTGCCTATGGTATGGTAACGAACAAGCGTATACAATTGGGCACAAAGGGTTGTTTGAGTGGGCACTTAATGAACTGAAAAGTGCTGAACTTGGGAACCCTATGATTAGTTAAATTTTAGAGAAAGGGAGTTAAGAAAGTACCCGATGTTCTGGGGTTGTCATGTATTCCAGCAATTTTAGTTTTTAGGTACTAGTGAAGCTACCATGAGGAAGTTGTAAATTACTCAAATCTCAACCATTAAGTTCACTTGAGTGAAAAATATAAATGGAGTTGATATCGGCCACAGGTTGTTTCTGTCATTGCTTCATCTTATTTTACTGTCTCACCTGATGGATAGACAGCCAAACGTTTGTGTGCACTGGCTTGATGTACTCTTTCGTTTTGGTAACTGGGCCCCAGGTGAGACCCCATCTTGGTGATATTGTTGTACAACTGAATAACTACTGTACCTTTTATATCATTATATCGATTAAGAAAAAAATAATCAAATTTCCTCTTTTCTTTTGGATGTGTCATCATATTTTAGGGGCAAATTTCCGGTTTCCTCTTTCATTTGGTTGTGTCCATCATATTTTAGGGGCTTGCTCTTGACCTATTTCTTTCCATATTTACTTCTTGAAGCTTCACTCCTAAATCCTAATTAATGAAAAAGTTAGTGCTTCTCTGTTCTGTTCAAAAATAAAACAAATCTTATTTCCATAATAACACAATTCACTAAACCATCCTTACAAAGTCTGCACCACCGTTTTAATTTCCGCCTATAGCATGGGTGATTCTCTTCCTAGTTGAAAATTCTATGTAGGATTTTTTGGTATTAAGATGTAAGTGGCTCTCATTCTAGAAGGCTTTTCATTACTAAACTTCTACATTAGGAAATGCGAGAAATATTTGTTCAGAAAAAACAATTTTCTCATATATTTAAAAGATAATCAACAGTGATTCCTATGGTAATTTTACAAAGTAGCACCAGGCTAATGTCTTGTACAACCTCTACAATTTGTCGTAACCAGCTTAAGTGATTTTCACATTGCTTTCATCGCAAAGTACACATGTAAAGCTTACCTGAGTCGTGCTCAAATAATTTTTAGCCTTCCTGGTATTATAATACTTTTTTTGACTTGACAGTGGGATATGTACTGTTGTTATTTGTTTTCTACTGTTACCTGTTTCAACTGAATGGGGTATCTCAACTTACTGGGCTTCATTGTTATCTAATTTTGCAGTGTGATTCATCAGAACCTGATTCATGTGATGCTGGATGCAATGGTGGATTGATGACTAACGCCTTCAGCTATCTTTTGAAATCCGGTGGCCTTGAGAGTGAGAAGGATTACCCCTACACTGGGAGGGATGGCACCTGCAAATTTGACAAGTCGAAGATTGTTACTTCAGTTCAGAACTTCAGTGTTGTCTCTGTCGATGAGGATCAGATTGCTGCCAACCTTGTCAAACATGGGCCACTTGCAAGTAAGTACTATAACCATCTCTCGGAACGATGCATTTGCAGGTCTGACTGTTATATGTAAATACATGAATATATTGTGCAATTGCTGATGAATGACTTCACATTTTCCTGCAGTTGGCATCAATGCTGCGTACATGCAAACATACATTGGTGGTGTTTCGTGCCCGTACATCTGTGGCAGGCACCTTGATCACGGTGTTCTTCTCGTTGGCTACGGCGCATCTGGTTTTGCTCCAATCCGCCTAAAGGATAAGGCCTACTGGATCATCAAGAACTCCTGGGGCGAGAACTGGGGAGAGCATGGGTACTACAAGATCTGCAGGGGCTCCAACGTCCGCAACAAATGTGGCGTGGATTCGATGGTCTCCACCGTGTCTGCCATCCACACCTCAAAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027353