BGIOSGA027381

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Revision as of 07:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027381| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027381, complete gene.| tag = OsI_284...")
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Gene Name

BGIOSGA027381

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027381, complete gene.

LocusTag

OsI_28400

Ensembl Transcript ID

BGIOSGA027381-TA

Ensembl Protein ID

BGIOSGA027381-PA

Length

2712

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9522153..9524864

Sequence Coding Region

9524645..9524864,9524120..9524226),complement(9523813..9524000,9523558..9523722),complement(9523247..9523458
,9522874..9523001),complement(9522153..9522782

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9522153..9524864 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9522153..9524864 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGGGCATCGGCGACTCCGGCGGTGGCGCGAGAGGGTGTATGGCGGCCTCCTCCTCCTCCTCCCTTCCTGGTGGCTTCCCCCAACTTCTCCGGCGGCGCGGTGGGGCGGCTCGCCGGCGACCCTTCCCGGCGGCGCGAATGGTGGCGCAGCGCCTCCCCTTCTGCCGCGGCGGCGGCAAGGCGTCCTCGCCGGTGGCGCACGTGGCTGATTTCCTTGAGGATGTTTTCCAAGAAGTGAAGCCAATTCTCAGATCTGCACTTGATGGGCACAATGTCTGTATTCTTGCTTATGGTCAAACTGGGACAGGAAAGACCTATACAATGGAAGGAAATAATGGTAAGCTCGGTATCGTCCCCCGAGCGATTCAAGAACTGTTTTCTCATGCTTCTCAAGATAGTTCATCCACATATTCCTTCTCCATAAGCATGCTTGAGGTCTACATGGGGACTGTCAGGGACTTATTGACACCAAGGCAGCCTCTCTTCAGGTCCACAGAGTGCAACACGTCGTCAATCATCAGCATACTAGCAACTAAAAGTGGAGCTGTAGAAGTTGAGGGTCTAACAGATGTTGCAATTCAAGACCTCAAGAAGGCCAACCAGTGGTACTGCAGAGGACGGCGTGCACGGTCGACGTCTTGGACAAATGTTAACGATGTTTCGAGTCGATCGCACTGCTTGACAAGAATTACCATAAAGAGAAGTAGTGGAGGTACCACTGAAGAATGCAGCAAGCTATGGCTTGTCGATCTTGGTGGAAGCGAGCGGCTGCTGAAGACCGGTGCATCTGGGTTGACAATGGATGAGGGTAAGGCCATAAACCTCTCTCTGTCAGCCCTTGGTGATGTCATCGCGGCACTTAGGCGAAAGAGAAGCCAGTTCCTTACAGGTGATGGGTCAAAGGTTCTGATGGTAGTACATATCAGCCCTTCTGATGATGATATTGGTGAAACAGTCTGTTCACTGAGCTTTGCGAAAAGAGCCCGGTCAATCGAGTCCAGCAAAGAACTTTCAGAAGACATAAAGAAGCTGAAGCAGAAGCGGATCGCAGAGCTTGACAAGGAAATATGCGACTCCGAGCAAGAGCTCAAGGATCTCAATGAACAGATAAAGAGAGCTGAAACCTCACTTGAAGAGAGGAAGAAGCTCTCTTCATCTGTCTGTCAGGCTCTCAGTGATGAGAAGGGGTCACCGAGAAGCACTCTAGTGGTAGTAGGCCACACTGATTCTGCAGAGAGCCCTCAAGCAACTGAGAAAACAAAGAGCAGAGCATCTCATGGATCAGTTCCTCACTTCATGTCCCCAACAGTTTGCAGCAGGCAAAGACATAGTTCAGCAAGCCACTCTGCTACTAAAACAAGGCTGACAAAATCAGTGAACAGGTATCCTGCAGCTGAGCTCAGTGGGAGCCATTCCTTCAGCTACTCAAGCTGCAAGAATGCAGCCAAGGCTAGGTCAGTGGCATTCTCATCCAGCATGCCCAAGATGAAATGTTTGCCACTCAAGTCTGATCAGATCAACATGAGCAACAACAGCATCGATTCGACGGCGGCGTCAGCGCCTCGAAGGAGGGAGAGCTTCATTTCTAGACCAGCTCAGAGAGCTCCCTTGCATCAGCACAGGAGAAGGATGTCTAGCCTGACATAA</cdnaseq>

Protein Sequence

<aaseq>MRGIGDSGGGARGCMAASSSSSLPGGFPQLLRRRGGAARRRPFPAARMVAQRLPFCRGGGKASSPVAHVADFLEDVFQEVKPILRSALDGHNVCILAYGQTGTGKTYTMEGNNGKLGIVPRAIQELFSHASQDSSSTYSFSISMLEVYMGTVRDLLTPRQPLFRSTECNTSSIISILATKSGAVEVEGLTDVAIQDLKKANQWYCRGRRARSTSWTNVNDVSSRSHCLTRITIKRSSGGTTEECSKLWLVDLGGSERLLKTGASGLTMDEGKAINLSLSALGDVIAALRRKRSQFLTGDGSKVLMVVHISPSDDDIGETVCSLSFAKRARSIESSKELSEDIKKLKQKRIAELDKEICDSEQELKDLNEQIKRAETSLEERKKLSSSVCQALSDEKGSPRSTLVVVGHTDSAESPQATEKTKSRASHGSVPHFMSPTVCSRQRHSSASHSATKTRLTKSVNRYPAAELSGSHSFSYSSCKNAAKARSVAFSSSMPKMKCLPLKSDQINMSNNSIDSTAASAPRRRESFISRPAQRAPLHQHRRRMSSLT</aaseq>

Gene Sequence

<dnaseqindica>1..220#639..745#865..1052#1143..1307#1407..1618#1864..1991#2083..2712#ATGCGGGGCATCGGCGACTCCGGCGGTGGCGCGAGAGGGTGTATGGCGGCCTCCTCCTCCTCCTCCCTTCCTGGTGGCTTCCCCCAACTTCTCCGGCGGCGCGGTGGGGCGGCTCGCCGGCGACCCTTCCCGGCGGCGCGAATGGTGGCGCAGCGCCTCCCCTTCTGCCGCGGCGGCGGCAAGGCGTCCTCGCCGGTGGCGCACGTGGCTGATTTCCTTGGTTAGGCTCTTCCCCCTCGAATCTGAGCGTAATTTCTCTCTCTCTTTTTTTTTTTTATGGTTCAACTTCAAATTTAGTTCGAAATCTGATAGCTTAAACCCTGCGCGAAACACAATCAGAGCCCAATTTATTTGAAGCACACATTGGCTAACAAATTAACGAGAGCGAAATGCTGCTCGCACGCTTATTAGAGAATGAAGCCACACACTGATGGTTCGACAGAGATGAATTACATACATATATGCACAAATCACGCACACTGATTAGTGATTACCTCAAGCTGTGGCAGGCACACCCTTGAGATGGTTAATTTCAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTCTTCTTCTGAGAGTGTAACTCGTTTCACTTCTGTTCATAATTCAGAGGATGTTTTCCAAGAAGTGAAGCCAATTCTCAGATCTGCACTTGATGGGCACAATGTCTGTATTCTTGCTTATGGTCAAACTGGGACAGGAAAGACCTATACAATGGTAGGCTGGTGCAGTTCTGGTTACATTTGATATAAATTCATCAGAAATTAAATCTATATTAGTTTTTAGAAAGGAAATTAAATCTGTGCTTCATCTTACTTACTGGGAACTTCTTGCAGGAAGGAAATAATGGTAAGCTCGGTATCGTCCCCCGAGCGATTCAAGAACTGTTTTCTCATGCTTCTCAAGATAGTTCATCCACATATTCCTTCTCCATAAGCATGCTTGAGGTCTACATGGGGACTGTCAGGGACTTATTGACACCAAGGCAGCCTCTCTTCAGGTCCACAGAGTGCAACACGTCGTCGTAAGATAGCAAATTCACCTGTAAATTACTAATCAATACAATCGATTCTTGAACTGAAAATGAATTCATGTTTTTACTGTGTATTTTCAGAATCATCAGCATACTAGCAACTAAAAGTGGAGCTGTAGAAGTTGAGGGTCTAACAGATGTTGCAATTCAAGACCTCAAGAAGGCCAACCAGTGGTACTGCAGAGGACGGCGTGCACGGTCGACGTCTTGGACAAATGTTAACGATGTTTCGAGTCGATCGCACTGGTGGGTTGATGAGCTGTTCAATCACAAATTTTCAGTTACTGCAGTGTGGTAGCTTGGACAGTACCCAATTTTATGTGCCTTAGCTCTGTTTGTGTGTAGCTTGACAAGAATTACCATAAAGAGAAGTAGTGGAGGTACCACTGAAGAATGCAGCAAGCTATGGCTTGTCGATCTTGGTGGAAGCGAGCGGCTGCTGAAGACCGGTGCATCTGGGTTGACAATGGATGAGGGTAAGGCCATAAACCTCTCTCTGTCAGCCCTTGGTGATGTCATCGCGGCACTTAGGCGAAAGAGAAGCCAGTTCCTTACAGGTAAACAGCCCAAGTATCTAGTTTCATTGTCAGATAAATTACGTGTTTCAAACTTTCAGTTACATTTATGGATTCAGTACTTTATGTTTACCTTGTTTCTCAATATCTGCAGAAACAGTAAGCTTACCCAGATTCTCAGTGATTCACTTGGTAAGGAACTAAGGATCTTTTTTTTTCTGAATAACTCGAAGTATCAAAAGTTCTTTTGGATAAAATTTTATACTGGTGAATTTCTGAATCAACAGGTGATGGGTCAAAGGTTCTGATGGTAGTACATATCAGCCCTTCTGATGATGATATTGGTGAAACAGTCTGTTCACTGAGCTTTGCGAAAAGAGCCCGGTCAATCGAGTCCAGCAAAGAACTTTCAGAAGTAAGTAATGGAGATTTAATGTGCAATTATCTTCACCTCGAGGAAATGTGTTTTTCCTGATATGTAAAGATGCACCTTTTTCATGATTCAGGACATAAAGAAGCTGAAGCAGAAGCGGATCGCAGAGCTTGACAAGGAAATATGCGACTCCGAGCAAGAGCTCAAGGATCTCAATGAACAGATAAAGAGAGCTGAAACCTCACTTGAAGAGAGGAAGAAGCTCTCTTCATCTGTCTGTCAGGCTCTCAGTGATGAGAAGGGGTCACCGAGAAGCACTCTAGTGGTAGTAGGCCACACTGATTCTGCAGAGAGCCCTCAAGCAACTGAGAAAACAAAGAGCAGAGCATCTCATGGATCAGTTCCTCACTTCATGTCCCCAACAGTTTGCAGCAGGCAAAGACATAGTTCAGCAAGCCACTCTGCTACTAAAACAAGGCTGACAAAATCAGTGAACAGGTATCCTGCAGCTGAGCTCAGTGGGAGCCATTCCTTCAGCTACTCAAGCTGCAAGAATGCAGCCAAGGCTAGGTCAGTGGCATTCTCATCCAGCATGCCCAAGATGAAATGTTTGCCACTCAAGTCTGATCAGATCAACATGAGCAACAACAGCATCGATTCGACGGCGGCGTCAGCGCCTCGAAGGAGGGAGAGCTTCATTTCTAGACCAGCTCAGAGAGCTCCCTTGCATCAGCACAGGAGAAGGATGTCTAGCCTGACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027381