BGIOSGA027391

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Revision as of 07:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027391| Description = Japonica Group Os08g0242400 (Os08g0242400) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA027391, complete gene....")
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Gene Name

BGIOSGA027391

Description

Japonica Group Os08g0242400 (Os08g0242400) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA027391, complete gene.

LocusTag

NM_001067876.1

Ensembl Transcript ID

BGIOSGA027391-TA

Ensembl Protein ID

BGIOSGA027391-PA

Length

1176

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9299434..9300609

Sequence Coding Region

9299952..9300609,9299592..9299770),complement(9299434..9299451

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9299434..9300609 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9299434..9300609 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACCGCACTGCGACTGCAAGCTGGGAGGTCATGAGCCGGCGAGGTGAGCAGCAGCAGCAGCTGATGATGCAAGCTCCGGCCAGCCATAATGGTGGCAGCGGCGGCGGCGAGCCGGCGAGGTCGCGGTGGGCGCCGAAGCCGGAGCAGATCCTGATACTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGGCCAAGGACGAGACGGCGCGCATCCGCCGCCTCCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCCGCTCCCGCCGCCGCGCCCGCCAGCTCCAGCAAGCCTGCGGCGCCGCCCTCCATCAGCTCCCCTCCGCCGCCGCCGCCGCCGGAGCCGGAGGAGGAGGAGGTTACTATCACCACCACCACCAACCTTCTTCTTCTCCTTTCCTCATGCACGGCGGTGGCGGCGGCGGCGTGGTCACTTCGACGACCGCGGCGCCAGCGGTGGCGGCGTCCGGCCACTTCTTGGCGGACGAGGTCGACGGCGGCGGCGACGACGACCTCTTCGCCATCTCCCGGCAGATGGGCCTCATGGCTCGCCACGGCGGCGGCGACCACCATTACGGCAGCTACGCGGACAGCGACGCCACCCAGCTCAGCTACCAACCAACCGGGACGATCCAAGTGTTCATCAATGGCGTCGCATACGATGTGCCGAGCGGCGGAGCGCTGGACATGGCCGGCACGTTTGGCCGCGACGCCATGCTGGTGCACTCCTCCGGCGAGGTCCTTCCGGTGGACGAGCACGGCGTGCTCATCAACAGCTTGCAGATGGGGGAGTGCTACTACCTGGTTTCAAAATCGATCTGA</cdnaseq>

Protein Sequence

<aaseq>MDRTATASWEVMSRRGEQQQQLMMQAPASHNGGSGGGEPARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQNRRSRSRRRARQLQQACGAALHQLPSAAAAAGAGGGGGYYHHHHQPSSSPFLMHGGGGGGVVTSTTAAPAVAASGHFLADEVDGGGDDDLFAISRQMGLMARHGGGDHHYGSYADSDATQLSYQPTGTIQVFINGVAYDVPSGGALDMAGTFGRDAMLVHSSGEVLPVDEHGVLINSLQMGECYYLVSKSI</aaseq>

Gene Sequence

<dnaseqindica>1..658#840..1018#1159..1176#ATGGACCGCACTGCGACTGCAAGCTGGGAGGTCATGAGCCGGCGAGGTGAGCAGCAGCAGCAGCTGATGATGCAAGCTCCGGCCAGCCATAATGGTGGCAGCGGCGGCGGCGAGCCGGCGAGGTCGCGGTGGGCGCCGAAGCCGGAGCAGATCCTGATACTGGAGTCCATCTTCAACAGCGGCATGGTGAACCCGGCCAAGGACGAGACGGCGCGCATCCGCCGCCTCCTCGAGCGCTTCGGCGCCGTCCGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCCGCTCCCGCCGCCGCGCCCGCCAGCTCCAGCAAGCCTGCGGCGCCGCCCTCCATCAGCTCCCCTCCGCCGCCGCCGCCGCCGGAGCCGGAGGAGGAGGAGGTTACTATCACCACCACCACCAACCTTCTTCTTCTCCTTTCCTCATGCACGGCGGTGGCGGCGGCGGCGTGGTCACTTCGACGACCGCGGCGCCAGCGGTGGCGGCGTCCGGCCACTTCTTGGCGGACGAGGTCGACGGCGGCGGCGACGACGACCTCTTCGCCATCTCCCGGCAGATGGGCCTCATGGCTCGCCACGGCGGCGGCGACCACCATTACGGCAGCTACGCGGACAGCGACGCCACCCAGCTCAGCTACCAACCAACCGGTCAGTGAGGAGCTACCAAATTTGCATTGCATGTACTAAAAAACATCACAGCTCACCATGGATTTCAAGCAAGCTAGCCATTGAAGATGATGATCATATGTGCTATATATATGTGCATTTTAATTTACTCATGGATTAATTACTAATGAAGATATATGTAAAACATATATATGTTTCGCAGGGACGATCCAAGTGTTCATCAATGGCGTCGCATACGATGTGCCGAGCGGCGGAGCGCTGGACATGGCCGGCACGTTTGGCCGCGACGCCATGCTGGTGCACTCCTCCGGCGAGGTCCTTCCGGTGGACGAGCACGGCGTGCTCATCAACAGCTTGCAGATGGGGGAGTGCTACTACCTGGTTAGTTTGTGAATTGATTAATTAATTAATCTCTTCATTTCAATTAAAGTTGTAGTGACATGTTCATGATCTCCTTTTGTTGAGTTCAGACTTCAGAGTTGATTTAATTTGTATTCTTCTTGCTTGATTTTTGTCGGTAGGTTTCAAAATCGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027391