BGIOSGA027392

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Revision as of 07:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027392| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027392, complete gene.| tag = OS08G02...")
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Gene Name

BGIOSGA027392

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027392, complete gene.

LocusTag

OS08G0241800

Ensembl Transcript ID

BGIOSGA027392-TA

Ensembl Protein ID

BGIOSGA027392-PA

Length

4903

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9269224..9274126

Sequence Coding Region

9274073..9274126,9273289..9273408),complement(9271762..9272862,9271403..9271652),complement(9271134..9271298
,9270794..9271032),complement(9270633..9270665,9270448..9270529),complement(9270199..9270359
,9269929..9270099),complement(9269608..9269790,9269224..9269517

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9269224..9274126 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9269224..9274126 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGACGGCGGATGCGCTCGAGCAGATCAAGAACGAGGCCGTTGATCTGGAGCACATCCCGTTGGAGGAGGTTTTCCAGAATCTGAAATGCACTCGGGAAGGACTCACCAACGCCGAGGGCGACGCCCGCACCCAAGTCTTCGGCCCCAACAAACTCGAAGAGAAAAAGGAGAGCAAGATACTGAAGTTTCTGGGGTTCATGTGGAACCCGCTGTCGTGGGTGATGGAGGTGGCGGCGATCATGGCGATCGCGCTGGCGAACGGCGGCGGGCGGCCGCCGGACTGGCAGGACTTCGTCGGGATCATCGCGCTGCTGTTGATCAACTCCACCATATCCTACTGGGAGGAGAGCAACGCCGGCAGCGCCGCGGCGGCGCTCATGAAGAACCTCGCCCCCAAGACCAAGGTGCTCCGCGACGGCAGGTGGTCGGAGACCGACGCCTTCGTCCTCGTCCCCGGCGACGTCATCAGCGTCAAGCTCGGCGACATCGTCCCCGCTGACGCCCGCCTCCTCGACGGCGATCCCCTCAAGATCGACCAGTCAGCGCTCACCGGCGAGTCCCTGCCGGTCACCAAGCTCCCCGGCGACTGCGTCTACTCCGGGTCGACGTGCAAGCAGGGGGAGATCGACGCCGTCGTCATCGCCACCGGCGTCCACACCTTCTTCGGCAAGGCGGCGCACCTCGTCGACACCACCAACCAGGTCGGCCACTTCCAGAAGGTCCTCCGCGCCATCGGCAACTTCTGCATCGGCGCCATCGCCATCGGCATGGCCGTCGAGGTCATCGTCATGTACCCGATCCAGCACCGCCTCTACCGCGACGGCATCGACAACCTCCTCGTGCTGCTCATCGGCGGCATCCCCATCGCCATGCCCACCGTGCTGTCAGTCACCATGGCCATCGGCTCGCACCGCCTCTCTGACCAGGGCGCCATCACCAAGCGGATGACGGCGATCGAGGAGATGGCCGCCATGGACGTGCTCTGCAGCGACAAGACCGGGACGCTCACGCTGAACAAGCTCAGCGTCGACAGGGGCCTCATCGAAGTGTTCGTCCAGGGCCTCGCCAAGGACGAGGTGATCTTCCTCGCCGCCAGGGCGTCGCGCGTCGAGAACCAGGACGCCATCGACACCGCCATGGTCGGCATGCTCGACGACCCCAAGGAGGCACGCGCCGGCATCCGGGAGGAGCACTTCCTCCCCTTCAACCCCGTCGACAAGCGCACCGCCCTCACCTACGTCGACCTCGCCGACGGCTCATGGCACCGTATTCTGGATCTGTGCAAATGCAGCCAGGACGTGAGGAGCAAGGTGCACGCCATAATCGACAGGTACGCCGACCGGGGCCTCCGGTCGCTCGCCGTGGCGAGGCAGGAGGTGCCGGACAGGAGGAAGGACAGCCCTGGCGGGCCGTGGGAGTTCGTCGGCCTGCTGCCGCTGCTCGACCCGCCGCGCCACGACAGCGCCGAGACCATAAGGCGGGCGCTCCACCTCGGCGTCAACGTCAAGATGATCACCGGTGATCAGCTCGCCATTGCCAAGGAGACCGGGAGGAGGCTCGGGATGGGCGTGAACATGTACCCCTCGTCGGCGCTGCTCGGCCAGAGCAAGGACGAGTCCATCGCCTCCGTCCCCGTCGACGAGCTCATCGAGAAGGCCGACGGCTTCGCCGGCGTCTTCCCAGAGCACAAGTACGAGATTGTGAAGAAGCTGCAGGAGATGAAGCACATCTGCGGGATGACCGGCGACGGCGTGAACGACGCGCCGGCGCTGAAGAGGGCGGACATCGGGATCGCCGTCGCCGACGCGACCGACGCGGCGAGGAGCGCCTCGGACATCGTGCTCACCCAGCCTGGCCTCAGCGTCATCATCAGCGCCGTCCTCACCAGCCGCGCTATCTTCCAGAGGATGAAAAATTACACGATTTACGCGGTGTCGATTACTATCCGTATTGTGCTTGGATTCATGCTGATTGCTCTCATCTGGAAGTTCGATTTCTCGCCGTTCATGATCCTCGTCATCGCGATCCTCAACGACGGAACGATCATGACAATATCCAAGGACAGGGTGAAGCCGTCGCCGCACCCGGACAGCTGGAAGCTGCCGGAGATCTTCATCACCGGCATCGTCTACGGCACCTACCTCGCCGTCATGACCGTCCTCTTCTTCTGGGCCATGAGGAGCACCGATTTCTTCACCAGCACGTTCCATGTGAAGCCACTGATGGAGAAGGACGAGATGATGTCGGCACTGTACCTGCAGGTGAGCATCATCAGCCAGGCGCTCATCTTCGTGACGCGCTCCCGCAGCTGGTGCTTCGTCGAGCGCCCCGGCATGCTGCTCTGCGGCGCCTTCGTCGCCGCGCAGATCATCGCGACGCTGGTGACGGTGTACGCCACCTTGGGGTTCGCCCACATCAAGGGCATCGGCTGGGGGTGGGCCGGCGTCATCTGGCTCTACAGCATCGTCACCTTCCTCCCCCTCGACATCTTCAAGTTCGCCGTCCGCTACGCCCTCAGCGGCCGCGCCTGGGACACCCTCATCGAGCACAAGATTGCCTTCACGAGCAAGAAGGATTACGGGAGAGGGGAGAGGGAGGCGCAGTGGGCGACGGCGCAGAGGACGCTGCACGGGCTGCAGACGCCGGAGATGGGGGACCACCTCGGCGGCGTCGGCGGCGGCGAGCGGAGCAGCTACAGGGAGCTCTCGGAGATCGCCGAGCAGGCCAAGCGCCGCGCCGAGGTGGCCCGGCTGCGCGAGCTCAGCACGCTCAAGGGCCAGATGGAGTCCACCGTCAGGCTCAAGGGCCTCGACATGGACAACGTCCAGCACCACTACACCGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAATADALEQIKNEAVDLEHIPLEEVFQNLKCTREGLTNAEGDARTQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEVAAIMAIALANGGGRPPDWQDFVGIIALLLINSTISYWEESNAGSAAAALMKNLAPKTKVLRDGRWSETDAFVLVPGDVISVKLGDIVPADARLLDGDPLKIDQSALTGESLPVTKLPGDCVYSGSTCKQGEIDAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLRAIGNFCIGAIAIGMAVEVIVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSDQGAITKRMTAIEEMAAMDVLCSDKTGTLTLNKLSVDRGLIEVFVQGLAKDEVIFLAARASRVENQDAIDTAMVGMLDDPKEARAGIREEHFLPFNPVDKRTALTYVDLADGSWHRILDLCKCSQDVRSKVHAIIDRYADRGLRSLAVARQEVPDRRKDSPGGPWEFVGLLPLLDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGVNMYPSSALLGQSKDESIASVPVDELIEKADGFAGVFPEHKYEIVKKLQEMKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTQPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMILVIAILNDGTIMTISKDRVKPSPHPDSWKLPEIFITGIVYGTYLAVMTVLFFWAMRSTDFFTSTFHVKPLMEKDEMMSALYLQVSIISQALIFVTRSRSWCFVERPGMLLCGAFVAAQIIATLVTVYATLGFAHIKGIGWGWAGVIWLYSIVTFLPLDIFKFAVRYALSGRAWDTLIEHKIAFTSKKDYGRGEREAQWATAQRTLHGLQTPEMGDHLGGVGGGERSSYRELSEIAEQAKRRAEVARLRELSTLKGQMESTVRLKGLDMDNVQHHYTV</aaseq>

Gene Sequence

<dnaseqindica>1..54#719..838#1265..2365#2475..2724#2829..2993#3095..3333#3462..3494#3598..3679#3768..3928#4028..4198#4337..4519#4610..4903#ATGGCGGCGACGGCGGATGCGCTCGAGCAGATCAAGAACGAGGCCGTTGATCTGGTGAGGGAGAAGCTAATTATAAGCTGCTAGCTGCTGCTGATTGATCGTGCAAGTTCAAATGCTAGGGCTTTTGTTTTGTTTTTTTGAGAGTTTTTTTGTGGTGAAGTTTTGTTCGTGATGGAACTTGAAAGAAAACTAGATTTTCTTTTTCCTATACTGATGATTTTGTTGTATTTTTTGTTCTGGTTGTTTTCTCGAATGCAACTAATCTTAATTAGCAGTAGATTGATCTTGACTAAAAAGAAGAGTTAGAGACGGTTTGAGTTCTTGCGGTGACATTAATTGCCAGAAAAGAGAGAAAGCAGATCGAATCTGATTTGCTTCACGGATTCAATCTCCTCTTTCGTTCATGTGATCAACCAAAAAAAAATCTCTCTTTTTTGTTAATCTGCTTTAATTCACGAGAGAATTAGGATGCACTACTCTCTCTAGAGCTAGCGCAAGCTGGCCCATGCAATTCTTTCCTTTTTTTTTCTCTTTCGCGGCTTTTACTGCAGCTAGCTAGCCAACCACCTACTCATAATCATCGATTAGTTTTTTTTGCCTCTCTTTGTTGCAAGATTTTATCTGCAGGTTAATTAGTTTTAATCACATTGTCAATTAATCTATGTTTGTAACTTGCTAAATCGATCTATCTAATCTAATCGTCTTCCATCCATGGCAGGAGCACATCCCGTTGGAGGAGGTTTTCCAGAATCTGAAATGCACTCGGGAAGGACTCACCAACGCCGAGGGCGACGCCCGCACCCAAGTCTTCGGCCCCAACAAACTCGAAGAGAAAAAGGTCCAATGTTTGTTCTTGTTTGATCCTTAATATATCATTATCCAAAGTTTCAAATGTTCATATAAAAGTAAATTCAAAATGTTCATTATTTTCATTAAATAAAATTCAATTGGACATGAAATAATTATCGTTCAAACATTTTAAAAGATGAATCTTGAATATATCATCCAAAGTTTCAAATGTTCATATAAAAGTAGATATCCAAATGTTCATCTAATGATATTATTTTCATCGAACTAAATTCAATTTAACATAAAAATAATTATCGTTCAAACAGTTTAAAAGTTAAATCTTAAAATACATGCGTAGCTTAATTATTTAGTGGGGCGGAGGGAATGGTTGTTTGAAGATAATCGATTGATCTTTGGAGTGGTGGTGTAACATGATTTTGATTTGATTTGATTTTGATTTTGACGATGAGCACAGGAGAGCAAGATACTGAAGTTTCTGGGGTTCATGTGGAACCCGCTGTCGTGGGTGATGGAGGTGGCGGCGATCATGGCGATCGCGCTGGCGAACGGCGGCGGGCGGCCGCCGGACTGGCAGGACTTCGTCGGGATCATCGCGCTGCTGTTGATCAACTCCACCATATCCTACTGGGAGGAGAGCAACGCCGGCAGCGCCGCGGCGGCGCTCATGAAGAACCTCGCCCCCAAGACCAAGGTGCTCCGCGACGGCAGGTGGTCGGAGACCGACGCCTTCGTCCTCGTCCCCGGCGACGTCATCAGCGTCAAGCTCGGCGACATCGTCCCCGCTGACGCCCGCCTCCTCGACGGCGATCCCCTCAAGATCGACCAGTCAGCGCTCACCGGCGAGTCCCTGCCGGTCACCAAGCTCCCCGGCGACTGCGTCTACTCCGGGTCGACGTGCAAGCAGGGGGAGATCGACGCCGTCGTCATCGCCACCGGCGTCCACACCTTCTTCGGCAAGGCGGCGCACCTCGTCGACACCACCAACCAGGTCGGCCACTTCCAGAAGGTCCTCCGCGCCATCGGCAACTTCTGCATCGGCGCCATCGCCATCGGCATGGCCGTCGAGGTCATCGTCATGTACCCGATCCAGCACCGCCTCTACCGCGACGGCATCGACAACCTCCTCGTGCTGCTCATCGGCGGCATCCCCATCGCCATGCCCACCGTGCTGTCAGTCACCATGGCCATCGGCTCGCACCGCCTCTCTGACCAGGGCGCCATCACCAAGCGGATGACGGCGATCGAGGAGATGGCCGCCATGGACGTGCTCTGCAGCGACAAGACCGGGACGCTCACGCTGAACAAGCTCAGCGTCGACAGGGGCCTCATCGAAGTGTTCGTCCAGGGCCTCGCCAAGGACGAGGTGATCTTCCTCGCCGCCAGGGCGTCGCGCGTCGAGAACCAGGACGCCATCGACACCGCCATGGTCGGCATGCTCGACGACCCCAAGGAGGCACGCGCCGGCATCCGGGAGGAGCACTTCCTCCCCTTCAACCCCGTCGACAAGCGCACCGCCCTCACCTACGTCGACCTCGCCGACGGCTCATGGCACCGTGTCAGCAAGGGCGCCCCCGAGCAGGCAACCCACCCTCATCCATGGATCCCGATTCGATTCGATCTTTCGTCGCCGCCATTGCTCACTTGCTTGCTTGTTGATCTTGCAGATTCTGGATCTGTGCAAATGCAGCCAGGACGTGAGGAGCAAGGTGCACGCCATAATCGACAGGTACGCCGACCGGGGCCTCCGGTCGCTCGCCGTGGCGAGGCAGGAGGTGCCGGACAGGAGGAAGGACAGCCCTGGCGGGCCGTGGGAGTTCGTCGGCCTGCTGCCGCTGCTCGACCCGCCGCGCCACGACAGCGCCGAGACCATAAGGCGGGCGCTCCACCTCGGCGTCAACGTCAAGATGATCACCGGTACACCTCAACCCACGCCCAGCTGCTTTTCGTCGAACACATGGTGGGTGTGCAAATGCAGTCCGTGATCCTGTGATTTGCTTGCGTTGCCATTGCTGGTGCAGGTGATCAGCTCGCCATTGCCAAGGAGACCGGGAGGAGGCTCGGGATGGGCGTGAACATGTACCCCTCGTCGGCGCTGCTCGGCCAGAGCAAGGACGAGTCCATCGCCTCCGTCCCCGTCGACGAGCTCATCGAGAAGGCCGACGGCTTCGCCGGCGTCTTCCCAGGTACACGAATTATTATGCATTCTCAAAGCCGCCATGGCCGGACTTGCAGGTTCTTGATATCTGAACACAATGTCGCCATTGTCGTCTGTCTTGTGGTGCAGAGCACAAGTACGAGATTGTGAAGAAGCTGCAGGAGATGAAGCACATCTGCGGGATGACCGGCGACGGCGTGAACGACGCGCCGGCGCTGAAGAGGGCGGACATCGGGATCGCCGTCGCCGACGCGACCGACGCGGCGAGGAGCGCCTCGGACATCGTGCTCACCCAGCCTGGCCTCAGCGTCATCATCAGCGCCGTCCTCACCAGCCGCGCTATCTTCCAGAGGATGAAAAATTACACGGTACAGCATTTGTCTTGGCTGCATTCAGAATGAATTTGAGAGCATGAATTTCTCGATCAGAATCATCAGAGATTGATTTTTTTTTTTACTGATGATCATTGTTTCCATGTTGTTTATGATCTCTCCAGATTTACGCGGTGTCGATTACTATCCGTATTGTGGTAAGTAAACTGTTCTTGCTGCTAGTCCTTCAAGGATCTCATCAACCTGACCAACAATGCCATGAAATTCGTCTGAAAATTTTCCCCTGTTGTCAATCTGAAGCTTGGATTCATGCTGATTGCTCTCATCTGGAAGTTCGATTTCTCGCCGTTCATGATCCTCGTCATCGCGATCCTCAACGACGGTGAGTTCTTGAACACAACAAAAATTGAACTTCTGATCCACACACACACACACACAATTTTAGCTGATGTACCTGATTGATGATGCAGGAACGATCATGACAATATCCAAGGACAGGGTGAAGCCGTCGCCGCACCCGGACAGCTGGAAGCTGCCGGAGATCTTCATCACCGGCATCGTCTACGGCACCTACCTCGCCGTCATGACCGTCCTCTTCTTCTGGGCCATGAGGAGCACCGATTTCTTCACCGTAAGCAAACAATCAAACAAACAGATCCAAAGAATCCTCAAAAACCTTTTGATTCCACTGCTCTGATCGAATTCAAATTGAATTTGGTTGTGTGCGCAGAGCACGTTCCATGTGAAGCCACTGATGGAGAAGGACGAGATGATGTCGGCACTGTACCTGCAGGTGAGCATCATCAGCCAGGCGCTCATCTTCGTGACGCGCTCCCGCAGCTGGTGCTTCGTCGAGCGCCCCGGCATGCTGCTCTGCGGCGCCTTCGTCGCCGCGCAGATCGTAAGCATCTCGATCTCCATCTTCTTGTTCTTAGCTGCTGCAACTGCAAATGCCAATGCCATTGCCGCCATTGATGGACTGATTTGGTGCTGCAAATGCCAATGCCATTGCCGCCATTGATGGACTGATTTGGTGCAGATCGCGACGCTGGTGACGGTGTACGCCACCTTGGGGTTCGCCCACATCAAGGGCATCGGCTGGGGGTGGGCCGGCGTCATCTGGCTCTACAGCATCGTCACCTTCCTCCCCCTCGACATCTTCAAGTTCGCCGTCCGCTACGCCCTCAGCGGCCGCGCCTGGGACACCCTCATCGAGCACAAGGTAACCTTGCCATAACAACAAACACCTTGCCTGCATGTGTTTTTCTCCTCGCGGAATAACTACAAACACCTTGCGTGCGTGCGCGTGCAGATTGCCTTCACGAGCAAGAAGGATTACGGGAGAGGGGAGAGGGAGGCGCAGTGGGCGACGGCGCAGAGGACGCTGCACGGGCTGCAGACGCCGGAGATGGGGGACCACCTCGGCGGCGTCGGCGGCGGCGAGCGGAGCAGCTACAGGGAGCTCTCGGAGATCGCCGAGCAGGCCAAGCGCCGCGCCGAGGTGGCCCGGCTGCGCGAGCTCAGCACGCTCAAGGGCCAGATGGAGTCCACCGTCAGGCTCAAGGGCCTCGACATGGACAACGTCCAGCACCACTACACCGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027392

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027392&oldid=33649"