BGIOSGA027401

From RiceWiki
Revision as of 07:42, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027401| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027401, complete gene.| tag = P0005H1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027401

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027401, complete gene.

LocusTag

P0005H10.12

Ensembl Transcript ID

BGIOSGA027401-TA

Ensembl Protein ID

BGIOSGA027401-PA

Length

1732

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8978335..8980066

Sequence Coding Region

8979956..8980066,8979413..8979475),complement(8979082..8979321,8978335..8979006

Genome Context

<gbrowseImage1> name=IndicaChromosome08:8978335..8980066 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:8978335..8980066 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGCGCTCATTCTGGTTGGAGGCTTCGGCACTCGCCTTCGGCCTTTAACGCTCAGTTTCCCAAAGCCTCTTGTTGATTTCGCGAACAAGCCCATGATTCTGCATCAGATTGAGGCCTTGAAAGAAGTTGGAGTAACAGAAGTTGTTTTAGCCATCAACTACCGCCCGGAGGTAATGCTCAATTTCCTGAAGGACTTTGAGGATAAGCTTGGCATCACAATCACGTGTTCCCAAGAGACTGAGCCCTTGGGAACTGCTGGCCCTCTTGCTCTAGCAAGGGACAAGCTTGTGGATGGATCTGGTGAGCCATTCTTTGTCCTCAACAGTGACGTCATAAGTGAATACCCTTTTGCTGAGCTCATAAAATTTCACAAGAACCATGGTGGTGAGGCAACAATTATGGTCACCAAGGTGGACGAACCATCAAAATATGGTGTTGTGGTTATGGAGGAGGCCACTGGAATGGTGGAAAAATTTGTTGAGAAACCAAAAATATTTGTAGGCAACAAGATCAATGCAGGAATTTACTTGTTGAACCCGTCTGTCCTGGACCGCATCGAGCTAAAGCCAACTTCAATTGAGAAAGAGGTCTTTCCTCGAATCTCAGCTGATGCAAAGCTCTTTGCTATGGTCCTTCCAGGTTTTTGGATGGATGTTGGCCAACCAAGGGATTACATTACAGGCTTGCGCCTTTATCTGGATTCACTTAGGAAGAGATCAGCCAACAGGTTAGCCACTGGAGCACACATTGTTGGGAATGTGCTAGTTCACGAGAGTGCGAAGATTGGCGAAGGCTGTCTGATTGGTCCTGATGTTGCTATTGGTCCTGGATGCGTCGTGGAGGATGGTGTGAGGCTTTCCCGTTGCACGGTGATGCGTGGCGTGCGTATTAAGAAGCATGCTTGCATATCAAACAGCATTATTGGATGGCACTCAACTGTTGGACAATGGGCACGGATAGAAAATATGACTATCCTAGGAGAGGACGTACATGTAGGTGATGAGGTCTATACCAACGGCGGTGTTATTCTCCCGCACAAAGAGATCAAATCAAGCATCCTGAAACCTGAGATTGTCATGTGA</cdnaseq>

Protein Sequence

<aaseq>MKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKEVGVTEVVLAINYRPEVMLNFLKDFEDKLGITITCSQETEPLGTAGPLALARDKLVDGSGEPFFVLNSDVISEYPFAELIKFHKNHGGEATIMVTKVDEPSKYGVVVMEEATGMVEKFVEKPKIFVGNKINAGIYLLNPSVLDRIELKPTSIEKEVFPRISADAKLFAMVLPGFWMDVGQPRDYITGLRLYLDSLRKRSANRLATGAHIVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYTNGGVILPHKEIKSSILKPEIVM</aaseq>

Gene Sequence

<dnaseqindica>1..111#592..654#746..985#1061..1732#ATGAAGGCGCTCATTCTGGTTGGAGGCTTCGGCACTCGCCTTCGGCCTTTAACGCTCAGTTTCCCAAAGCCTCTTGTTGATTTCGCGAACAAGCCCATGATTCTGCATCAGGTAATATGTGGTTTCGCTAGTACTCTGATGGAGTAATAAGAGCACTTAATTTGCAATGCCAATCGATGAATTGGGCACAAGTTAATTAGTACAGTATTCTTTACCAACATTCCAACACTGACACTGGCCTCTCCATGAAAGGAGGGAGAGGGTGTTAAACTGGTCAAAGAACATTAATACTATTTGATTTGTTTATAACCCCCACATAAACATGGTGTAACAACTAAACATCCATGATAGGTGGCATTTGCATGTGATTGAATGCACCTTTTTACTATTCAACTGTTTCTTTCCTTATCAATTTGGTTACATGATTTTGGAGAACTCTTTTGGTATCACACCAAATTTTCTGTCCTTGAAAATTCCAATCAGTTATCAAGAGTACTTCATTTATATCCAAAATGTTGGCTCCAGCAAACATGAGCATGAGGATTGAGGAGAGTAATGAGCTCTGAATTAAAAGTTTTCTGGTTTATGCAGATTGAGGCCTTGAAAGAAGTTGGAGTAACAGAAGTTGTTTTAGCCATCAACTACCGCCCGGAGGTAAAAAGGAGATAATATTTTACTGTTGTCTCATGGTATAAGTATAACTATCTTCGCATTCTAATTGGTTTGTTCTGTATCCGTCTTTTAGGTAATGCTCAATTTCCTGAAGGACTTTGAGGATAAGCTTGGCATCACAATCACGTGTTCCCAAGAGACTGAGCCCTTGGGAACTGCTGGCCCTCTTGCTCTAGCAAGGGACAAGCTTGTGGATGGATCTGGTGAGCCATTCTTTGTCCTCAACAGTGACGTCATAAGTGAATACCCTTTTGCTGAGCTCATAAAATTTCACAAGAACCATGGTGGTGAGGCAACAATTATGGTCACCAAGGTAGATCCTTTCTTTGACCACTTTCTTGGATTATAAACTCGTTGATTGTGTATACTGACTATTATTTCAATGTAGGTGGACGAACCATCAAAATATGGTGTTGTGGTTATGGAGGAGGCCACTGGAATGGTGGAAAAATTTGTTGAGAAACCAAAAATATTTGTAGGCAACAAGATCAATGCAGGAATTTACTTGTTGAACCCGTCTGTCCTGGACCGCATCGAGCTAAAGCCAACTTCAATTGAGAAAGAGGTCTTTCCTCGAATCTCAGCTGATGCAAAGCTCTTTGCTATGGTCCTTCCAGGTTTTTGGATGGATGTTGGCCAACCAAGGGATTACATTACAGGCTTGCGCCTTTATCTGGATTCACTTAGGAAGAGATCAGCCAACAGGTTAGCCACTGGAGCACACATTGTTGGGAATGTGCTAGTTCACGAGAGTGCGAAGATTGGCGAAGGCTGTCTGATTGGTCCTGATGTTGCTATTGGTCCTGGATGCGTCGTGGAGGATGGTGTGAGGCTTTCCCGTTGCACGGTGATGCGTGGCGTGCGTATTAAGAAGCATGCTTGCATATCAAACAGCATTATTGGATGGCACTCAACTGTTGGACAATGGGCACGGATAGAAAATATGACTATCCTAGGAGAGGACGTACATGTAGGTGATGAGGTCTATACCAACGGCGGTGTTATTCTCCCGCACAAAGAGATCAAATCAAGCATCCTGAAACCTGAGATTGTCATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027401