BGIOSGA027438

From RiceWiki
Revision as of 07:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027438| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027438, complete gene.| tag = OS08G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027438

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027438, complete gene.

LocusTag

OS08G0224900

Ensembl Transcript ID

BGIOSGA027438-TA

Ensembl Protein ID

BGIOSGA027438-PA

Length

4110

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8177729..8181838

Sequence Coding Region

8181655..8181838,8181485..8181545),complement(8180614..8180758,8179697..8179930),complement(8178779..8178850
,8178156..8178432),complement(8177796..8177858,8177729..8177739

Genome Context

<gbrowseImage1> name=IndicaChromosome08:8177729..8181838 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:8177729..8181838 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCCACCGCCGCAGCGCCCGCGAGATCCGCGCTCCCCTTCCGGAGCCGCGTCGCCGCCGCAGCACGCCCAGGACGCGCGCCGGCGCTGTCGGCCGCCCCGGGAAGGCGCCTCGTCGCGCGCCGCGCCGCGGGCGACGGCCAGGCGGTGGAGGCTCAGGAGGCGCTCCCCATCGAGAAAAGGTTCCCTCCCTTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTGCCCCACAGGTTTCCATTCCTCCTGGTTGATAGAGTTATTGAGTACAAGGGAGGAGAATATGCAGTTGGGATCAAGAATGTCACGATAAATGATAACTTCTTCCCTGGGCATTTCCCCGAACGACCCATAATGCCTGGTGTTCTCATGGTTGAGGCTATGGCCCAGGTTGGGGGTCTGGTGATGTTGCAGCCTGAAATTGGCGGATCTCGGGACAATTTCTTCTTTGCAGGAATTGATAAAGTGAGGTTCCGTAAGCCAGTAATTGCAGGGGATACCTTGATCATGAGAATGACTCTGACCAAGTATCAGAAAAGATTTGGTCTTGCCAAGATGGAAGGAAAAGCTTACGTTGGTGGTGACCTAGTGTGCGAGGGGGAGTTCCTCCTGAGGAAAGAACATGATGAGGTGGCCAACAATGGATTGTCCATCTTTCTTGATCCTAAGAGGCTCAAATTACAGGATGGTGAGATTCCAAACACGATGGAGGAAGAGAAACCATCAGCAGGTGTTCAACCTGATCCTACTGTGCCAACCATGGCCTTATCATGGATGCTACCAACTCAGGGCCAAGAGACTATCCATGACACTATGAACACTGCATATGAGATGTCATCTTCAGAAACGCCGCCACTCAGAGCAGACCAAGCCGCCGCCGCGGCGCCGATGGACGTCGAGGTTCAGCTCCGGCAGCGGCAGCCTCAGGCGCCGCCGTGTCAGCAGGCTCATTTCTGGTCAGTTAGTAATGATGAAGACATGTGGGCTGGATATTGGAAATATTTGGCGAGTGAAATATCAATTTGTTTCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEATAAAPARSALPFRSRVAAAARPGRAPALSAAPGRRLVARRAAGDGQAVEAQEALPIEKRFPPFPSVMDINQIREILPHRFPFLLVDRVIEYKGGEYAVGIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEIGGSRDNFFFAGIDKVRFRKPVIAGDTLIMRMTLTKYQKRFGLAKMEGKAYVGGDLVCEGEFLLRKEHDEVANNGLSIFLDPKRLKLQDGEIPNTMEEEKPSAGVQPDPTVPTMALSWMLPTQGQETIHDTMNTAYEMSSSETPPLRADQAAAAAPMDVEVQLRQRQPQAPPCQQAHFWSVSNDEDMWAGYWKYLASEISICFF</aaseq>

Gene Sequence

<dnaseqindica>1..184#294..354#1081..1225#1909..2142#2989..3060#3407..3683#3981..4043#4100..4110#ATGGAGGCCACCGCCGCAGCGCCCGCGAGATCCGCGCTCCCCTTCCGGAGCCGCGTCGCCGCCGCAGCACGCCCAGGACGCGCGCCGGCGCTGTCGGCCGCCCCGGGAAGGCGCCTCGTCGCGCGCCGCGCCGCGGGCGACGGCCAGGCGGTGGAGGCTCAGGAGGCGCTCCCCATCGAGAAAAGTCCGGTTCCCCTCCTCTCTCTCTCTCTCTCTCTCGCTCCGTATGGCATCGGTTGCCTGTGTTCGCCATTAACTGAGGGAGATATGTTCGTTTATTTTGCCTCTCGCAGGGTTCCCTCCCTTCCCGAGCGTCATGGACATCAACCAGATCCGCGAGATCCTGCCCCACAGGTGAGCTCTAACCGCATTCCGCTGCTGCTGCTGCTGCAGGATAGCTCTTTGCCTTACCTTGTGTGTTTCATTTCGCTTGTAAGATGTTGGCAATGCGAAACCATTCGAATTACTCGATACAAATCGAAATTATACCCTTTTGAAGTTCGATGAGAGGCATATGAACTGTGCGTGCAATCTGTTGAAAACAAAAAAAAAAAAACAATATCCTGATATTAGAGTTAACCTCATACTCTTTTTTATTATTATTTTCAGTACTAGCTAAAGGCCCGTGCGTTGCAACGGATATTATAAAAGATAAAAACAAAAGTAAAAATTGCAACTTCATAGCATAGTTAGTTGATTAGGCATATAATGCCATGTCCAAAGCAAAAACAATCACGTGTGGGGATTTTATGGCTCTACATGTCAACTTGTGGCGTTGGAGGCAGACTCGGACACTACCACTAGCATCATTAAAGCAGTATAGATAGGTGAAAGAAAAAGATGCTTCATAGCCCTCTGAATTAATGGAAGCTTTATGTTCATTTCCTTTGAGCTCACTTGGTGAAGAAAGGCATTGTCTTTTTTACTAGAAAGTACTAACATGCATCTTGGATATTTTTATGCTCGCCTATGTGGATATACACCTGATGAGCCCAAGCAAGAGAAATGATTGGTGATGATTCACGAATATGTAATTGTTTAGTATTTTCTCTAACTTGTGCATTTGAATGTGAATGTTAGGTTTCCATTCCTCCTGGTTGATAGAGTTATTGAGTACAAGGGAGGAGAATATGCAGTTGGGATCAAGAATGTCACGATAAATGATAACTTCTTCCCTGGGCATTTCCCCGAACGACCCATAATGCCTGGTGTTCTCATGGTTGAGGTATGATTCCACTATATTGGCATCCATGTGCTGTGATCAAATTGTTTAGTATATATGGCCTCTGTTGTTTCCTGAGGTTTGATCATCTCTCATTGTGGTCTCTGTACATTATCTATAGAAATGCCAGTTCATGCTACGCTACTTAGTTCTTCATTTAATTTTACTATGACCTCATTCTATCATTTTTTTTTTTTTTGCAGTCTGAGCATATTGATACTCAATTCATCCATTTTCAGGGTACCAATCTCATTTAACAAAATAAAAAAAAAGTTGAATTTGATGAAAAAAGTAGTAGTACTTTCTCAAAGCCATTTTACTGCATTTTTCATCTCTGTCGAAAAGTACTATGAAGTAATAAGGAACTTGCGTCAATCGATTTGTTTAGTTTCTTGTCCTTTTCAAACTGATGAAAAGTTTTGATATCCAAGTATTCAGGCACTAGGTGGGTAATGGATATTTGGTACCATGACCAATGATTTCATGTGGGACTTGTAGAACTAATAAGTTTTATGGTAAAGGTTTTGCAACAACTATGTTTTCATAATCCAAACTGAACCAATGGCGCAACTTAGAACCCATAAATAGATGAGGACATGGCTGGATGTTTTTTAATTGCTTATTGTTCTATCATCAAGTAGACAAACATCTGAACTTCCCTCATGTGAGGCTACCTTTATGCACAGGCTATGGCCCAGGTTGGGGGTCTGGTGATGTTGCAGCCTGAAATTGGCGGATCTCGGGACAATTTCTTCTTTGCAGGAATTGATAAAGTGAGGTTCCGTAAGCCAGTAATTGCAGGGGATACCTTGATCATGAGAATGACTCTGACCAAGTATCAGAAAAGATTTGGTCTTGCCAAGATGGAAGGAAAAGCTTACGTTGGTGGTGACCTAGTGTGCGAGGGGGAGTTCCTCCTGGTTAGCGCAACCGAATAGTGCAAAGGGCACCTAGTATTGTGTGATTCTCTTGTAGAATCATTGATTAGAACGGGATGAGGTTCATTGCTTGAGAAGAGTTGAGTTTTGAACTGAACTTACGGCTTTGAGGCTATCTTTTCATTTTACCTATTAGGTGAATTGAGTTCAAATGTCCAAGGCGCCATATGTTCCGTTCAGGCGCTTAATTCTACCTATCTGGCTGTGGTTGCTGTTGTAAACTTGTAATACATGATACAATCTCTTCCATAAGAATTTCATGAAATAAACAGTGCTTGTTCGGTTGTGCTTATATTGAATTTCTGGTGATATTTAACACTCGTTCTACTCAAACACCAGCAAGCAAATATCAAAATATTTTCATGTAATCTTCTCATAGTATTCCCATGAATTTCCCAATCTTTTGTTCTATGAAGAGTTGAAATGTCAAATGCATCACTGATGGTCTTTTTCCTATTCTTTTGTACCCAGCAGCCTCTTTGACCTTTTCTGTTTTACAAAAGGCCTTTCTTTTGCCTACAAACAACCGTAGGAAAGGGGGAAAAAAAGCTAAGGGTAAAGTACTCTCTATTCATTGTAAACGTGCAAAGTCAATTTGAATTAGTCAACACAAATACACCATAATAACATCCATGGTTGTAGTTAAATTACAACTGAACTTCGAGGAACCAAGTCATCTTGGTTGCCTAGTCAACTCTTCTGTTCACAAGAGATAAGTTGGCTGAATTCTGTTAATTAATAGACTCCAAATTACTAGATGTCCTGGGTTGTCTTGAGGCTGTCATCATAGCTTAGAACATGGCTAATCTTGTGGCAATGAACATGAAGAGGAAAGAACATGATGAGGTGGCCAACAATGGATTGTCCATCTTTCTTGATCCTAAGAGGCTCAAATTACAGGTATGGCAATGGCAATTGGCAAATGCTGTCCACTCCTCTCTCTTCTGTACTAATTCATATACATAGGATTTTGTTTTTACGAGATCGTGTTAGAAGCCAGCAGAATTTGGGCTAAATCGTAGAAAAGCATGAGACCATCAACATGGCAAGATTCCATGGTTGATTCACTTTACTCACCTCATCAGTCTATATTCTGCTTGAATTTTTCAGAAACCTAAAACCATTATCAATTCACAGTGGCAACCAAGAACATAAACTGAGGCATTCAATTCAGTTCATGTTTTGAGGGCAATTGAAACATTTAATCCATGAGCTCTAATGTTTCATCTCTTCTTGCTGTCATCAGGATGGTGAGATTCCAAACACGATGGAGGAAGAGAAACCATCAGCAGGTGTTCAACCTGATCCTACTGTGCCAACCATGGCCTTATCATGGATGCTACCAACTCAGGGCCAAGAGACTATCCATGACACTATGAACACTGCATATGAGATGTCATCTTCAGAAACGCCGCCACTCAGAGCAGACCAAGCCGCCGCCGCGGCGCCGATGGACGTCGAGGTTCAGCTCCGGCAGCGGCAGCCTCAGGCGCCGCCGTGTCAGCAGGCTCATTTCTGGTCAGGTTAGTGAACAGCAGACGATGCTAACTAGGCCATGTTGGTGATGATTTTACCTTTGAAAAAAATAGCCTTCAGGGATCAGGATTCTGGTAGTAATAAGTAGAGTAGTAGATCGAGAAACACACGGGGGTCTTCCGGCTAGCTCCGCAAAGTGGTGGGCTAGATGATTTGGGTTTGAAGACTCACCCCTTCTAATTATTTGATATTAGGTCATTCCTAATATTCGCGTCTTTTTAGTAGAGTAGTAGATCAAGCTGAATGACCATGGTGTTCTTGATTTTGATTTTTTATTTCTTCAGTTAGTAATGATGAAGACATGTGGGCTGGATATTGGAAATATTTGGCGAGTGAAATATCAATTTGTAAGTATTTTCCTTTATTTTTTGGCTAATTGAAATGATTGGTTCCTACCATGCAGGTTTCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027438