BGIOSGA027440

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Revision as of 07:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027440| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027440, complete gene.| tag = OJ1006_...")
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Gene Name

BGIOSGA027440

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027440, complete gene.

LocusTag

OJ1006_H01.121

Ensembl Transcript ID

BGIOSGA027440-TA

Ensembl Protein ID

BGIOSGA027440-PA

Length

4829

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8113740..8118568

Sequence Coding Region

8118493..8118568,8116412..8116482),complement(8116164..8116335,8115750..8115826),complement(8115380..8115677
,8115191..8115258),complement(8114594..8115079,8114227..8114439),complement(8113740..8114093

Genome Context

<gbrowseImage1> name=IndicaChromosome08:8113740..8118568 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:8113740..8118568 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGGGGAGAGGCACCGTTGGCGCCGTCATTTAGAGAGAGAGAGTGAGGGGGAGGGGAAAAGATTTCAGGATTGCATGATTCCACCACAATCAGAAATTGTAGGTGAGAACAACGCATCCAAGAGTGCTGCTAAAGAGCAGATTCTTTCTAGTACAAATGAGAAAATGACTACTAGTGTTCCCCAGGGTGCTAGCTCCTCAAAATCACCAAAGGGTGCACAGGAGAAGGCTAGTTTTTTGGGTAAAGGTGGAGAACAACCTTTCTACCAACCCAATGTGTACGCACCTCAGCCACAAACAATCTATTCTGGAGGATACCTGAACCATTTGGGCCAATGGGAAGAATACCCCCATTATGTCAATATGGAAGGACTCCATTCTGTATCACCTGGAATTTACAACGACAACCAGTCAATCATGTTATCTCCTGGATATGCAAACAACCCTCAAATGATGTATGGAGCTTATTCTCCTGGCGTTGGAGATGGCCAGCCATACCTCCCATTGCACTTTCCCTTCTCAAGTCCTTACTACCAGCCACCAGCCTCTCCTAGCATGGGATACTCTAATTCCGCCACTGGAATGTCTCAAGGAGATCCTATGCTGCAGCAGGAGTACTTCCTTCCTGACGGCCTTCTCTACTCGCCAACACCAGGTTATCATCAACCATTCGGGTCTTTTGACAGAGCATCCACCCAACCAAGCAGCACTCCTGGTTTGTTTGGTCAAGGGAACACACCGCTGGCTTTTGGAATGCATCATGGGTCAATGTATGCCCCTGGATCCTATAAGCCACGCCAACAAGGTGGTAAGTTTGGAGGCACTACTCCAAGTTGGAGTTCTGGTCGCAGATTTGGTACTTTTGACTTAAGCGCCAATCAACAGAAAGGGAGCATGCCATTTGGTATTCAGAATGGTGCTCTTGAGTTCCTGAATGAGCAAAACCGTGGGCCACGTGCTACAAAACCAAAGAAACAAGACACAGAGAACTCTTCAATAGATGACAAAAATGAGAAAAATGTTCCTCTGGTTGATAGTGAACTGTATAATCGCCCTGATTTTGTCACTGAATACAAGGATGCAAAATTTTTTGTAATAAAGTCCTACACTGAGGACCATGTACATAGGAGCATTAAGTACAATGTTTGGGCCAGTACAGCTAGTGGGAATAGAAAGCTGGATTCTGCTTATCGCTTGGCCAAAGAAAAAGAAGACTATTGCCCTATTTTTCTATTTTTCTCGGTTAATGGCAGTGGTCAGTTCTGTGGTGTAGCTGAGATGATTGGACCCGTCGATTTTGACAAAAGTGTCGATTATTGGCAGCAGGACAAGTGGAGTGGCCAGTTCCCTGTGAAGTGGCACATTATTAAGGATGTCCCGAACAACCTGCTGCGGCACATCATTCTTGAGAACAATGACAACAAACCTGTAACTAATAGCAGGGACACCCAGGAGGTGAAGCTGGAACATGGTCTGCAGATGTTAACTATCTTCAAGAACCATGAATCGGAGACGAACATTCTTGAAGACTTTGACTTCTATGAGCAGCGGGAGAAAGCCTTGCAGGAGAATAGACGTCAGCAGCAGCCTGCCAGCCCAGAGCTGCAGAAACCAGCAGAGAATAAGGCCCTAGGAGAACTTATGGCCCACATCTCAGACACATTTGGTCAGACTGTCCAGCTAAAAGAAACTGAGAATGGCGAAAGCAAGCCTGCAGTTGAGGGTGTTTCTTCAGCTGATGAAGCGTCCACCGCAACCACCAAGGCTGAAGATGGAACGGCGAGCACGAACGCTAGCCCTGTGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAEGERHRWRRHLERESEGEGKRFQDCMIPPQSEIVGENNASKSAAKEQILSSTNEKMTTSVPQGASSSKSPKGAQEKASFLGKGGEQPFYQPNVYAPQPQTIYSGGYLNHLGQWEEYPHYVNMEGLHSVSPGIYNDNQSIMLSPGYANNPQMMYGAYSPGVGDGQPYLPLHFPFSSPYYQPPASPSMGYSNSATGMSQGDPMLQQEYFLPDGLLYSPTPGYHQPFGSFDRASTQPSSTPGLFGQGNTPLAFGMHHGSMYAPGSYKPRQQGGKFGGTTPSWSSGRRFGTFDLSANQQKGSMPFGIQNGALEFLNEQNRGPRATKPKKQDTENSSIDDKNEKNVPLVDSELYNRPDFVTEYKDAKFFVIKSYTEDHVHRSIKYNVWASTASGNRKLDSAYRLAKEKEDYCPIFLFFSVNGSGQFCGVAEMIGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNNLLRHIILENNDNKPVTNSRDTQEVKLEHGLQMLTIFKNHESETNILEDFDFYEQREKALQENRRQQQPASPELQKPAENKALGELMAHISDTFGQTVQLKETENGESKPAVEGVSSADEASTATTKAEDGTASTNASPVE</aaseq>

Gene Sequence

<dnaseqindica>1..76#2087..2157#2234..2405#2743..2819#2892..3189#3311..3378#3490..3975#4130..4342#4476..4829#ATGGCGGAGGGGGAGAGGCACCGTTGGCGCCGTCATTTAGAGAGAGAGAGTGAGGGGGAGGGGAAAAGATTTCAGGGTTAGGGTTGGGATGCTGAACTTTTATATAGATCCGGATCAATCTAGACCGTCGATCAGATCGGACGGCTGCGGCTTCTCCCACAACGGGCCACGGTTCCCAGGCCGCCTCATGGGCATGGAATAAGTTCAGTTTAGGTCCCTTAAGGTTGAGTTCTTTCCTTCTAATACTACTAAACGGTGCATTTTTTCACAAAAAATATCTATACAAAAGTTGTTTTAAAAAACACGTTTTTCGTGACAGCACTCCCTAAGAAAACGAAAATGGCTAATCTTTATCTCTACTACTTAAAAAATTTGAAAATGTTTCCGTTGTTCGTCTAAAATGAAAAAAAGAGTGAAAAAAGTCCGATTGTATATAAAAAGGGCAGAAAAAAGTCCGGAAAAAAGGTCCAATTTCTATCCGATTTCATCGTTTATATATTCTCTATCTCTAATCTAATGTAGGTTTCCGATGAAATTTCCGTCCGTCCTCAACCAATTTTTGTCCTGCAATATCCCAAGTCCAACACACAACAAATCATCCAGAGTCCGCATCAAATAACACTCCACCTTCGGTTACCCAGAAGAGAACGAACGGGAAATTTCAATTCGCGGGTTGAAGAATAAATGCTGAAATTATGTTTATATTATCAAAATTAGCAATTAAGTTCTGAAAATTTCAATAAAATTTCAAAGAGTGTAATTAATTATGAAGAATTTTAAAAAATTAAATCCAACCATATAACTTTTTTCACACTTATTTTACTTGTAAATTAATTTAATTATACACCTACCAACTTAAATAATATCCAAATTTTTAAGGAAATTTGTACTTCAATTAATTACATAATATAAGTCTTTTTTAACTTTTCCTTGATTTTCTGATCTTTACACTTCCCGTTGTAACGCACGGGTCTTTTGCTAGTATAGATAAAATAGAAAAGTAGGAGTAAGATCATCCTCAAACGTTAGAAAATTAAAAAACCGAACGGAGTAATAAGCATAATTGTATCCAAAATCATTGTTTAGCCTGGTCAAACTGGTCAAGTATCTCCCGTCCACGTTCCGCTGTTCCTGGATTTTTGACAATCTGGCCCTTTTAGAAAAAGCTTAATGTATAGATAGACCGCTGAAAGGCCTTATCCACGAAAACGAGCTTTTAGGAGGGTCTATTTACAAAATAAGTTTTCTAAAAGGGGCTAGATTGTCAAAAACCAAAGTCTTCCCGTTCCCCTCGGCGTCGACTCCCCCCCCCCCAAACTCCGTCTCCTCGCGCGAGTTCGCCCGCCGCCTGCGCCGATCTCCATCCGGCGAGGCGCCGCCGTCCGCCCGGCTGCTTCCGCCGGTAAGCTTCCATCGTCCTCTTCCTCATCTCTCTCTCTACCCACGCGCTCTTTCTGTTTTTCTCCCCTCGAATTCGCGTGAACCCTAGCTTCTGTTCTAGATCTGGGAAGGTTTTTTTTCTCTCTTAGTTTGCGTTAAATTTGGTACTAATATTGTCACATGTTTGATCCTCCCCTCCCCGCCCCTGGGAGCTAACGCGTACAGGACAGTTTGCTATCGAGGGGGGAAAAGTTGGGAGAATTAAGTAATAATTCCGTAGTTTGGAAATTTACGCCGGTAGGAGTACGAGCGGGTAGGTGGTAATTCACTAATTCTAGTGCGGTTAAAAAGGACTAAAGCGTCCTCTCGACTCTGGGTAATCGGAGGAGGTATTTGAATAGGTCGCTGCTGCTGCTGCTGCAGTGTTGATTTGAGCATGTTGGTTATGCGCTGTGTATGCAAAAGGCTGATTTGCAGTGTTGATGAAAGGACATGTGCAATTGTAAAGCGTTTATTAAATGCTTGCTCATGTAGAACGAGTTGATAGTTTTGGTGGAGTAAAAACCATAATATGCATTTATGGTTTGTAGGATATAGTTACTTTCTATATATATTTATATATCTGTGGAGTTACTTCGCTCATTTTTTAAGTTTTGATAACCGCTATGAGGATGTTACAATCTTTGTAACTCTGCTTGTTATGTAGATTGCATGATTCCACCACAATCAGAAATTGTAGGTGAGAACAACGCATCCAAGAGTGCTGCTAAAGAGCAGGTAATTGTCTTATCAGTTTTTTTTCCCTACAATAGGTGTCGCGCTATTTACTAATGGTTGATTTTCTCTGCATCAGATTCTTTCTAGTACAAATGAGAAAATGACTACTAGTGTTCCCCAGGGTGCTAGCTCCTCAAAATCACCAAAGGGTGCACAGGAGAAGGCTAGTTTTTTGGGTAAAGGTGGAGAACAACCTTTCTACCAACCCAATGTGTACGCACCTCAGCCACAAACAATCTATTCTGGAGGTTAGGTTACATTCATTTTTATGTGTTATTATTGACGATTGAACTCTGTTGGACAATTTAATCCCCAAATGTACACAACCATGGTATTAGAAGATAAAGTTTCAGATATTTAACTCTAAATTTGGTTTTCTCTGTACTAACATGATTGATTGTTGCTATCAGTTTTAAGTGTTCATCAGTCCTTACTATTTTGATCTCACTATTGTTTAACTGCCTCTATTGAAATCTTGAGAGAGAGAGGCGAACATATTATTCAATCTGCGTATCTTGTTCTTTAACAAGGTAACTCCTTTGGAAGTGTTATTATTTAATATTCTTTGCTTTTTTTCCCCTGTAGGATACCTGAACCATTTGGGCCAATGGGAAGAATACCCCCATTATGTCAATATGGAAGGACTCCATTCTGTATCACCTGTAAGTACTATGACTACTGAAGTTATTTTCCATTTTTCATAGTTTAGTTTTCTTAATCTTGTTTTGCTGAAGGGAATTTACAACGACAACCAGTCAATCATGTTATCTCCTGGATATGCAAACAACCCTCAAATGATGTATGGAGCTTATTCTCCTGGCGTTGGAGATGGCCAGCCATACCTCCCATTGCACTTTCCCTTCTCAAGTCCTTACTACCAGCCACCAGCCTCTCCTAGCATGGGATACTCTAATTCCGCCACTGGAATGTCTCAAGGAGATCCTATGCTGCAGCAGGAGTACTTCCTTCCTGACGGCCTTCTCTACTCGCCAACACCAGGTTATCATCAACCATTCGGGTCTTTTGACAGAGGTAATATTTCTCCTTTTCAATCTTTGCTGTTCTTCAAGTCGAACTTTTGATGATTGCAAGTTATTTCTGTTGTAATAATTGATTAGGCCAATGCTTAACATATCATGAATTTCTTTTGCAGCATCCACCCAACCAAGCAGCACTCCTGGTTTGTTTGGTCAAGGGAACACACCGCTGGCTTTTGGAATGGTATGCTTTCTTGCAATTGGGCTTTGGCAAATACTGGTTGAACTAAAATTGTCAGTCCTAATGTTTATTGTGCTCTTCATTGTCCAGCACTGACGGTGTATGTTTTTGCAGCATCATGGGTCAATGTATGCCCCTGGATCCTATAAGCCACGCCAACAAGGTGGTAAGTTTGGAGGCACTACTCCAAGTTGGAGTTCTGGTCGCAGATTTGGTACTTTTGACTTAAGCGCCAATCAACAGAAAGGGAGCATGCCATTTGGTATTCAGAATGGTGCTCTTGAGTTCCTGAATGAGCAAAACCGTGGGCCACGTGCTACAAAACCAAAGAAACAAGACACAGAGAACTCTTCAATAGATGACAAAAATGAGAAAAATGTTCCTCTGGTTGATAGTGAACTGTATAATCGCCCTGATTTTGTCACTGAATACAAGGATGCAAAATTTTTTGTAATAAAGTCCTACACTGAGGACCATGTACATAGGAGCATTAAGTACAATGTTTGGGCCAGTACAGCTAGTGGGAATAGAAAGCTGGATTCTGCTTATCGCTTGGCCAAAGAAAAAGAAGACTATTGCCCTATTTTTCTATTTTTCTCGGTAAGACAAGCCCCTCTTTTTTTATTATTTTATTCTCTGTACTACGGGAAAAAGCAAGTAACAAAAAGCTGATTTTCTATAAGACTACTTTTGATCTATGTCCTGATTTTTTAAAGATTTTATTTAAATTGATCCATAACCTCGTTTTTTGCAGGTTAATGGCAGTGGTCAGTTCTGTGGTGTAGCTGAGATGATTGGACCCGTCGATTTTGACAAAAGTGTCGATTATTGGCAGCAGGACAAGTGGAGTGGCCAGTTCCCTGTGAAGTGGCACATTATTAAGGATGTCCCGAACAACCTGCTGCGGCACATCATTCTTGAGAACAATGACAACAAACCTGTAACTAATAGCAGGGACACCCAGGAGGTAAAAAAGCTGTCTTTTTGCCAGCTTCTGTTGATTTAATCCTAATCTTTCCGTAGAGATCTCTGCTTTTCTGAAACATCTAGTGAATGTAGCTTTTTCTGAAAATGGCTAACTTGAGAGACAAAACATGCAGGTGAAGCTGGAACATGGTCTGCAGATGTTAACTATCTTCAAGAACCATGAATCGGAGACGAACATTCTTGAAGACTTTGACTTCTATGAGCAGCGGGAGAAAGCCTTGCAGGAGAATAGACGTCAGCAGCAGCCTGCCAGCCCAGAGCTGCAGAAACCAGCAGAGAATAAGGCCCTAGGAGAACTTATGGCCCACATCTCAGACACATTTGGTCAGACTGTCCAGCTAAAAGAAACTGAGAATGGCGAAAGCAAGCCTGCAGTTGAGGGTGTTTCTTCAGCTGATGAAGCGTCCACCGCAACCACCAAGGCTGAAGATGGAACGGCGAGCACGAACGCTAGCCCTGTGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027440