Os09g0314500

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0314500| Description = Ataxin-2, C-terminal domain containing protein| Version = NM_001069376.2 GI:297609206 GeneID:4346693| Length = 5295 ...")
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Gene Name

Os09g0314500

Description

Ataxin-2, C-terminal domain containing protein

Version

NM_001069376.2 GI:297609206 GeneID:4346693

Length

5295 bp

Definition

Oryza sativa Japonica Group Os09g0314500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9179114..9184408

Sequence Coding Region

9179232..9179690

Expression

GEO Profiles:Os09g0314500

Genome Context

<gbrowseImage1> name=NC_008402:9179114..9184408 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9179114..9184408 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtgatgggagcggaggaggcgaggacttcgagggtggtggtggcggcggcggggcgcagcctcaacccgaacgcgaaggagttcgtgccgcggtggcaccgccacgccgccgccgccgacgacgacgacgccgccaggaggacgaagctctccgcggacgcgccggagttcgtctacgaggggttctggcgaggcgttgatggtctcaccggctacggctacggctacggcgacggccacgacggcgcgccggaggagctcgtcgtcgtcgtctcggagcgcctcaacccggacgcgccggagttcaccgccgccgcctcgatccgccggagaagatcgccggggagcgggaatggcatctcctccacccgccactggagtgtaagcaagagccgcttcttgcactccgtaatttcttccttcgatctctttcagatcacaaatcgtcgatga</cdnaseq>

Protein Sequence

<aaseq>MEVMGAEEARTSRVVVAAAGRSLNPNAKEFVPRWHRHAAAADDD DAARRTKLSADAPEFVYEGFWRGVDGLTGYGYGYGDGHDGAPEELVVVVSERLNPDAP EFTAAASIRRRRSPGSGNGISSTRHWSVSKSRFLHSVISSFDLFQITNRR</aaseq>

Gene Sequence

<dnaseqindica>119..577#gtgccaaatctaccaactcttctcccctccccctcctcgcgatctcgcgctctcgacctcgtcgccgccgccgatcgccgccgccgcagccgcagccggacggagagtcggagaccgtatggaggtgatgggagcggaggaggcgaggacttcgagggtggtggtggcggcggcggggcgcagcctcaacccgaacgcgaaggagttcgtgccgcggtggcaccgccacgccgccgccgccgacgacgacgacgccgccaggaggacgaagctctccgcggacgcgccggagttcgtctacgaggggttctggcgaggcgttgatggtctcaccggctacggctacggctacggcgacggccacgacggcgcgccggaggagctcgtcgtcgtcgtctcggagcgcctcaacccggacgcgccggagttcaccgccgccgcctcgatccgccggagaagatcgccggggagcgggaatggcatctcctccacccgccactggagtgtaagcaagagccgcttcttgcactccgtaatttcttccttcgatctctttcagatcacaaatcgtcgatgaaacttgattttggtttcgatttcgatttctcgtttcaatcgtgttcgtatgattttgatttcgatttcgatttcgattatttctcgtttcaatcttgttcgtggcgtcttggtttacagttttttgggtttacgctttccttttcgggtggcggtagttgcatgtgttgaaaatcagggcgaagaggcgcagatcggtgggggagggggtttatgtttttggtatagggatagcgtcagatcgaggtggttgcttatttactgtgagctgcaagaaagacaagagggagttgttgcatgctttgagtgtctctctctttgtacatttgaatacaaggagggtttatcatctattattgaagacaagaaaaggaaaattctatgcatacgtactaaattttgttttactaaactcttactaacatcaacgtgttacgctgtgagtatatctagattttctataacttccatctatctaacttgaacggttgagatcattttttgtaagagttttgtaaaagaaaattaatacgtgtagcaatactcaaaagaaaactagtgagactgagagaacctgcccgagaggactaggatacatggcacctctatatattattaatagaaaagaaagctttgagagaatttgtgttggacacatggcacctctctatatattattaatagaaaagaaggcttttgagagaatctgtgttcgagaggactcgttctcttgagtacttctctcttgttggtgattattattcattccatgatatatatatatatatatatatatatatatatatatatataaagagacagagatatcatgcattttttttctagggttcaatttttaggggagatagatccatgtttgggggcatgatctgtgatattatctggtttgatgtgacggtcacatgaaagaaactacttcaatctttagatgcttgatttgattttggttcttcaggcagggtggaaactgaaatagtctttccccttggtttgggactttttcttctttgtcttaattagatcttttcctatttagtccgtttccacttttggttcgtcctttttccccctcttttggccatgaatagctactttcctaaagttccatggatgcatacatggtgcatatatatgtcactaatgctctctctctctctcactatgatctactatatactccctctattttttaatagatgacgccattgactttttctcacatgtttaaccattcgtcttattcaaaaaatttacgtaattataatttattttgctatgagttgttttatcactcatagtcaaacatgtgagaaaaaatcaacggcgtcatctattaaaaaacggaggcagtattatattacggtgccatcatatatattccatcttagacaaattcctaaaattttgaggtccctaattaattaattcctatctactgactacatttttacagaggaggggtagtagaaacttctccagacaaggaagatcagccccgttttcttctagggtgcgaagggcccagaaggaagagtttgtgagaagaacaatatttgtcagtgatatagaccatactgtaagatactgatatttccatggattgcaatgcgatgaattttattttctatggcttgcatatatggagtaatttgtcacatccaaatataatgtgtgacacttcatttgtttctgaaagataataatggtatgcatttgtgtgtttcaggttactgaggacatgttagctgaactgttcgggagctattgcagcgtacgcctcttccttcccatgtgtatatatatgtgcctgagtaaacatttttttagctccactattttttttatccttttctttttgcgaaacacagtgtagatgcaagcgtttatataaacacgcgcacacttagcttcactagttttctaggtatataactgtgatatgtatggtgattgagtaagactgctttcgatatatatgaaaaacttttgatattgtgatatatatcattcatatgcatatgtatatagtaaccaaagcatcatcatttgcaagtgccaagcacaattatgttcatgtgacgcactaatttcttttttatcctttgaaaggcttgaatcaggtggtggaacgtactctttagaagtatgtatatgccagtttgtaaaattttatggacatgcatgtttacttcagaagatttttgtttataacagggtcctcttaattatttggttctagctagtaaagatagtgttttcataaagttagattttaagtgaaacgaataatcgcttcgtgctatgctgggagcaatctaaaataacatgattttctctagtttgtaatgtcctaaacgccttaaaattcgttgctctagtttaatttgtccatatgttgcaacaggtggtggtggattgccgcatctgtggagatcactcatctggccttaggtttgcatttattgaatttcaagatgagagtaagtggcacatttcaaacctgaatcttgtttttcatcaatacaagtgagaggttcatacaaatataatctggagatataacatggaagccccctttttttttcaggtgatgcttatgctgcattggatcttgatgggtatgttcttggcatttgccctcttagggtttcaccttccaagactgcaatcatgcctgtgaacccttcttttcttcctcaggtcagtacagcccaaggaaccatgttattgccatgatttataatcaagatagatcatcccattttcaacatgttgtgtactcactcttaaattaatttgttcggtagtctgaagctgagagggagatgtgctcaagaacaatctattgcacaaacatcgacaagagtgtatgcgaaaccttaatcctccttgagaaaaaattctccaataattaagcagttgtctccaatgttaataattaagttccttgttaacttttataggtcaatgtaacagatttgaaatacttctgcgaggaacactttggtcaggttagaatataatcatctcatgaattgatattcctcttcattaattatttttcagcagcacacactgtatatatttgagatttattctggtccaacaaaaaatacctcgagatatcggcacctcatagtaccaaatcgtttttaatcgttggatctacctggataggattggcattgttggactggagcaaatctcatatatatttatctgaattttttgtaccgtaatatatttatctgaattatctcgctttcttccatttcatggattatatgcaggttttccgcctaaaactgttaggtgatgatggtcaccccacccgcatagcttttattgagtttgctgaggtgactctctcaaatatgtcagttctcaatgcagtaattttcgcacattggttggcttgaatttaagtatagtagatggtgtaggagcaatgtaataataaacatcctcattaatttcctcatcctaataagcaagctgttcttcttaatgatcgataatcgatcactagctcttggtttagatcgtcctagcttacagcccatttatatgcatatatgtaaatgccatgcacatacactcgaataattaagattctgtacttctattgctcatcattacttagttctaaaaagaaatatcaacaaaaggtatactagatagcttgattatgctaactagtactagaataaccgtcagacctgtaatttataatttgttcattcaatggcattttaattaagacctacatctcattccttagatatatagtataacatggaattcagaatatacataaatatgaaatctccatataacacataaacttttcatgtattctttaatttgaaacaagagggtgcgagtgagtgtttttggctatgtgcactgtgtagttatgcagaggctgggagtgtacgcacttagtagagttgtatatatcttctcaattgtataattggttagttcaataaaaaacttatattatctaaaaatattttcaggttgatggtgctattaacgccctgaactccagtggcatatttgcaagtggccagcctatcaggttcaataatccttactataccggataaaattttacatgcacatatcactatgcatgtccatgtaaacaaccttttgtttgtgatctactttcagggtgtgcccttcaaagacgccgatcaggagcgtcgcgtcctactactccacatcagctaataccatgacatcgaactgaccgtcatctggcgtgtctccattgccgttcaattgatcgacatcgcctggagatatctgctacatatatatatatatatatatatatatttatttatttatcagttcatcatatgctgcagtactgcatgtatggtgttgcttcagctagttgtagtttcgatccctgttgagtttctccttcaaagaacctgcatactgtgaatctgtgatcgaccggcctgaagacagacagctgaaatggattgatttcttacttgtccctggtcatgtatgtgcatgtgtgatgaggagattgcttggttgtagtgtacctgagactgtatccattgttaattcctccagagagttgtgttttctgttgtctcagctgtgtaccaaatatttatacttggtcggctttaatttcttaattagtctctttattgatagcttggcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0314500, RefSeq:Os09g0314500