BGIOSGA027482

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Revision as of 07:43, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027482| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027482, complete gene.| tag = OsI_281...")
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Gene Name

BGIOSGA027482

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027482, complete gene.

LocusTag

OsI_28176

Ensembl Transcript ID

BGIOSGA027482-TA

Ensembl Protein ID

BGIOSGA027482-PA

Length

3260

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6176006..6179265

Sequence Coding Region

6179242..6179265,6178035..6178535),complement(6177876..6177951,6177712..6177845),complement(6177359..6177640
,6177204..6177259),complement(6176724..6176814,6176006..6176137

Genome Context

<gbrowseImage1> name=IndicaChromosome08:6176006..6179265 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:6176006..6179265 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCTTTGATAATTTTGTTCAGATAACCGGTGATGCTAGAGCTGTCAGAAAGGCACTATTTGCAGTATCAACCATCATTTACAAGTGCCCATCAAAAGAGACCATTCCTCTTGAAACTTCTGTTTCAGACCTTCCTCCAAGCATTATAGTTCCTTCTGAGCTTCCTGTTTACCCATCTAGTAACTTCTACTCACCCTCTGATGCTGCCATATCTTCTGGACATCCAAGTCTATCAATCTTAGGGTCAACACCTCATGTTCCTGAACTTACAGTATCGGCTGATGCTCATAGTCGACTGCCCATTTACCAATCTGTGCTTCCTGTAATTCCTGCTTATAATACACCGAAATGTTCTGGGGAGCTAGTATTGCGTGTTTTATGCCCTGCTGGCAAGATTGGGTTGGTTATTGGTAAAGGTGGGGTGACCATAAAGAGTATAAGGAAAGAGAGTGGTGCAAGGATAGATGTTGATGACTCAAAAAATGACCGAGAGGAAAGTATAATCACCATTACATCCAATGAGGCCACCGATGATGCTAAGTCTGCAGCAGTGGAAGCTGTTCTGCTTCTGCAATCGAAGATCAATGATGACAATGAAGGTAAGGTAATAGGCTGTCTTATTGGCAAGGGCGGTTCGATTGTCAATGACATGCGGAGTAAGACTAAGGCAGCTATCTACATATCAAAGGGTGAAAAACCACGGAAGGCATCTTCCAGTGATGAGCTTGTCGAGGTGTTTGGAGAAGTGGAAAATCTGCGTGATGCTCTTGTACAGATAGTTTTAAGACTCAGGGATGATGTTTTGAGGGACAGTGTGGACAGGCAAAATTCTGAGAAAGATGGGAAGCTAACTGTTGCCACTACTGATCCTTTGTATGCAAGCAGTTATCCTTTGCCTGCATTATTACCTTACAGACAACAGATCACTCCCCTGGGCTATGATCATAGGGGTGACATAGAACGTGGTTTGGAAGTATATCCGCATAGCAGTTTGTATGGGTACAGCTCCTTGCAGGCTATAGATGATGGCTATTCAGCAGTCTCGTCATATGCATCAAAGGGATATGGAGGACGTCCTCCACATATGGAAATGACTATTCCTGCTAGTGGCCTGTCAAAAGTAATGGGGAAACATGGCACAAACCTGGACAACATTATAAAGATTTCTGGAGCTCACATTGAAATTATTGAATCAAAATCGTCTCGTCATGGCCATGTTGCTCGCATATCTGGCACCACTGAACAGAAGCAATCGGCAGAGAATTTGATCAAAGCTTTCATTATGTCTACTTAA</cdnaseq>

Protein Sequence

<aaseq>MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNFYSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPKCSGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDAKSAAVEAVLLLQSKINDDNEGKVIGCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQITPLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFIMST</aaseq>

Gene Sequence

<dnaseqindica>1..24#731..1231#1315..1390#1421..1554#1626..1907#2007..2062#2452..2542#3129..3260#ATGAGCTTTGATAATTTTGTTCAGGTAATTTCTCACATCTTTTACTTTTCTTAATTTAAATCATTTGCCAACATAATAGGAGATTAACAATTATTGAACAGTTTGAGGATATTGAGCAGCATATTTGCCGTAATTTCCTTGACTTTCATACGACTTGTAATAATATCATCATATATATTCTTTGTTTGTGAGTGACCATGCATTATGGCATTTGCCAAACAAATATGCTATAAATTGTAAATTTTAAAAATGTAAAACTTAGTTACGCTCGAACATGAAATTGTATACATCATTGCATAAGATCAATTAGCCACCTACGTATAGACATTTGCGAGGAATCCATTTTTTAAAGAAAAGATCCTGCAAACAATATACATGCCTAAGTTTATTCAGAGCCATATAACTTATGGAGTGAGAGGATTGGTGTAAAGCTTGCAGTCACCACCAACACATATAAAAAGAATAAAGATCTTATTAGTTACAACATGCCAGTACAATATTTTGAATACCTACAATCTGTTCAGTAAATGCAGCTCTGAAGCTAAATGCCTTTCTATCAGATTTTGTTCTTTATTTGTTTATCATACTTTGTGTTGTACACACCTTTATACTGTATCATGCTTAACAATTTGTAACCACTCTTTTTAAGTTCCACTTTCTGCAATATCCATGATGTGTTTCCATATATATGTTCTTTAATTGCTATGTGTAATGTATATATGCTAAACAGATAACCGGTGATGCTAGAGCTGTCAGAAAGGCACTATTTGCAGTATCAACCATCATTTACAAGTGCCCATCAAAAGAGACCATTCCTCTTGAAACTTCTGTTTCAGACCTTCCTCCAAGCATTATAGTTCCTTCTGAGCTTCCTGTTTACCCATCTAGTAACTTCTACTCACCCTCTGATGCTGCCATATCTTCTGGACATCCAAGTCTATCAATCTTAGGGTCAACACCTCATGTTCCTGAACTTACAGTATCGGCTGATGCTCATAGTCGACTGCCCATTTACCAATCTGTGCTTCCTGTAATTCCTGCTTATAATACACCGAAATGTTCTGGGGAGCTAGTATTGCGTGTTTTATGCCCTGCTGGCAAGATTGGGTTGGTTATTGGTAAAGGTGGGGTGACCATAAAGAGTATAAGGAAAGAGAGTGGTGCAAGGATAGATGTTGATGACTCAAAAAATGACCGAGAGGAAAGTATAATCACCATTACATCCAATGAGGTTAGATCACGCTTCCTTCTAAAGTTATGTTGGTTCTGCCCTACAGTGTGGTGTTTTATTTGGGGTGTTACCTTCTGTTTCAGGCCACCGATGATGCTAAGTCTGCAGCAGTGGAAGCTGTTCTGCTTCTGCAATCGAAGATCAATGATGACAATGAAGGTAAAATGAATCTTCGCCTTCTTGTTCCAGGTAAGGTAATAGGCTGTCTTATTGGCAAGGGCGGTTCGATTGTCAATGACATGCGGAGTAAGACTAAGGCAGCTATCTACATATCAAAGGGTGAAAAACCACGGAAGGCATCTTCCAGTGATGAGCTTGTCGAGGTATCTCATTTTACCATTTAAAAAGAGTCTGTTACTGTGATAGCTTGGGTCTAAATTGTCATTGCATGTAGGTGTTTGGAGAAGTGGAAAATCTGCGTGATGCTCTTGTACAGATAGTTTTAAGACTCAGGGATGATGTTTTGAGGGACAGTGTGGACAGGCAAAATTCTGAGAAAGATGGGAAGCTAACTGTTGCCACTACTGATCCTTTGTATGCAAGCAGTTATCCTTTGCCTGCATTATTACCTTACAGACAACAGATCACTCCCCTGGGCTATGATCATAGGGGTGACATAGAACGTGGTTTGGAAGTATATCCGCATAGCAGTTTGTATGGGTACAGCTCCTTGCAGGTACACCATTTTAGTTTAACTTCAATTATACTTGTTTCTCCTTTAATCTTTATATTGAATTTTGTGATATCAGCTTAGCCAATGATAATTTTCCATCAGGCTATAGATGATGGCTATTCAGCAGTCTCGTCATATGCATCAAAGGGATATGGAGGGTATGTTGGAACAGAACTTCCCATGAACCCTGATCTCAAGTACTGCTTATTCTTCCATTTAATAATTCGTTTTAATTATTACTCCCTCCGTCCCAAATTATAGGGTGCCCCTTTTTAAGTAAAATCAAACTCGGTATCTTTTGACTAATAATCATACTAGCTATATCTATACTAAATATTATGCGTGTTATATCACTTCATATTTTGAAGTACTTTCATGTGTTGCTAATTTCATATTTGTTGGGATCATATAATGAAATAAAATACTGGTTAAAGTATGTTATTGAAGACCATGCAAAAAAATATAGGCCTTATAATTTGGGACAGAGGGAGCACTTGGTATCTGATCCTTCCTGTTTTAATCCTCTTCGCTAACTACCATTGGTCAGACGTCCTCCACATATGGAAATGACTATTCCTGCTAGTGGCCTGTCAAAAGTAATGGGGAAACATGGCACAAACCTGGACAACATTATAAAGGTTAGTTTGCCATTCATATTGGTGCTATCTTTCCTTTTGCAACATAAATGAACCCCTCGTTTTGAATGTACTCCCTCTTTCCACTAATATATGATGTTGGTTAGTTCACGTTATACATTAATGGAAGGAGGGAGTAATAACTTTTACTTTGTTCTATATTTGATATGGATTCAGCGTCTAGAGAAAGGGGTAGATTTTAAAAAATGGTGACAAGCACAAACGCTTATATTGCTTCTTTTTATCTCGTCTATTAGTGAGTTGAATACTATATTAATTTTCTTAAATGAATATATGTTCCATTTTCCAGTACTCAACACAAGTTGATTTTTTTGCTTGTTTTATTAAAATGATTAGAATGCATCGTATGATGTGTGCTTATACAATTGCTAGACTGCACTCATTTAAGTGGACTTTGTAGGAAAGGAGATAATCTGTTAGCGGGATTAACAGGACAAAAATTATGAAAGTGCAATTGGTATATCTGACATCTTCAGTGGGTTTATAAATTTAGGGGAATAAAGCCTTATAGGTAGCCTATTGTTTTCTCTCCTTTGCATCAATGTTTAATTTTTTAGTACCATTGCAGATTTCTGGAGCTCACATTGAAATTATTGAATCAAAATCGTCTCGTCATGGCCATGTTGCTCGCATATCTGGCACCACTGAACAGAAGCAATCGGCAGAGAATTTGATCAAAGCTTTCATTATGTCTACTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027482

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027482&oldid=33739"