Os11g0141900

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Revision as of 09:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0141900| Description = BTB domain containing protein| Version = NM_001072249.1 GI:115484110 GeneID:4349742| Length = 2453 bp| Definition =...")
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Gene Name

Os11g0141900

Description

BTB domain containing protein

Version

NM_001072249.1 GI:115484110 GeneID:4349742

Length

2453 bp

Definition

Oryza sativa Japonica Group Os11g0141900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1933612..1936064

Sequence Coding Region

1933612..1934139,1935108..1936064

Expression

GEO Profiles:Os11g0141900

Genome Context

<gbrowseImage1> name=NC_008404:1933612..1936064 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1933612..1936064 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctccgaggactcgctcaaatccttgtcgcttgactacctcagcctgctcatcaatggccaggccttcagcgacgtcgccttcagcgtcgagggccgcctcgtgcacgcccaccgctgcgtgctggcggcgcggagcttgttcttcaggaagttgttctgcgggctcgatccgaatcaccagccgccgccgccaccgccgccgttaaactggccgatggcggggggaggcggcggcggctctggtggtggagggcgtggcggcgccggtggtggtggaggagcgcctgccacgccggagcttgtcatccccgtcagctcgatccggtacgaggtgctcgtgctcgtgctgcagttcctgtacagcgggcaggcgtcggtggcggcgcccaagagcgggccgctcccggggtgcggcgcccggggttgctggcacacgcggtgcggcgccgccgtcgacctcgccctcgacacgctcgccgctgcgcgctccttcggcgtcgagcagctcgccctgctggttcagaagcagctggagagcatggtgaaggaggcgtcggtggacgacgtgatgaaggtgctgatggcgtcgcgcaagttcgagatgcaggagctgtgggcgacttgctcccacctcgtcgcgcgctccggcctctccgccgatctcctcgccaagcacctccccatcgatgtggtcgccaagatcgaggagatccgcgccaagtcgccgctcgccgcggtggccgcgccgcgctcgccgttcctgacgcaccactacctccccatgaacccggcgtcctccgcggcggaccgcgacaacaagatccggcgcatgcggcgcgccctcgacgccgccgacatcgagctcgtcaaactgatggtcatgggcgagggcctggacctcgacgacgcgctcgccgtccactacgccgtgcagcactgcaaccgcgacgtcgtcaaggcgctgctcgagctcggcgccgccgacgtcaactcccgcgccggcccgacaggcaaaaccgccctgcacctggcggcggagatggtctccccggacatggtgtccgtgctgctcgaccaccacgccgacccgaactccaggacgctcgacggcgtcacgccgctcgacgtgctccgcagcctcacctccgagttcctcttcaagggcgccgtgccggggctgacgcacatcgagcccaacaagctcaggctctgcctcgagctcgtgcagtcggcggtgatggtgaccacgcgtgacgacggcgcgcctgtcaccggcggcgccgaggccggcggaagcgacggcggcaacttcccgaggagcgacgccgacgacagcttggtgagcctgacgatgaactcgacgctcatgtaccagggccaggaaatggcggcggccgtggccgccggcgaggggaggaaaagcaataacggccgagggagcccgccgcccgccatgtacttccccaatggcttcgcataa</cdnaseq>

Protein Sequence

<aaseq>MSSEDSLKSLSLDYLSLLINGQAFSDVAFSVEGRLVHAHRCVLA ARSLFFRKLFCGLDPNHQPPPPPPPLNWPMAGGGGGGSGGGGRGGAGGGGGAPATPEL VIPVSSIRYEVLVLVLQFLYSGQASVAAPKSGPLPGCGARGCWHTRCGAAVDLALDTL AAARSFGVEQLALLVQKQLESMVKEASVDDVMKVLMASRKFEMQELWATCSHLVARSG LSADLLAKHLPIDVVAKIEEIRAKSPLAAVAAPRSPFLTHHYLPMNPASSAADRDNKI RRMRRALDAADIELVKLMVMGEGLDLDDALAVHYAVQHCNRDVVKALLELGAADVNSR AGPTGKTALHLAAEMVSPDMVSVLLDHHADPNSRTLDGVTPLDVLRSLTSEFLFKGAV PGLTHIEPNKLRLCLELVQSAVMVTTRDDGAPVTGGAEAGGSDGGNFPRSDADDSLVS LTMNSTLMYQGQEMAAAVAAGEGRKSNNGRGSPPPAMYFPNGFA</aaseq>

Gene Sequence

<dnaseqindica>1..528#1497..2453#atgagctccgaggactcgctcaaatccttgtcgcttgactacctcagcctgctcatcaatggccaggccttcagcgacgtcgccttcagcgtcgagggccgcctcgtgcacgcccaccgctgcgtgctggcggcgcggagcttgttcttcaggaagttgttctgcgggctcgatccgaatcaccagccgccgccgccaccgccgccgttaaactggccgatggcggggggaggcggcggcggctctggtggtggagggcgtggcggcgccggtggtggtggaggagcgcctgccacgccggagcttgtcatccccgtcagctcgatccggtacgaggtgctcgtgctcgtgctgcagttcctgtacagcgggcaggcgtcggtggcggcgcccaagagcgggccgctcccggggtgcggcgcccggggttgctggcacacgcggtgcggcgccgccgtcgacctcgccctcgacacgctcgccgctgcgcgctccttcggcgtcgagcagctcgccctgctggttcaggtactgcgcggaaaattcaggaacacgacgtagtatatacgcgtcatgcatcctgcagctgcaaataatttgaaattcctcttccatgtgcttgcaattcgatcttgggatctgctgctaacactgggtattgattaagagtacatgatggtagttaggctggcatgattggagcatctttttggtgacattaaggagtcagcagaagcaatgttcaagtctgagctgatcctgctgcatgcttgcctagatccctaggttgcatgccccctttgcctttttttccgattactgagcgagctgagctgcacgattcatgcactactgctctcaactgtggcatctgatccatgcgcagtagctgcagcagaatctagtgcatgccctcacttcattcatcgcaattttttaacattttttcttgtgttcttttttttttcgggagtgagatagatggggtatagtgtactaataggactgagtcgtctctagtctcgattgcttttctgctgcttcgcccttgctgcttctgtcatcacttgtcatggagcttctaactcatctttactaggaagggtcttttcaagctcttgttgtgtctgtcccttccttacatcacatccatccccatgcttgctttcctgatttcttaattcgcatcatttcggcatttccattgctagggtttcttggagatccaacccggggtggccacttcgatcctaactagcatcatttccaaaaataattcttagtgtacagcatgcatgctgtgttctaagcaaagtacagttaagctcatcatacatttttgcatatctctctgaacagaactgaagaaagtactactactacatgctaagaacaacatttcatgctgctaattagctgtcgtgcatttgagggtgattaattaagcatcttaattgaactaatggcgagttgcacaatgcaatgtgttaatgcagaagcagctggagagcatggtgaaggaggcgtcggtggacgacgtgatgaaggtgctgatggcgtcgcgcaagttcgagatgcaggagctgtgggcgacttgctcccacctcgtcgcgcgctccggcctctccgccgatctcctcgccaagcacctccccatcgatgtggtcgccaagatcgaggagatccgcgccaagtcgccgctcgccgcggtggccgcgccgcgctcgccgttcctgacgcaccactacctccccatgaacccggcgtcctccgcggcggaccgcgacaacaagatccggcgcatgcggcgcgccctcgacgccgccgacatcgagctcgtcaaactgatggtcatgggcgagggcctggacctcgacgacgcgctcgccgtccactacgccgtgcagcactgcaaccgcgacgtcgtcaaggcgctgctcgagctcggcgccgccgacgtcaactcccgcgccggcccgacaggcaaaaccgccctgcacctggcggcggagatggtctccccggacatggtgtccgtgctgctcgaccaccacgccgacccgaactccaggacgctcgacggcgtcacgccgctcgacgtgctccgcagcctcacctccgagttcctcttcaagggcgccgtgccggggctgacgcacatcgagcccaacaagctcaggctctgcctcgagctcgtgcagtcggcggtgatggtgaccacgcgtgacgacggcgcgcctgtcaccggcggcgccgaggccggcggaagcgacggcggcaacttcccgaggagcgacgccgacgacagcttggtgagcctgacgatgaactcgacgctcatgtaccagggccaggaaatggcggcggccgtggccgccggcgaggggaggaaaagcaataacggccgagggagcccgccgcccgccatgtacttccccaatggcttcgcataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0141900, RefSeq:Os11g0141900