BGIOSGA027516

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Revision as of 07:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027516| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027516, complete gene.| tag = OsI_281...")
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Gene Name

BGIOSGA027516

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027516, complete gene.

LocusTag

OsI_28112

Ensembl Transcript ID

BGIOSGA027516-TA

Ensembl Protein ID

BGIOSGA027516-PA

Length

3161

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5663238..5666398

Sequence Coding Region

5666328..5666398,5666155..5666224),complement(5665830..5665901,5665661..5665704),complement(5665309..5665576
,5665052..5665130),complement(5664516..5664635,5664303..5664371),complement(5664124..5664166
,5663576..5663641),complement(5663238..5663433

Genome Context

<gbrowseImage1> name=IndicaChromosome08:5663238..5666398 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:5663238..5666398 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACCTCGCCGACGAGGATCCGCCCGTCCTCCTCGACCGCGCCTCTCGTGCCACCCGTGGGAAGAGGATAACCAAGCTCCTCGAAGATGAGGTTGAGCAGGACGAGGTCTTCTGGAATCAGGACGCCCTCAAGGAGGATGAAGAAGATGACAACTACGAGGAAGAGCAGGATGCTGGTGATGAATTCGACAGTGATTTTGGTGAAGATGAGTCGGAACCTGATGATGAACCGGAAAAGGAAGTACGTGAGAGATTACCTATCAAAAAGCGACTCATATTCCCTGGGAAGACTATGAAAAAAATCAATGCCAAGAAGAAGAAGAAGGTGGTCCCAAAGCTGGAAGATGATTCCAAAACTGACAAGTATTCAGATCAGCAAAGTCCATCTAAGCAAACAGACATTCCTGATGAACTGGAGACCGGTGAAAAGACCATCAGGAAATCAACTAGAACATCTGTCATCGTCAGACAAGCTGAGAGGGAGGCAATACGTGCTGAGAAAGAAGCAACGATGAAGGTTCCTGTTATTAAGAAGAAAAAGGAGGGAGAAGAAAAGCGTATGACACAAGAAGAGATGCTGTTGGAAGCAGCTGAAACAGAGATCATCAACCTGAGAAATCTTGAACGTGTATTGGCAAGAGAGGAGGAGGTTAAGAAAAAAGCCGTTGTTCATAAAGCTGTTTATGAGGGTCCTACGATTCGGTTTTGCTCAAGAGATGGGGAGTCACGCTTGGAATTCATCAACGGGGCATCATTTGGGTCAGAACTTTGTACAACCTCAGCTCCTTATCCAGAGAAATCTATTTGTGCTGTAACTGGACTTCCTGCCAAATACCGTGACCCAAAGACGGGGTTGCCATATGCAACAAAGGAAGCATTTAAAATCATCCGAGAAAGTTTCCTGAAAGAGGAGGCTGACAGGAAGAGGCCCAACTTGGCGAATATGGGAGAGCTCTTTGAATCAATAACAGGAGAATACTCCACACCCAAGAAGAGAAGAATTGAGGCAAGATCACCCAGCATCTCATCAGACCAAAGGCATGGAGGACGCTTTCGACGAATACCTGCTCTTGATTTGCTGGACGAGGACTGA</cdnaseq>

Protein Sequence

<aaseq>MADLADEDPPVLLDRASRATRGKRITKLLEDEVEQDEVFWNQDALKEDEEDDNYEEEQDAGDEFDSDFGEDESEPDDEPEKEVRERLPIKKRLIFPGKTMKKINAKKKKKVVPKLEDDSKTDKYSDQQSPSKQTDIPDELETGEKTIRKSTRTSVIVRQAEREAIRAEKEATMKVPVIKKKKEGEEKRMTQEEMLLEAAETEIINLRNLERVLAREEEVKKKAVVHKAVYEGPTIRFCSRDGESRLEFINGASFGSELCTTSAPYPEKSICAVTGLPAKYRDPKTGLPYATKEAFKIIRESFLKEEADRKRPNLANMGELFESITGEYSTPKKRRIEARSPSISSDQRHGGRFRRIPALDLLDED</aaseq>

Gene Sequence

<dnaseqindica>1..71#175..244#498..569#695..738#823..1090#1269..1347#1764..1883#2028..2096#2233..2275#2758..2823#2966..3161#ATGGCCGACCTCGCCGACGAGGATCCGCCCGTCCTCCTCGACCGCGCCTCTCGTGCCACCCGTGGGAAGAGGTGCGCGCTTCCCTCCCCCTCATCCTCTATGGCTCGCTCTATCCCTTTGGCTGCAATACCTAGTTCGCCCGCCGCTCAATTCAATTCTGTCATCGTTTCCTAGGATAACCAAGCTCCTCGAAGATGAGGTTGAGCAGGACGAGGTCTTCTGGAATCAGGACGCCCTCAAGGAGGTTCTCTTCTCACTCTCTTCCTTCCCGCATTCTGCTGCTTTTCTTCTTATCATTTCTTGATTTCTTTTAGCGGGTCTTGGATCTTGTTTTAGTGTGCTCGGGACAGATAATTAGAATAGCTTCCGTTGTTGTTGAGTTCGCCATTTAGTTAATTAATTGTGCGACTTGCGTCAATGCTGTTGGTTGCTGCAATTGCTTGGTTAAGCAGGATGACAAATACTATTCTTCATTGTTTGCTCATATTTATTACCAGGATGAAGAAGATGACAACTACGAGGAAGAGCAGGATGCTGGTGATGAATTCGACAGTGATTTTGGTGAAGATGTGAGTGAGATCCCTCTTCATGCTGCTCCTAATCATTTTAGCTTTCACCGGTGTGCTGCTCTTCTGCTTCTACTTACTAAGCACTGCACATAGTTGTTTGATGTAACTCCTTTGGATTCATCCAGGAGTCGGAACCTGATGATGAACCGGAAAAGGAAGTACGTGAGAGGTAGGTACATGTGTTTGTTGAGAGCAAGTCACAATATGGTGTATATTAGTTCTACACTCATGTCACAACTCAATCATGAAGCAGATTACCTATCAAAAAGCGACTCATATTCCCTGGGAAGACTATGAAAAAAATCAATGCCAAGAAGAAGAAGAAGGTGGTCCCAAAGCTGGAAGATGATTCCAAAACTGACAAGTATTCAGATCAGCAAAGTCCATCTAAGCAAACAGACATTCCTGATGAACTGGAGACCGGTGAAAAGACCATCAGGAAATCAACTAGAACATCTGTCATCGTCAGACAAGCTGAGAGGGAGGCAATACGTGCTGAGAAAGAAGCAACGATGAAGGTTGTATGCCCACATTGAGTCCTTAGCTTCTTTGTATCAAATTTTGTTGTTAGTGCATTGTGGCTGCCCATGGGCCAGGCAAAAGAATATTGTGTTACTCATATATTAGTTTTTCAATCCATGGCATTTTTCCATTTTGAGGGTTTAATTTGCTCACTTTTCATCTTGTAAATGGCTTCAGCCTGTTATTAAGAAGAAAAAGGAGGGAGAAGAAAAGCGTATGACACAAGAAGAGATGCTGTTGGAAGCAGCTGAAACAGGTATGTTTTTTGTTTTTATAAACCTTTTCCAGTTTTCACAAGAAGAGATGATGCAGGCCTTGAATGAAATGCGATCGCCTAGTTTGCTACCTGACGATTTGGGAGTATGAGTGTTTGTCTTGTTGAGAGAGTGCTGTCTTTTAGGTCTGGTTTTGTTGAATTTGGGTGGGTCCTTTTTCTGGCTATCGTGATGTATGGACCTGCTTCCTGTTAGCTGGAATTCCGAGCAGTTCTGTCTTCAGTTTGTTAGTTTGCTGTTTGTCAAAAAAGACTTTGTAAAAGACTATGTTTCTTTTGGCTTTTCTTCCAAAAGCTGTGTAGTAATTTGCCTGATCTCTAAAAGTTGCAGACCTGTAACAAGCCAGCTTTAATTGTTGCCATTAATACGTTGGGGCATTTTTTGTATATTTTTCCAGAGATCATCAACCTGAGAAATCTTGAACGTGTATTGGCAAGAGAGGAGGAGGTTAAGAAAAAAGCCGTTGTTCATAAAGCTGTTTATGAGGGTCCTACGATTCGGTTTTGCTCAAGAGATGGTAACTTCTCTATTAAAATATCATCAAGCATCTGTTTGCATCTGGAATGTGGAATTACTGGCTTCTTTTTTCTACATTATGAATTATGATAACCAATACCTTAGGTGTTCTCAATAGCTTATTATCAGTTCTGTGCTGAATTAGGGGAGTCACGCTTGGAATTCATCAACGGGGCATCATTTGGGTCAGAACTTTGTACAACCTCAGCTCCTTGTAAGTGCAAACTTTCATTTGGTTATTCTTTGTTATTTGCCTCTGCCAGTAATCACTAAATGTGAGCATCCGTGACAGATTGAGCTCATACTACTTAAATGCCCTCCTCTTCTCATGATAATATTCTTCATTACAGATCCAGAGAAATCTATTTGTGCTGTAACTGGACTTCCTGCCAAGTATGTTCTCTGAGCGCACATTTGAAGTGACCTATATTGGCCTTTGATGTTCCTTTTCTGAAGCTGAAACTGTTGCTGTGTTTATTGCATTGATCTAAATAAAATTGTGCACACGTGCACCTTTTGTTTAACATCTCCACATTATTAGCAGAGTGTTTATCCTTAGACATTGCATTGCTTGAAATGCTGTTTGCCACATCCTTGTTATTGTTTGCCATCTTGTTCTGGTGAAATAGCTACATTATTTTGACTTGGCAATTTGAAATGATCCCACAGAAGCCGATTTGTTATTATTTTCTAGCCACTGTAAGACCACCTGTAGGATGTGCATTGTGTTAATATGGTCCTGCTGAAGAGATTTGGAACGTAGTTTTATATCTTTTTCAAAGTAGTACATTTGAATTCTGATCTGATTGTACTGTTATTTTTGGATGATTTATTTTACGAGCAGATAAGCTTATTTTAGGTTTACAATCTTGCAGATACCGTGACCCAAAGACGGGGTTGCCATATGCAACAAAGGAAGCATTTAAAATCATCCGAGAAAGGTACTCTTTCTAGCTTTGTTGTTATTAGAATCATATGTTTTTTTTGGCGACTAACTGCTTGAATGACTTGAAATTTTCTTATGTAAAATGCACTTAATATGTGAACATCCTAACATTTTGTCCATCGATGCTTGGCAATCAGTTTCCTGAAAGAGGAGGCTGACAGGAAGAGGCCCAACTTGGCGAATATGGGAGAGCTCTTTGAATCAATAACAGGAGAATACTCCACACCCAAGAAGAGAAGAATTGAGGCAAGATCACCCAGCATCTCATCAGACCAAAGGCATGGAGGACGCTTTCGACGAATACCTGCTCTTGATTTGCTGGACGAGGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027516

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027516&oldid=33773"