BGIOSGA027531

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Revision as of 07:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027531| Description = Polyubiquitin oub2| Definition = Oryza sativa Indica Group BGIOSGA027531, complete gene.| tag = | tid = BGIOSGA02753...")
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Gene Name

BGIOSGA027531

Description

Polyubiquitin oub2

Definition

Oryza sativa Indica Group BGIOSGA027531, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA027531-TA

Ensembl Protein ID

BGIOSGA027531-PA

Length

3912

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5356056..5359967

Sequence Coding Region

5359476..5359967,5356056..5356328

Genome Context

<gbrowseImage1> name=IndicaChromosome08:5356056..5359967 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:5356056..5359967 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGATCATCGTGAAGACTCTGACCGGCATCACCATCACCCTCGAGGTGAGACCATCCGACACGATCGACGACGTGAAGGCGAAGATCCAGGACAAGGTAGGCATCCGCTCCGACCAGCAGCACCTCGTCGACGTCTCCGCCGGCAGCAAGCAGCTCGACGACGGCGGCAGCACCCTCGCCGACTACGACATCCACGACGAGTCCACGCTTCACCTCGTGCAAGTCCTTCTCGGCGACCACGGTGAAGTGCGGATCGTCGTCAAGGCCATCGACGGCGAGATCGTCACCCTCGGCGCCGCCGATGCCATCGACGACGACCACGACGACGTGGAGGCGATCGGCGGCGGCGGAGGAGGCTCGACTTCGCTGGCTGCGAGCGGGTTGAGGGAGAGCGTGTGGTTGATGGTTAGAGTGTGCAGGATGGCCGGAGTCTTCTCCGTTTCCAACCTCGCCGGTGTGGCTTGGAGGGTTGGGCTGTGTGCTCTCGCTATGCAGATCTTTGTGAAAACCCTGACCGGCAAGTCCATCACTCTTGAGGTGGAGTCATCCGACACAATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGAAGGACGCACCCTTGCTGACTACAACATTCAGAAGGAGTCGACCCTCCATCTTGTCCTCCGTCTCCGTGGTGGCCTGTGGGCTTGCAGTATTGGCTCGCCTTTTTATCTCTTGCTATAG</cdnaseq>

Protein Sequence

<aaseq>MQIIVKTLTGITITLEVRPSDTIDDVKAKIQDKVGIRSDQQHLVDVSAGSKQLDDGGSTLADYDIHDESTLHLVQVLLGDHGEVRIVVKAIDGEIVTLGAADAIDDDHDDVEAIGGGGGGSTSLAASGLRESVWLMVRVCRMAGVFSVSNLAGVAWRVGLCALAMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGGLWACSIGSPFYLLL</aaseq>

Gene Sequence

<dnaseqindica>1..492#3640..3912#ATGCAGATCATCGTGAAGACTCTGACCGGCATCACCATCACCCTCGAGGTGAGACCATCCGACACGATCGACGACGTGAAGGCGAAGATCCAGGACAAGGTAGGCATCCGCTCCGACCAGCAGCACCTCGTCGACGTCTCCGCCGGCAGCAAGCAGCTCGACGACGGCGGCAGCACCCTCGCCGACTACGACATCCACGACGAGTCCACGCTTCACCTCGTGCAAGTCCTTCTCGGCGACCACGGTGAAGTGCGGATCGTCGTCAAGGCCATCGACGGCGAGATCGTCACCCTCGGCGCCGCCGATGCCATCGACGACGACCACGACGACGTGGAGGCGATCGGCGGCGGCGGAGGAGGCTCGACTTCGCTGGCTGCGAGCGGGTTGAGGGAGAGCGTGTGGTTGATGGTTAGAGTGTGCAGGATGGCCGGAGTCTTCTCCGTTTCCAACCTCGCCGGTGTGGCTTGGAGGGTTGGGCTGTGTGCTCTCGCTGTCCGTACGACAATGGAGGCTGTTCGTCTGTGCTGCGGAGATTTTCGACAATGTCATTCGTTGTAGTATGTGATCTGCAGAGATTTTAGACATGTCTCTCTTAATCAGTTAATTGTTGTGATTGTGATCGTGATCCACTGTTTGCTACTGTATTAGTAATGTGACTGTAATGTTGTTGGCTTTGTGTTGCTCGTGGTTGCAGACTTCCTGTTCCGCTAAGGTCCTCAGCCAAGACGAATTATGCACGTTTTTTTTCTTTTATTTACTTTAATTTACCGGGCCCATTTACATGAGCCAGGATTTGGGCCTCGTGGAAAGCAGAAGCTTAGCTCAAATACAGGAAAAAAGTCTACTTTATGTCCCTCGAAATGGTTGAGTTTTCAAACTTACTCAACCTTAAAATCGGGTATAACGCATCCTTCATCTTCTAAAACCAGTGCAAATCTAATTCTAAGGTAGTATTAAGCATGACTTTTGCTGACATGGCACTTACAGTTAATGAAAAATAGTAGGACCCACATGAGCCCACATGTCAAGGGTTCATATCTATTTCCTTTCTCCCCTCTTCCCCACATCTTTCTTGTCGATCTCTTCCTGGTATCTAGGAAGACGGCCGACATGAAAGGGGAGGGGGCAAAAGAGGACCAAAGCAATAGCGACCTCGTAATTAATCCTAGGCAATCGCGGCTTCGCTTCCTTCACACGCTGCCACGCGGCTCAACCTCCTAACCACGCCGGTATGTAGCCCGCTTTGTCCCTACCATCTACCACTCGAACTCCTCACCATGTCTGGCTCTGCCACTTCTGCCGCCTTGCGATTCGCGAATTGTGGATCTCAGGCCTCTACAAGGCCTCCTCCACCACCCTCCAAGAGCCCGTCCTACATCAACCCCTCTGTACCGGACATCTTCATTGAGCTCTGCATTGGTCGTCGCAGTCCAGCACCCCGACTATCCACAACATTGCCTCTTGCTTGCTGGTAAGGGCCCGCCCTGCCTCGTTGTCATAGCCACCGAGTTTCCTCTGTCTATCGCTCTCGATGGCACTGCCGACTCGGTCTAGAGTACCAATCTTATTCAAGCTCTGGTTGCCACCGACCCCATGTCCTCGCTCTGCCTCGTCCCCCGCTGCTTCTACTAGAGTTTGCCGTCAAGGTCTGTTCCAGGAGAATCATCTCCACGCATTGAAGAAAGGGGAGAGAGAGTGGGGGAGAAAGGGCATCCAGTGATAATGGGCCTCAAGGGCGGATCCACAGTATGTGGAGTGGGGTCCTAGGACCCCACTCAAATTTAATATTTAGTGTATTACTAATGTGTAATTAAGTAAAAAAATTTTGAGCACACTATCAATTCTAATAAGATGCTCCCACTCGATTTTTGGGCTAGGTCCGCCTCTGATGGGCCTCACGTAATTTTTTTTTAATTTCTTTTCGATGGCCATATAGGCTGCACTTGGATGGAGATAGAATAAGTCAAACAAGCAAGTCAAGTGAAGCCGCTCTCAATATTACCTTAGGACCTCATTTATACTAGTTTTCTACGAAGATAGAACTCATATCTTAGATTAGGTACGTGAAATGAACTTTTTTTTTTGTCAAAACAACAAATGAAGTAGTACAGCAAAGTGGAGAGTCGATGACTTGTACTGACTACTGAGGATCCGCATGCAGCGGCCAACTAGTTCTTCAAGGAAAGACAACGAAACCGGGCTTGGAATGACCGACGAATGACAATGCTGCCGCGGACCGACGTTGGAGATAAGGAAGAAAATCTAATGATGAGTAAATACAAATTAATTATAGATATAACGAAAAATATGATGCAAATTGATTCTATTGTAGTCTCTCTCAAACCCTTTTTTTTTTTTTTGAAAACCGCTCTCTCAAACTACCATATGGAGTATATTATAGTGCGTATCATTGCTCGGTTTCTAAAAAAAAAAAAGCGTATCATTGTTTACCTCTCCTGTGTGCCGGTATCTTTGCATAATATAGCTGTTGCCAATAATAAAAGCTAGAAATAAAATTATTGTGTGCATTTCCTTTTACAAATAAAGATTGCTACACATATATGAGCCTTGTTAGTAGTATAACCATCAACAACCACAATTGTAAGACATTTCCAGTTCGAACCATGGAAACAGAAAACAAAACGTCCAATTCGAAACACGTAAAAAATTGGAAACAGAAGAACAAATCAGAACTGATATCTTGGACCCGGCCGTTTCCATCTGCGGCGCATCTGAACAGAACAGGTAAGCTATAAATAGCGATCGAGCACCCCACGCCGTCTTCTTCCTCATCGATCAATCCATTCGCCTTCGCAAGGTACGTACCTAATCCTCCCGTGCCCTAATCACCTTCTAATCTCGTAGTTTTGATCGATCGATTAATCACTGAAGATCGGTCTTTGGAACTGCACTGCTGCTGTCATATGTTGTTTCTCGCGTACTCTGTCGTAGGGCCTTGTATAACCGTGTTTTAGTTCTGCTTCTGCACACCGTGTATGGTTTTAACTAGATTTGAATTTTCCTGTGTTAGTTAGTAGATTAGTTTGGCTGTTGCGCTTGATTCGTGCGTTTGGATCTGGCTGTTTACGCTTGAAAGCCTCGCGTAATTGGATCGTCCGGCGTGAACTCTGTTTTTGATGCTGGTTTAGTAGATTAATTTGCTGAACATGGGATTTGGTGTGTGTGGTTTGCTGTTTCGCTGTACAAGTTCGATTTGGTCTTTATAGGAGATTGTCAGTGTGTTCTAGGATACATGTGTATTGATTAATTTGAAATCCAGATGGCCATTGCAAATCGATTATACTCACCCCTATCTGTTTTACATTCAGAACTACAAATAATGCGTGCATGGTTTCATAGCTAATTGTTATTGCTGCTTCTATTCCAAATATGGGGTGTTTCAGAGCTAACTGGATCCTTTTGTTAATTAGTTGTACAAGGAAAAACTGCACTCATATCAGTACTAATGATATCTGTGACTCGGAATATGAATGTATTTCTATGTGACATCAGACTGAAACTATGTTCTACATCAACCTATTTTTTATTTGGAATGTACTCTATTTGTTAATTGTGCTTTGCTGTGCATAGTTACCGTGTGCTTCAAATTGATCTAACATCACTGTTATCTTACATCAGATGCAGATCTTTGTGAAAACCCTGACCGGCAAGTCCATCACTCTTGAGGTGGAGTCATCCGACACAATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGAAGGACGCACCCTTGCTGACTACAACATTCAGAAGGAGTCGACCCTCCATCTTGTCCTCCGTCTCCGTGGTGGCCTGTGGGCTTGCAGTATTGGCTCGCCTTTTTATCTCTTGCTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027531