BGIOSGA027553

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Revision as of 07:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027553| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027553, complete gene.| tag = P0577G0...")
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Gene Name

BGIOSGA027553

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027553, complete gene.

LocusTag

P0577G06.4

Ensembl Transcript ID

BGIOSGA027553-TA

Ensembl Protein ID

BGIOSGA027553-PA

Length

4245

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4950795..4955039

Sequence Coding Region

4954830..4955039,4954596..4954718),complement(4954363..4954491,4954067..4954152),complement(4953666..4953789
,4953489..4953537),complement(4953123..4953205,4952563..4952630),complement(4952059..4952136
,4951547..4951634),complement(4951299..4951415,4950795..4951136

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4950795..4955039 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4950795..4955039 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATACTGTGGTGGGTTCATCATCCAAGCCATGCGGGCCGCTGACGGATTACCGCATTCCGGATTACATCCTGAGGCCGGATGCGCAGCGGGTGCTTCTTGATCATGCGCCCCCGTGCCCCGTGCTGGTGTTCATCAATTCTGGATCTGGTGGTCAGCTCGGGAGCAGCCTGATCAAAACCTACCGTGAACTTCTCGGTGAAGCGCAGGTTTTCGATGTCTCCGAAGAGGCTCCGGATAAAGTGTTGCACCGTTTGAATGTCAACCTTGAGAAGCTCAAGATGGAGGGAGACATTCTTGCTGTTCAAATTTGGAGAACTCTCAGAATAATTGTTGCAGGTGGCGATGGTACGGCAAGCTGGCTGCTTGGGGTAGTCAGTGATCTCAAGCTTTCACACCCTCCTCCAATTGCTACTGTGCCTCTGGGAACCGGAAACAACCTTCCATTTTCATTTGGATGGGGAAAGAAGAATCCTTGTACTGACCAAGAGTCAGTAAAATCATTCCTTGGGCTAGTGAGGCATGCAAAAGAGATGAAAATTGATAGCTGGCATATCATGTTGAGGATGCGAGCTACAAAGGAAGGTCCATGTGATCCAATCGCCCCCTTAGAGTTGCCTCATTCATTACATGCATTTCACCGTGTGTCAAGTAGTGATTCCCTCAATATGGAAGGTTACCACACATTCCGTGGAGGATTTTGGAATTACTTTAGTATGGGTATGGATGCAGAAATTTCTTACGGATTTCATTCTGAAAGGAAGAAAAATCCAGAGAAATTCAAAAACCAGCTGACAAATCAGGGTACATATGCTAAGGTTGGACTTAAACAAGGATGGTTTTGTGCTTCTTTAAGTCATCCATCTTCAAGGAATATTGCTCAACTTGCAAGTGTGAAAATCATGAAAAGAGCCGGTAGCCACTGGCAAGAACTTAACATTCACCACAGCATTCGATCAATCGTCTGTCTCAACCTGCCTAGTTTCTCTGGAGGTCTGAATCCTTGGGGCACACCTGGCACAAGGAAAGTAGAAGAGAGGGAGCTGACGGCACCTTTTGTCGATGATAGACTTATTGAGGTTGTTGGATTCCGTGATGCCTGGCACGGACTTGTCTTGCTGGCCCCAAATGGACATGGTACCCGCCTTGCACAGGCCCAAAGGATCCGTTTCGAGTTCCACAAAGGCGCAGCAGAGCACACCTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCCCTCCCAAAAGATGACGACACTGTTGTTGTGGAGATCTCCCACCTTGGTCAGGTCACCATGCTTGCCAACGAGCCCTGCAAGTCGAAGAGCGTCCATGACGACCAATCCTCCCACGCGCAACACAGCGGCCATGGCAACAACGACGACGACAAGGACAGCATGGAGGACGAAGATGAGTGGGAGGATGGCAGGAGGAAGTTTGGTGCCGCAGATACGTTCAAGATCCCTGACGAGGTTGACATTGCTCACCTCAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MDTVVGSSSKPCGPLTDYRIPDYILRPDAQRVLLDHAPPCPVLVFINSGSGGQLGSSLIKTYRELLGEAQVFDVSEEAPDKVLHRLNVNLEKLKMEGDILAVQIWRTLRIIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGKKNPCTDQESVKSFLGLVRHAKEMKIDSWHIMLRMRATKEGPCDPIAPLELPHSLHAFHRVSSSDSLNMEGYHTFRGGFWNYFSMGMDAEISYGFHSERKKNPEKFKNQLTNQGTYAKVGLKQGWFCASLSHPSSRNIAQLASVKIMKRAGSHWQELNIHHSIRSIVCLNLPSFSGGLNPWGTPGTRKVEERELTAPFVDDRLIEVVGFRDAWHGLVLLAPNGHGTRLAQAQRIRFEFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLGQVTMLANEPCKSKSVHDDQSSHAQHSGHGNNDDDKDSMEDEDEWEDGRRKFGAADTFKIPDEVDIAHLS</aaseq>

Gene Sequence

<dnaseqindica>1..210#322..444#549..677#888..973#1251..1374#1503..1551#1835..1917#2410..2477#2904..2981#3406..3493#3625..3741#3904..4245#ATGGATACTGTGGTGGGTTCATCATCCAAGCCATGCGGGCCGCTGACGGATTACCGCATTCCGGATTACATCCTGAGGCCGGATGCGCAGCGGGTGCTTCTTGATCATGCGCCCCCGTGCCCCGTGCTGGTGTTCATCAATTCTGGATCTGGTGGTCAGCTCGGGAGCAGCCTGATCAAAACCTACCGTGAACTTCTCGGTGAAGCGCAGGTATATCGTCTGCGTGTTTGGAAATGTGATTTCCTTTCTTTCCTTGTGGCGTCAGGAAAGGAATGTGGCTTTTGTTATATCAGTTGTTGATGGCTGCTGTGTTCTTTTCAGGTTTTCGATGTCTCCGAAGAGGCTCCGGATAAAGTGTTGCACCGTTTGAATGTCAACCTTGAGAAGCTCAAGATGGAGGGAGACATTCTTGCTGTTCAAATTTGGAGAACTCTCAGAATAATTGTGAGTGATGATGCTTTGAGGTTATATTATGCAGATTTGCAGAGTAGGAAGTCTCTTTGGCTTTCCATTTCCATTTCTGTTGACTTAAAAGTGGTTTCAATTAGGTTGCAGGTGGCGATGGTACGGCAAGCTGGCTGCTTGGGGTAGTCAGTGATCTCAAGCTTTCACACCCTCCTCCAATTGCTACTGTGCCTCTGGGAACCGGAAACAACCTTCCATTTTCATTTGGATGGGTAAGTGGTCAGAAATTAATGTGTACTTAACAAATCATCTTCTTGTGTCAATTAGTTTTTGAAGGGAGGTGGCAAAAGTGATGTACTTAAACTAGAGTCCATTATGTATAAGTTGTTCTGTGTTAAATGATCTTTTAAATGATTCTTGCCTGAACTTTAACCTGTTCCTGATCATGGTCTTGTATACTTTTGCTGAATTAAACATCGCAGGGAAAGAAGAATCCTTGTACTGACCAAGAGTCAGTAAAATCATTCCTTGGGCTAGTGAGGCATGCAAAAGAGATGAAAATTGATAGGTAATGCCATAAAGATATCACTTTACTTTAAGCTTTGACTTTTGCCTTGATCCTGCTCATAAGGGTTAAGCGGCTGATTAACTTATTTAATATTTGCCATAAACCCCCAAACTTGCAATCAATCAATACTGAACTCTTTTAATGAACCTTAAGTAGTTGAATAATTACCTCTTCAAATCTGTTTGTCCTTCCTCCCAGTCTAAAACATGATTTCCCTTTTATACCTCATTCAAACACAACAGAAGACTACAATGTAATGTGCACATGAATGTTTCAGCTGGCATATCATGTTGAGGATGCGAGCTACAAAGGAAGGTCCATGTGATCCAATCGCCCCCTTAGAGTTGCCTCATTCATTACATGCATTTCACCGTGTGTCAAGTAGTGATTCCCTCAATATGGTAAGACAATCTGTCTAGTTTTTCTAAGTTACTATGTTTCTTGTTGACGAAAATTGTTATATGTCAAGACCCAAGTGGCATTGAATTTAATTCATTTCCTCAATTGGTCTTTTTTTTTTCCCCTTCAGGAAGGTTACCACACATTCCGTGGAGGATTTTGGAATTACTTTAGTATGGGTAAGGCTTTGTCTGTTCATGGCCACTTCCAGTTATGGACCCTAAACAGTCTGATGGTTTGGTTTCTAGTTTACCGTGGTACTTGATGTTGCATGCTAGTTTGTGCTATGAAGATGCAGGCACCTGCTGGTTCCATGTACGGCAAGTACTGTGGGACTCATGATCACTACTGTCGTAGTTTATTATATTTGGAAAAAAGATCCCAAGTTTCTTCAAGAACCTAGAGCATATATTGATTCAATGACTCAGAAATTCAAAATTTCATACGTGATGATCTTTGCAGGTATGGATGCAGAAATTTCTTACGGATTTCATTCTGAAAGGAAGAAAAATCCAGAGAAATTCAAAAACCAGCTGACAAATCAGGTATATTATATTCTTATTATTGTGCATTGTGATGGTTTCTTTTGTACTGTTTCGCTGTGCTGCAGATTCTGAATTACTCGTAAGTTTAAAATTGTTCCAACTGAACTGCCTCTTTATTTGGCAGGCAGAGACTTGAGACGTACAATTGACCTTATTTAGATTCTCTATGTGCTCAACACCCATTTCTTATGTCTTCCTGTGGGATCTTACTATAGAGAACTTTTATGAGCTATGAGAAGTGAGGAAGTGTCGAATGGGACCAATACCCATTGCATGTTACTGGAATTCTTAACTGTAGTTGTTACAAAATATTGCACTTACATCTCTAGTTCTGTCAAATTGATTCCTAAATATGTAATCCTTGATAGCTAATATACCTGTAAATATGTGAAATTTACTTCTATATTGATTTAGATAAATGTCCCTCTAGTCAATTTCAATCTGGCTGAATGACTTAACTTTGCCAGGTGTTAATCCATTTAATCTATACAGGGTACATATGCTAAGGTTGGACTTAAACAAGGATGGTTTTGTGCTTCTTTAAGTCATCCATCTTCAAGGTAGCTTGTTGATTTATCATTAACATATTTCATGGTATACCTGTTGTGCTAGTTGTATACTTGTATTGTGTTATCTTTGCAGTCAAGGTGTCTCTTATTTAATATTATACCACCTAACTCCTATAAATATCTGTGAGTAATGTGGAGAGAGAAGTTATAGGGAGTATACCCACTCCAGCATTTTTGGGGGTGTTCAATGTACATTGCATTTACAAACTACACCAATCAATTCATTTGTGCCCTTTTTTGTTCCTTCATATTAGCACTATCCTTGCAGTTTATAGATTCAGTCCACAAAATTTATTGTCAAAGCTTAAACCTGTACTTGGCAATGTTAAATTTGAAATTTGGTGTAATCAATTTGTGTGCGTTCAAGTTGTTTCCTTCTTTTCGTTTTGGTTGTAAGGTTGAGTGCTTCATTTCCAGGAATATTGCTCAACTTGCAAGTGTGAAAATCATGAAAAGAGCCGGTAGCCACTGGCAAGAACTTAACATTCACCACAGGTAAACATTGTTCATTCCTTTTGTTGTACTACGGATTATTTTTTCCCTCGTGTACTGTTATTTGAGCCTACTAGTATGATATGATACAAGAAAGCTTCTCATTTGCACTTGGAATATTTTGCTTATACTGTTTCTTTTTTGGGATACGCAAAAGGCTTGCGTATCTTTTCTATTAAGATTGGAAGCAGTATACATTACTTTGAAAGCTGTAAAAAGAACTGAATCGAAAAGAAAAGAAAACAGAAGAGAAGAAAAACTCGGATATACTGTTTCAGTTTTGCTTCCTTGCAAGTTACAATATGTTCCTTGGATTTCTTGCTTGCACATGTTGGCAACATTTCTGATTTATGTTCTGCTTGTTGATGGAGGATGCTACCATAATCTATGAGCAAAGTTGTGACCTGTGTACTACTGCCTCTTGCAGCATTCGATCAATCGTCTGTCTCAACCTGCCTAGTTTCTCTGGAGGTCTGAATCCTTGGGGCACACCTGGCACAAGGAAAGTAGAAGAGGTGAGTTTACATGCACTACGCTTGTCATTCAACACGTGAATTTCGCATTGTAGCTATTCACAGATTATTTACTGGAAATCTTCAGAGGAACTAATAATCAAACCTCTGTCTTGAAAAAACAAAATCTACAGAGGGAGCTGACGGCACCTTTTGTCGATGATAGACTTATTGAGGTTGTTGGATTCCGTGATGCCTGGCACGGACTTGTCTTGCTGGCCCCAAATGGACATGGTACCCGCCTTGCACAGGTATGAAGTATATGTAAAAGTGCTTCCATTTTGTCCATTTGACATCCCAGAACTGAAAACCACTTCTTCCCCATTGTGCCGTAGTCATAATTTTCTACGTCAAGAACTAGAACTAGTATAGTCCTCTCCATTCAAGCTTATGTGGACATCCTTCAAAATCAGGCCCAAAGGATCCGTTTCGAGTTCCACAAAGGCGCAGCAGAGCACACCTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCCCTCCCAAAAGATGACGACACTGTTGTTGTGGAGATCTCCCACCTTGGTCAGGTCACCATGCTTGCCAACGAGCCCTGCAAGTCGAAGAGCGTCCATGACGACCAATCCTCCCACGCGCAACACAGCGGCCATGGCAACAACGACGACGACAAGGACAGCATGGAGGACGAAGATGAGTGGGAGGATGGCAGGAGGAAGTTTGGTGCCGCAGATACGTTCAAGATCCCTGACGAGGTTGACATTGCTCACCTCAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027553