BGIOSGA027561

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Revision as of 07:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027561| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027561, complete gene.| tag = P0583B0...")
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Gene Name

BGIOSGA027561

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027561, complete gene.

LocusTag

P0583B06.11

Ensembl Transcript ID

BGIOSGA027561-TA

Ensembl Protein ID

BGIOSGA027561-PA

Length

4524

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4837107..4841630

Sequence Coding Region

4841580..4841630,4841362..4841448),complement(4841216..4841281,4840926..4841119),complement(4840318..4840459
,4840116..4840196),complement(4839570..4839698,4838549..4838626),complement(4838005..4838076
,4837244..4837324),complement(4837107..4837154

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4837107..4841630 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4837107..4841630 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTTCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCTGGAAGCTGGGATAAGACTCTAAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGACGGAGTTCAAGCGCATCCAATCGCCACTCAAATACCAGACTAGGTGTCTTGCTGCATTCCCGGATCAACAAGGATTTTTGGTGGGTTCCATAGAAGGAAGAGTTGGTGTGCATCATATTGATGACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MATLGLAPNMNPNKSFEVLPNPGDSVSSLSFSPKSNLLVATSWDNQVRCWEIVGGSSQPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAQTVAMHDAPVKEIAWIPQMNLLVSGSWDKTLRYWDTRQSNPVHVQQLPERCYALTVNYPLMIVGTADRNLVVFNLQNPQTEFKRIQSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHIDDSQQSKNFTFKCHREGNDIFSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAFSRCPLPIPCSTFNSDGSIFAYAVCYDWSRGAENHNPATAKTSIYLHSPQESEVKGKPRIATSRK</aaseq>

Gene Sequence

<dnaseqindica>1..51#183..269#350..415#512..705#1172..1313#1435..1515#1933..2061#3005..3082#3555..3626#4307..4387#4477..4524#ATGGCGACTCTTGGTCTTGCCCCAAACATGAATCCAAACAAGTCATTTGAGGTGTGATGCTTTATGCAACAATTGTCCTCCTTTTCTATCTGTGCTTGTGTTGGTCCTCACATTCTGTAAATAATAAATCATACTAGTATTTACTTTGTAAGTTATTTATTATGTTTAAATTGTAAATGCAGGTACTGCCTAATCCAGGTGACTCCGTATCGAGCCTCAGTTTTAGCCCAAAGAGCAACCTTCTGGTGGCAACTTCCTGGGATAACCAGGTAAGTTTATTTTTCCTGTAAACTTTCAGTATGCATTTATCAATGTGTTCTTACCAGGTTTGACTTTGAGTTTTGTGCAGGTGCGGTGCTGGGAGATTGTTGGTGGGAGTAGTCAACCAAAGGCATCTATATCGCATGACCAGCCAGTATGATCTCAATATTTCTCTCAAGACCACATTCACATAATGTACAGTATTGATTTTCCTAGTATTTAGTGTGCTCATTGATTTGTTTTCTATCAGGTTCTCTGTTCAGCTTGGAAGGATGATGGAACTACTGTGTTCTCTGGAGGCTGTGATAAACAAGTAAAAATGTGGCCTCTGTTGTCTGGTGGGCAGGCTCAGACTGTTGCAATGCATGACGCACCTGTCAAGGAGATCGCTTGGATTCCTCAAATGAATCTTCTTGTCTCTGGAAGCTGGGATAAGACTCTAAGGTGTGAAAAATCCAATCCTTGCAGCCTCGGTATTCCTTTTTACATGGAATTCGAATTCATATCAACCACTCTATTTACTCAGATAGTTATTCGCTAGTAAGTAGTAACTATGGATTCAAAATATACACCTTGTGATCGTTCCTAAAAATATTTGTTAATTTTAGCTTATATTGTTAGGGAGACCCTAATTGCTATTGATATTTGATTTAGGAAGCTTGAGGTCAAGCATCTAAGTTCAAGCTGTCTATTTGATTAATAGGCAATTAGGCATGCATTTTATATTGGCCCATATTTGGTTTGCCACCATAGACAGCCAAACTTTGGTAATGTGACATAAGTTGTATGAGCATTACCAAAAAATTTAGGGAACTTTTTCTTAATCTCATCGCAGCACATAGGCCTCTGTTCTTGTGGTTACAGTGATCTGTTCTAGTCAATCCAATACTGACCACTTTGCTATTTATAGGTATTGGGACACAAGGCAATCAAATCCTGTCCATGTTCAGCAACTTCCTGAGCGCTGTTACGCACTTACAGTGAATTATCCCCTTATGATTGTGGGAACTGCTGATCGTAATCTGGTCGTCTTCAACTTGCAGAATCCTCAGGTTGGTCTTTGTGAACATCGCACATGTCCATTAAAAATGAATAATGGGGATCACTCGTTTTTCATCTGCAACTTCTCATATTGAACTGAGTGTTTTTATTGTTTCCTGTTTTGGTCATTAGACGGAGTTCAAGCGCATCCAATCGCCACTCAAATACCAGACTAGGTGTCTTGCTGCATTCCCGGATCAACAAGGATTTTTGGTAATGCAACTTTTTTTTGTAAAAATTTCTAGTCTATTCTAAATGCTTAAATAGATAACTATTATAGCAATGCATTGTTATGTACTTATGGTCTTTTTCTTGGTTGGTATTCACCCAATGGCATTGTCTTCAGCTAGTATATATTTGACACCAAAAAAATTGGTACAAGGTTCAATACGAAAAATCGTGTTTAGCAATTTCTATAGTTGTGCATCTTCCCATTTATAATCTGCCTAGAGATGTCTAGCAAGGTAGGTTTTGTATATGCTTGAACCAACCAATGTTTACCTTTACCCATAATCAGCAATGACCTTGTTCGGATAGAGTGCTCAGCGTTACCTAAGAATAATTTCTATCTGACATTATACAAGAGGTATATTTCCATGTGTCTGACTCTGACCCTAATTTTGTTTCAAGGTGGGTTCCATAGAAGGAAGAGTTGGTGTGCATCATATTGATGACTCACAGCAAAGCAAAAATTTCACGTTCAAATGTCACAGGGAAGGGAATGATATTTTCTCTGTCAATTCACTCAATTTTCACCCAGTAAGATCTCCGTCTGTCTCTTGTTTTCCTATACCTTAGCATATTTATGATATTTTTTCTGAATGGTCTTACCTTGCTGTGGAGTACACATGAATGCCATATAGCCACTTTTGCTTTTATTGGAAATGCCTATGCAGGAGAGTTATGCTGAGTTATGGTGCATTTTTTTTCTTAACCATCAATTGATTTGTAGAACAGTAAAAACACAGTTTCTTCTTCCACAAAATACCTCTAATTCTCTTTCCATTGAACAGTATACATGTTTTGCACAATTCTAACTTTATATATTTTGACCAATGAATTCTGACAATATATACTATATACGAGTGGCACCATTGGTTTCATACCCCAAAGTTCTCTCATATGATCTTGATTAGTGTGCCTGTTGGTGTCTGTCTTTGCTCAGCACTAGCACCATGCCTAGGCAACTGAACTACTAGACAGCCTGTAGCCCAACTTGGAGGTGTTAGGTGTCAACCTGCCACAGGGCCTAGCACCTACGGCAACACATTTTTTTTGCAGTTATTCACAAAGTACTGGTTGAAGTTCTACGTTGGAATGTAGGATACTTCCAAGTAAGGAACGTCAAATGTTAAGACTTAATCTAACAACCGTATATAATCTGATCATGCAGATGTTGCAATTCTCATAAAGATATGTCTCAAAATACTCCAAAAATGTCCTATTTACGATTCCATCGAACAATTCCATATTATGACTATTGAATGTTATGCATACATCATAGAACACCTTTTCTTCTTTTGGTTATGATATTTTCAGTTATAGGATCTTTTTCATTAAATTGGTATGCTTCATTGATGAATACATCTCTAGGATATGTTTCATTGAGAAAAGCATTGCCGACTTACTGGTTTTTGAAGTCTGGAAATCATAGTTTGCGGAGTTATATTTAAGGTTTCATATTTTCTATCACGTGGCACAGGTTCATCACACGTTTGCAACTGCTGGATCAGATGGCGCATTTAATTTCTGGGATAAGGATAGCAAACAAAGACTGAAGGTTTGATGTTGGCTCTTTTGAAGTTCCATTTGTACTGGTTATTGCACTTGTATTTTTGTTCCCTTGAGTATTCAGTGATTTTTAATAGTCATAATTGCTTTATCTGTTATTTTAGTGTGCTGCATAAATATTCTTGCACACATCTGGAAACCAAACCAAGATAAAGCTCATGAACTTACTTTTGTAAATTCAGAACAGTGTTCAAGAAAAAATCATCTGTTTGTATCTGCTCAACCATGTAATTAGTGTTATGCAATTATTTTTTAGTGAAAATGCTCATATTTTTACTCGATGGCATGGATTCTCTTATTGCATGAGCAATCTGCCTAATTTGCAATCATATGGGTGCTTAGTACAAGGCAGGTCATTTGTGTTTGCTAATTTTGTTTTGTTGCAGTCAATTTCTCACATGCATCCCTTTATTTTATACAGAATATAATCATTCACTTCCCATGTCACTTTTTTTACACAGGCTTTTAGTCGGTGCCCTCTTCCTATTCCTTGCAGTACCTTCAACAGTGATGGGTCGATATTTGCTTATGCAGTAAGTCAAGTGATGCTTGAGTATCTTGTTGTACTTTATTAGTTTGTGACTATATGCAACCATGTTTTCTGACCAGGTTGAATTTAGATGTATTTTATTGTTTCCCGTGCCACAATTCTGCAATGAACTAGACATCTTGAATGCACATATTGAGGCCCTGTTTGATTCAGCTTAGGATTATTATAATCTGGATTATTAGGAGTAAGCTGAAACAAACAGATAGCTTATTATGATAGATCATTACAATCTATAAGCCATATTACTATAATCTGGTAATCTACTCTAAAGGTGCTTTTTTAGATTTTTGGGTGGCTAACAGCTAATAATCCAGAGAAACAAACAGCTAACAGCTTATTCTATGTCGGCTCATTATAATCCAGCTTATAGTTATCTGGCTCAATAATCTAGATTACAATAATCTTAAGCTGAAACAAATAGGGCCTAAACATGGTGAAAGAAGTGCCTGATGTTTTCCATTCATTAGATAGACTTTGAGTTCAAATGGATGCCCGGTCCTGTTTAACCTGTATGTCAAATGCATTCCCTTGGATTTTGAATTCAAATGAAATGCTTGTTCTTGTTGAGCTGTAAAAATGCTAAGTGATAGTTCTAACTGAGGCTCCAAGTTTTGAAGAAAAAGACTATAGTTTGGTTAGTTAACCATGTTTACTGTTAACCAGGTCTGCTATGACTGGAGCCGTGGGGCTGAAAACCACAACCCTGCCACTGCAAAGACATCCATCTATCTTCACAGTCCACAGGTAATAGTTGTTTACAGTTATCATCCTGAGATAATTTCCTGAGTTTGTCTCACAATGCATTTGCACTGACGTTCCCTCATTTTGAATAGGAATCTGAGGTTAAAGGGAAGCCGAGAATCGCAACAAGTAGAAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027561

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027561&oldid=33818"