BGIOSGA027568

From RiceWiki
Revision as of 07:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027568| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027568, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027568

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027568, complete gene.

LocusTag

OSJNBA0054L03.38

Ensembl Transcript ID

BGIOSGA027568-TA

Ensembl Protein ID

BGIOSGA027568-PA

Length

2730

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4652352..4655081

Sequence Coding Region

4655020..4655081,4654781..4654913),complement(4654576..4654679,4653729..4653900),complement(4653498..4653638
,4652352..4653425

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4652352..4655081 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4652352..4655081 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGTGGGTTCCGCGGCGCCAAGTGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACAGGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCCAGGAGGCCACCGCGCGAATCAGGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCGCGCAGGAGATTCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGACGCAAAAGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTCCCAGATGTGCAGATCTGCCTGAACTAATGCAAGTTCAGATGATGTTTGCAACTAAATACGGGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGATAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAGAGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTAAACCACATGAGGATCTATTGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTCCAAAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGTCTATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTCGCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACACGTGCCAAGCTCCCAGCCAACTTCTCATGAATTCTCAAACATGCCAAGCTCCCAACCAACTTCTCATGAATTCTTAAACATGCCAAGCTCCCAGCCATCTTCTCATGAATTCTCAAACATTAAAAGCTCCCAGACAACTTCTCATGAATTCTCAAATGTTCAAACCTCCCAGCCGGCTTCGCATGAATTCTCAAACCCAAGTGACTTGGAAGAGAATCCAACAGCTAATGCTGCTTTCATGACTCAGCCAAAAGGTTCAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGAAACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGAAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAACTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATTGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCATCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATCGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCGTCAAAACCTTGA</cdnaseq>

Protein Sequence

<aaseq>MLDAFFKGAGGGGGGFRGAKCKTLLKLSIPRIKLLRNRRELQLRQMRRDIAKLLEAGQEATARIRVEHIIREENMMAAQEILELFCELIAVRLPIIETQKECPIDLKEAISSICFAAPRCADLPELMQVQMMFATKYGKEFVAAATELMPDCGVNRQIIELLSIRAPPVDVKMKLLKEIAEEHEIDWDPSATETEYLKPHEDLLNGPTYFNGSTLPLPKEKHEETLAASAAEHPDEVYESDTGLESLDLPEVPKAAIRPPSDTPATPDIDTHVPSSQPTSHEFSNMPSSQPTSHEFLNMPSSQPSSHEFSNIKSSQTTSHEFSNVQTSQPASHEFSNPSDLEENPTANAAFMTQPKGSEHIPTPFAQPSMPVSPNEKKHFVPFASPPPFAVPSLVEKNESIPSPSPSPPVKPTDPEMFRTIDEVTPPPTTTDYLFSKQPEQLHSTSAENIANIDLDDVLSAAQTAAETAERAASAARAAANLAQLRIADLKKNSKAYENYSDSVRKESHHQSEVTQKPVFDHQDSFSSDTQGYVPSHLPQRSPSMEDDPYFSYPNLFSSKP</aaseq>

Gene Sequence

<dnaseqindica>1..62#169..301#403..506#1182..1353#1444..1584#1657..2730#ATGCTGGACGCCTTCTTCAAGGGCGCCGGTGGCGGCGGCGGTGGGTTCCGCGGCGCCAAGTGGTGAGGGTTTCTTTGAGGGGATCTTGGGTGGATTCGTTTCTTGCTGAGGATTCTTTTGATTTGTTTTTGATTCGATTTGCTTTTTGGTGATGGTGGGTGTGAGTAGCAAGACGCTGCTGAAGCTGTCGATCCCGCGGATCAAGCTGCTGCGGAACAGGCGGGAGCTGCAGCTGCGGCAGATGCGGCGGGACATCGCCAAGCTGCTCGAGGCCGGCCAGGAGGCCACCGCGCGAATCAGGGTAAGGATTGGTTTGTTGGTTGTGTTGAAGAGTGGGGGTGGATTTGGGGATCGCGTGATTTGCTTCTGGTTACTTACTTCTTGTTGCTGCGGCTGATGCAGGTGGAGCACATCATCCGGGAGGAGAACATGATGGCCGCGCAGGAGATTCTTGAGCTCTTCTGCGAGCTCATCGCCGTCCGCTTGCCCATCATCGAGACGCAAAAGTTCGTCCTCATCTTCTTTATATTATCATTCTATAACAGTAGAATTCACTAGTTTATGTGATGGTCATAGTATGGACTGTTATCTGTATAATCTCATCTAGATAAGGCCGATTTTCCGACGACATATGGCAGAGTCTATGGCTGCACGAAGATATTCACTTGCACATTTCTGGTTCAGAAACTCAAAAGATGTTGATTAACTGCATAATGTTAGTTCACCGCTAAAACAGATTATGGATGCTTTTGTTATTATTTCCTAGCTCATTCATTTGGTATGATGATGCATATTTGGTACAGACTACTCCTAAGCATCACTTTGTTTACATCCAATTTTCTAATACAAGAGAGAGAATTTTGATTATTACACCCTCTGCATGCTGGTATGTGGTAGTTGTCTATCTCTGCACTTGTTTTGGTCTGAATTCCCTGGATAGCACTAAGTACTTCTTTTAATAGGCATTATTGATTTTTTTCTAGTTTTTTTTTTAAAAATCAAATTCGTTCTTAAACTGTCCTTCTGAACGATTGTGTAAGACACATCAGTTACGGCTTTTACGTAACAAAACTATTGCAATATTTCATCAATTGGTGGGCTCAAATGTAGTAGTGATATCATTAATATGTGCATGCTACAAGATGAATGGGGCTGACTTGTGTTTCTTTTCACTCCTCCAGGGAGTGCCCTATAGATCTCAAAGAAGCTATATCCAGCATATGTTTCGCTGCTCCCAGATGTGCAGATCTGCCTGAACTAATGCAAGTTCAGATGATGTTTGCAACTAAATACGGGAAAGAGTTTGTTGCTGCAGCTACAGAGTTGATGCCAGATTGTGGGGTCAATCGGCAGGTCATACAATGAGTTCAACTGAAAGAAATTTAATTATGTTATTTGATCATTATGTTGTTACTGAAATAGCTGGAATAAATATTCCTGCAGATAATTGAACTACTTTCTATCCGTGCTCCTCCTGTTGATGTAAAGATGAAGCTGCTGAAAGAGATTGCTGAGGAGCATGAGATTGATTGGGATCCATCAGCCACAGAGACAGAATATCTTAAACCACATGAGGATCTATTGGTAAATATTTACCTACCAGAAACCATTTGTTAGCTGCTTGTTTTGAATCTTACATGTGTTCTCTTTTGCTAGAATGGACCAACCTACTTCAATGGTTCTACACTTCCTCTTCCAAAGGAGAAACATGAGGAAACACTAGCTGCAAGTGCTGCCGAACATCCTGATGAAGTCTATGAGTCTGATACTGGTTTAGAGTCATTGGATTTGCCTGAAGTCCCAAAAGCAGCCATTCGCCCACCTTCTGATACTCCAGCAACCCCTGATATTGACACACACGTGCCAAGCTCCCAGCCAACTTCTCATGAATTCTCAAACATGCCAAGCTCCCAACCAACTTCTCATGAATTCTTAAACATGCCAAGCTCCCAGCCATCTTCTCATGAATTCTCAAACATTAAAAGCTCCCAGACAACTTCTCATGAATTCTCAAATGTTCAAACCTCCCAGCCGGCTTCGCATGAATTCTCAAACCCAAGTGACTTGGAAGAGAATCCAACAGCTAATGCTGCTTTCATGACTCAGCCAAAAGGTTCAGAACATATTCCTACACCATTCGCTCAACCAAGTATGCCAGTTTCACCCAATGAAAAGAAACATTTTGTTCCATTTGCCTCTCCACCGCCATTTGCTGTTCCCTCTCTAGTGGAGAAAAATGAGTCCATTCCGTCACCTTCTCCATCTCCTCCGGTGAAGCCAACAGATCCAGAAATGTTCAGGACGATTGATGAAGTGACCCCACCTCCAACAACTACTGATTACTTGTTCTCAAAACAACCAGAACAGTTACACTCAACCTCTGCTGAGAACATTGCAAACATTGACTTGGATGATGTACTTTCTGCTGCCCAGACAGCTGCCGAAACAGCAGAGCGAGCTGCATCAGCAGCCCGTGCTGCTGCAAACCTTGCACAACTGCGCATTGCAGATCTGAAGAAGAATAGTAAGGCTTATGAGAACTACAGTGACAGTGTCCGAAAGGAAAGCCATCATCAATCCGAAGTGACACAGAAACCAGTATTTGATCACCAAGATTCCTTTTCCAGTGACACACAGGGTTATGTGCCTTCTCATTTGCCCCAGAGGTCGCCATCGATGGAGGATGATCCGTATTTCTCCTATCCCAATCTGTTCTCGTCAAAACCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027568