BGIOSGA027624

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Revision as of 07:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027624| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027624, complete gene.| tag = P0498E1...")
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Gene Name

BGIOSGA027624

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027624, complete gene.

LocusTag

P0498E12.102

Ensembl Transcript ID

BGIOSGA027624-TA

Ensembl Protein ID

BGIOSGA027624-PA

Length

4120

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3658280..3662399

Sequence Coding Region

3662282..3662399,3660486..3661508),complement(3660186..3660361,3659527..3659724),complement(3658280..3658921

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3658280..3662399 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3658280..3662399 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACCCTCTCCCCGCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAAGATGGTGATGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAAATTTTAGGAGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCATTTGACACAGTTTTACCAGCCTCCACATGTGGAGTGAACGCAAGTCAGCCTAGGGAATGGCCAGAAATTGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTTTCATATCCTTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGGATGGGAAGTAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATATCTGAAGCCAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTTAGTAAATCCAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGTACGGAGATCTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCAACTGCTGGCTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAATGCTATGTGGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACACAGTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACTGTTCAGCATTGTGGGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAAAACCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACATTGGTAAAAAAGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAATGCACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGTCTAAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAAGGGTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGAGAATTTGTCAGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCATGAGCACACTCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAAAAGGGTCCCATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCACCGTTTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGCATAACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTTGACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGACCACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGTTCACAGGGAACCGAGAATAAGCACTATGGATGAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTTGAGTGGCAATTCTGAATATGGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MTSSSTAAAAIQSASSSTLSPHAAPFALPVRPARAPLQDGDVSRSMDGSIVVHGLDNKILGDAHPSSSSATSCFRTQSFDTVLPASTCGVNASQPREWPEIGSDAAYPSSICSTSVVFSYPSVMMASNHNQKNPLYPGMGSNGSRCSTVKIESPPNKISEANKISCGLTSKSSMTKDVSKSNEDAVKNAPFPQILEVGTEICSKEASPVSHTRPLHISTAGSDPCDSMADGVKTEPSECYVDSPCWRGRGTSLSHQTSVTQLINQESEAFDAGQKKSTSTVQHCGVLTASQNLDTIENKQNQSQSHVELSVSMKSGDIGKKEEEVSHNKELESAKQCAAKCTAEQKHSLELRDNSVKRSGLNFAAPDFIPSSVGKSKIVKGSCSTTGRNTSGILKAMENLSEMLRDSCLLDENELDEHEHTLLQSVIENLQTCIDRKKKGPINDDGSNKAGLRAPHSQSTVLKSYAGDYRGSCTTNGGNGITVNKSVGPTRVLSDFGKNSLTWSQPSFNNIPRMISCEEDHSQILIYKNLWIDAERTNCELKYLLKQNRIKIGQESSMAHIGGPRNPSFQACDLGAGPSNSYGAAISYPPTLSFPKGDSTEETSRARNTDLLYTGDCIRLGDNSVPSCSASTISHPTRPNNFQGDLLTGLEETGLHHHAQPVPQLAPSRVHREPRISTMDEASGHSCFTGADGILSGNSEYGLSSDWEHVLKEEIGWS</aaseq>

Gene Sequence

<dnaseqindica>1..118#892..1914#2039..2214#2676..2873#3479..4120#ATGACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACCCTCTCCCCGCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAAGATGGTAACAACCTGCCCTCCTCCTCCTCCTCCTCCTCTACCCTCTTCTTGATTGTCTCTCATGCCCCGCCACCGCGCGTTCTTCGGCTGGTACGGCGTGTTCTTCCGCTCCCTGATGATCGGCACCGTCGATTTGGTGCGCGGGGGCGGGGGGGGGGGGGGGGGGCTTTGCGAAGGATCCGGTCTTTGTGTGTGGTTCATTCGCGTCAAGTGTGTGAGGAGTGAGGTTTTTCGATTTTCAGTTGGTAGAATTTAGTTGGGATTAAGTAGTACCTGAAACCGATCGGCGATCATCAAAATTTGTGTTATTGTTCTGCACTTTTGAATTTACTTACTCTCTCTCGGTTTCATCTGAGAGATGATTTTGTTCATTGAGTATCAAATCATTGGCGCAATAATGTGGATGTTTATTTGGGGCTATTTGCGCCGCAGTCTGATTTCATGCGATTATCCTATCTTATTTTCAGTTAGTATTACTTACTCCCTCCAGTTCCATAATTCTTGACGTTTTAGACAAGTTTAAAGTTAAACTTTTGTAACTTTGGTTGTTAATAACTTTAAAAGTATTTAGTTTAAAGGAACAACATTTATAGATTTATCTTTCAAAGTACTATAAGAAAAGTAAACATGCATTTATTTATTGTATATATTATAATAGAAAAATAAAATCAAAGATATATTTTGGAGATTGTGTCATTGTCCAAAACGTCAAGAATTATGGAACGGGAGGGAGTATGCATCATGGCATTGATTTCACGTTTGTTCTTGGATGCTTAGGTGATGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAAATTTTAGGAGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCATTTGACACAGTTTTACCAGCCTCCACATGTGGAGTGAACGCAAGTCAGCCTAGGGAATGGCCAGAAATTGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTTTCATATCCTTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGGATGGGAAGTAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATATCTGAAGCCAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTTAGTAAATCCAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGTACGGAGATCTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCAACTGCTGGCTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAATGCTATGTGGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACACAGTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACTGTTCAGCATTGTGGGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAAAACCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACATTGGTAAAAAAGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAATGCACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGTCTAAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAAGGTCAGTCTAACTCCATAAAAGTGCTTTATATGATCGTGCCTGTCTCATGATTTGTATTTCAAGTTATTATATCCTTTATTTTACTTCATATTCACAACCATGTTTAAATATTTGTCACATTCAGGGTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGAGAATTTGTCAGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCATGAGCACACTCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAAAAGGTGCATTGTTTGTGGTCTTTCTTTTAGTTCTTACTAGATTAGGCTTTCTGTAAAATGCGTTACTTTGAGCATGTGCACAACCTGCAACTTGTATTTTATTGGCATCTTCCTTCATACAACTCTTTCAGAAGATTTCATCAGCTCATCCATTTTGTTATTAGTAAAGGATTAGTTTAACTGTTAGTTTATTATTGTTAGTCCTCACATGTGTAGGATAACAAAGTTTATGATTATTGCTGGAGAATGCTTCCCAAATGCACATGCACAATCACCACCATCAAATGTTACCTTGAGTAGCAAAGTCCAAAACTGGAACAAACAATCCCACCTTCTCTTCATTATGATGTCCTTACACACAAACACTTTGGATGGGTAGGACAGTACATATACCCACATGATGCATTTCCATTTGTGACTTTCTAAATCAGTGATCCCATAATATTTTTTTCAATTCTTTCTAGGGTCCCATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCACCGTTTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGCATAACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTTGACATGGTCCCAGGTATTCTTTTGTACACATAGTAGCTCGTGCTGTTTGTGAAAAATGTGCAGAGGGTTTTCCAAAATGTTCTTTAAAATCTTTATAAGCACAAAAAGGTCAGTAGTAATTTTTACAAGATACAGTATATGACAGAGTTTGAGCCTGCAACATTTTGTTAGGAATTTACCCCCTTTCCTTTGTCTATAACCTTCTTATTAGTTGAGTAAGTTGCACTTTGCAATGGGTAAAGTGTACCTTGTTTTGCTTTGCACCAGATTTAGCACATACTTTCAATTTGCGCTTATTGATTTCACTTAACACCTGGATGCATCATTCAATCTATAGAAATGTCATGGCATTTCATAAAATCTCGTAAAACATGGTCTAAATTCAAAGAGTTTCACAGGTTGTACTCATATTTTTCGAGATTTCTCTTCAATTATATGATGCTACCTAGTGCCATGTGAAGCTTATTTCAATATACCCTAGTTTAAAGTGAAAGTATGAACTAAAACTAGTGTAAAGTGAAACAAGGTATACTCTACCCGGTAGGCTGGTACAATGTGCAATTTACTCTCATTTAGTCTAGTACACTTTCTTACAAGCTATTATTAATGTTTGGCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGACCACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGTTCACAGGGAACCGAGAATAAGCACTATGGATGAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTTGAGTGGCAATTCTGAATATGGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027624