BGIOSGA027628

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Revision as of 07:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027628| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027628, complete gene.| tag = P0438H0...")
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Gene Name

BGIOSGA027628

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027628, complete gene.

LocusTag

P0438H08.25

Ensembl Transcript ID

BGIOSGA027628-TA

Ensembl Protein ID

BGIOSGA027628-PA

Length

5004

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3584751..3589754

Sequence Coding Region

3589009..3589754,3588290..3588358),complement(3587316..3587423,3587042..3587222),complement(3586872..3586951
,3586663..3586782),complement(3586298..3586403,3585972..3586058),complement(3585792..3585860
,3585606..3585677),complement(3585358..3585510,3584751..3584861

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3584751..3589754 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3584751..3589754 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTACCGGCCGTACGCGCCGCACCCGCCGCCGCCGCAGGGTGGGTTCCCGCCGCAGCCGCCGCCGATGAACCCGTACGGGCCGCCGCCGCCGCAGCAGCCGGGGTACGGCCACATGCCTCCGCCGCAGGGGGCGCCGCCGCCGTTCCTGGCCCCGCCGCCGCCGCCGCCGCCACCGGGCCCGCCACCGCCGCACCAGCCACAGTTCAACTTCGGCCCTGGTCCCCCGCAGCAACAGCAGCCGCCTCCGCCGCCGCAGATGTACTACCGGCCGCCGCCGCCGCCGCCGCCGTACGGCGTGAACAGCAGCCAGCCGCCTCCTCCGCCCCCGCCGCCGCCGTCTCCTCCACCTTCGGCGCCACCCCCGCCTCCACCTCCTCCCACGCAGCCGCCTCCTAGGGAGGCCCAGCTTGCTCCGCCTCCACCGAGGGAGCAGCAGAGCAAGTCGGCGCTGCCAAGGGCGGAGACGGAGGAGGAGCGGCGTGCTCGGAAGAAGCGAGAGTACGAGAAGCAGCGGGCCGAGGATCGGAAGAACCAGCAGATGATGCGGCAGTCACAGGCCACGGTTCTGCAGAAGACGCAGCAGGTGCGCGCCGCCCAGCAGCCGCAGAGCCGCCACCATCAGCAGCCATCGGGCGGGTCCCGGCCAGCGGTGACCGCGACTCGCCCCGCCGCAGCTCCCAACGCCGAGAGATTTGAGAATCGCCTCAAGAAGCCGACGACCTTCCTCTGCAAACACAAGTTTAGGAATGAGCTGCCAGATCCAAGCTCTCAGCTAAAATGGTTGCCACTGAACAAGGATAAGGACCGATATACCAAATACAGAATCACTTCATTGGAGAAGAACTACATACCCAAAATGATTGTCCCCGAGGATCTCGGAATACCTCTTGACCTACTTGATATGAGCGTATATAATACTCCTCCTGTTCAGCCACCCATGGCTCCAGAAGATGAAGAGCTATTGCGTGATGATGAGGTTCTCACCCCTGTTAAAAAAGATGGTATAAGGAAAAAAGAGAGGCCCACCGACAAGGGTATGTCTTGGCTGGTCAAAACACAATATATTTCGCCACTTAGCACCGATGCAGCAAAAATGTCCATTACTGAAAAGCAAGCGAAGGAAAGGCGAGAATCAAGGGAGGGCCGAAATACTTTCTTGGAAAATATTAATGACAGAGAGAAGCAAATTAAAGCCATTGAGGACTCCTTCAGGGCAGCTAAATCACGCCCTGTTCACCAGACTAAACGTGGGATGGAAGCAGAATGGGTTCTGCCTTTGCTTCCTGATTTTGATAGGTATGATGATCAGTTTGTTATGGTGAATTTTGATGGAGATCCTACTGCCGATTCAGAGCAGTACAACAAGCTAGAGAGATCTGAGCGTGATGAATGCGAATCCCGGGCTGTGATGAAAAGTTTTCTTGTCAATGGTTCGGACCCTGCAAAACAAGAGAAATTTTTAGCATACATGGTTCCATCCCCCCATGAGCTTAGCAAGGACTTGGATGATGAAACTGAAGATATTCAGTATTCCTGGCTTAGGGAGTACCACTGGGAAGTAAGGGGGGATGACAAAGATGATCCCACGACATATCTTGTCACATTTGATGACGATGGTGCAAAATATTTGCCTCTTCCTACTAAGCTAGTATTGCAGAAGAAAAAAGCAAAAGAAGGCAGATCTGGGGATGAAATTGAGCATTTCCCAGTGCCCTCCAGGATTACTGTGAGCAGAACAGCTCATGGTGGTATGATGGAACATGGAGAATCTTCTAGCATGCATGAGAATTTGAAGAGACAAAGATCTTCGGTTGATGATGATCTCTATGACCATCCTAAGCATTCTCGAGTAGAAGATATGGATCAGTATAGTGGAGACGAATATTCTGACTGA</cdnaseq>

Protein Sequence

<aaseq>MASYRPYAPHPPPPQGGFPPQPPPMNPYGPPPPQQPGYGHMPPPQGAPPPFLAPPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYRPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPPREQQSKSALPRAETEEERRARKKREYEKQRAEDRKNQQMMRQSQATVLQKTQQVRAAQQPQSRHHQQPSGGSRPAVTATRPAAAPNAERFENRLKKPTTFLCKHKFRNELPDPSSQLKWLPLNKDKDRYTKYRITSLEKNYIPKMIVPEDLGIPLDLLDMSVYNTPPVQPPMAPEDEELLRDDEVLTPVKKDGIRKKERPTDKGMSWLVKTQYISPLSTDAAKMSITEKQAKERRESREGRNTFLENINDREKQIKAIEDSFRAAKSRPVHQTKRGMEAEWVLPLLPDFDRYDDQFVMVNFDGDPTADSEQYNKLERSERDECESRAVMKSFLVNGSDPAKQEKFLAYMVPSPHELSKDLDDETEDIQYSWLREYHWEVRGDDKDDPTTYLVTFDDDGAKYLPLPTKLVLQKKKAKEGRSGDEIEHFPVPSRITVSRTAHGGMMEHGESSSMHENLKRQRSSVDDDLYDHPKHSRVEDMDQYSGDEYSD</aaseq>

Gene Sequence

<dnaseqindica>1..746#1397..1465#2332..2439#2533..2713#2804..2883#2973..3092#3352..3457#3697..3783#3895..3963#4078..4149#4245..4397#4894..5004#ATGGCGTCGTACCGGCCGTACGCGCCGCACCCGCCGCCGCCGCAGGGTGGGTTCCCGCCGCAGCCGCCGCCGATGAACCCGTACGGGCCGCCGCCGCCGCAGCAGCCGGGGTACGGCCACATGCCTCCGCCGCAGGGGGCGCCGCCGCCGTTCCTGGCCCCGCCGCCGCCGCCGCCGCCACCGGGCCCGCCACCGCCGCACCAGCCACAGTTCAACTTCGGCCCTGGTCCCCCGCAGCAACAGCAGCCGCCTCCGCCGCCGCAGATGTACTACCGGCCGCCGCCGCCGCCGCCGCCGTACGGCGTGAACAGCAGCCAGCCGCCTCCTCCGCCCCCGCCGCCGCCGTCTCCTCCACCTTCGGCGCCACCCCCGCCTCCACCTCCTCCCACGCAGCCGCCTCCTAGGGAGGCCCAGCTTGCTCCGCCTCCACCGAGGGAGCAGCAGAGCAAGTCGGCGCTGCCAAGGGCGGAGACGGAGGAGGAGCGGCGTGCTCGGAAGAAGCGAGAGTACGAGAAGCAGCGGGCCGAGGATCGGAAGAACCAGCAGATGATGCGGCAGTCACAGGCCACGGTTCTGCAGAAGACGCAGCAGGTGCGCGCCGCCCAGCAGCCGCAGAGCCGCCACCATCAGCAGCCATCGGGCGGGTCCCGGCCAGCGGTGACCGCGACTCGCCCCGCCGCAGCTCCCAACGCCGAGAGATTTGAGAATCGCCTCAAGAAGCCGACGACCTTCCTCTGCAAACACAAGTGAGTGGCACAAAGTTTTGTATTCTGTGATTATCAGAGTAGCTATTGGAGAAAAGAGAGTGTATTAGGTCGTAGAAGTTTATGTTTTCGGCAAAACTGTAGTAATTCTTAGCTAACACTTTTGGTCTTACAAGTGAAGTGTGTGTTTTGATCAAACTTAAAGTTATTCTTAGATACAGTTTGGTAGTATTTTGGTTGGTTTATGCCTTAAGAGCAACCTGCGCGGTTGCTAAATGCTGTGATGCTGGACTAGTGACAAGCCGCAGCTGCCTATTAGATGTTCCAAGGCAACATATGGTGTAGTGGCATTAAGATGCAAATCAACCATTTTATTTTATTTTATTTTTATTTTTTACTTTTAGTTCTTTATGCTTAATTCGAGATAGTCACTTAGAATACAGTTCATAGTTCTTAAGAGGTTGATGGGTTATGCTTGTCTTTAGTTATTTCTTTTTATAAAATTAAAAGAGGAGCCCTTTTGCGCTGTGAAAAAAATATAGGTGAAAGTATTGCTGTAGTGATGTGATTGGCATTTTCCCAAATTTAGATACTTTCCAGAGCAACTGATGTGCATGGAATGTAATATTGCGATTATGTCTCTATTTCAGAATGGAACTCTTTGATGAATCTTTTGTTATGGATTGGTGCAGGTTTAGGAATGAGCTGCCAGATCCAAGCTCTCAGCTAAAATGGTTGCCACTGAACAAGGATAAGGACCGGTATAAAGAACTACTTGTCTACTCTCCTTTTTCTCGGATTGATTTCTATTGTTGCTTGTTGTACTGGTGATTAGCAATGCACCTGTTACAGTACAAGCCATTTCAATGTTGTTTATCTAGCTTTATCATCTTCCGATTTGAAGATAACTTTGTGTCAAGACAACTGAGGTTGGTCATTTACTGATCATAGAGCGTAAGTCCTTTCTTTGTGTGTTGCCACTAAGTGCCCTTCATTTGTTGTTAGAGAGTACTCTCCCAAATTTTCGGTCATTTGGGCAGCTTGAATTTAGGTGTAGTAGACCGAGCAGAAAATTGAATTATTCCATGTTCCTTTAATTTACCATGTCATTTTGTGAGTGCTGACGATTAGATCTTTGTGAAGAATTTATCTTCACAAAAAATCACTTCATGATCCTTGATGAAGTAGGTCAAGTGGTGGTATTGGAGCGTTATGCAGCAGCCATGTTTTTCATGGCTTGAAGGATAAATTAAGTTAGAATATTTCTGGTAGTTGTGTAATTCTCTTGACAGGAAATGATTGCCACATTCTGGTTTATGTATGGTTCCTGAAGCACACTGTTTCTTAGAAAAACAGTCATTATCACTAGCTACTTCATTGTGTATGAGAGCTTGCCAGTGCACCTTTGTTACACCTACACAGAGGTCCTGTGCCATTTGCTTTTGATTTTTTTTTTCAATTTGCATAGCCTCCTCTGCTTTTCACTTTTATTCCGCTATCCAGAACATTAGTCTGTGTTGAATTTTTCTGTTTCTCTCTACTGTTCTTCACCGTGCATGGTGCTCTTAATATTATTTTAGGATGTCTGTGTTCACTCTTTGTTTTGCTATCCGCTACCTCTTTGCAGATATACCAAATACAGAATCACTTCATTGGAGAAGAACTACATACCCAAAATGATTGTCCCCGAGGATCTCGGAATACCTCTTGACCTACTTGATATGAGCGTATATAAGTATGAATTGAGCCAGATATATGTATTCTTAGCTGCTATCCTTATAAGAAGATTCTTTTTAGCATACCTAACTTATGCACAAACTATTTTTAGTACTCCTCCTGTTCAGCCACCCATGGCTCCAGAAGATGAAGAGCTATTGCGTGATGATGAGGTTCTCACCCCTGTTAAAAAAGATGGTATAAGGAAAAAAGAGAGGCCCACCGACAAGGGTATGTCTTGGCTGGTCAAAACACAATATATTTCGCCACTTAGCACCGATGCAGCAAAAATGGTAATGCCAACCATCCTTCTGTAGATTTAGTTACAGAGGTTCTGCTGGATTACTTTATACATATTATATAAGCTTGGTTGGCTATTCCAGTCCATTACTGAAAAGCAAGCGAAGGAAAGGCGAGAATCAAGGGAGGGCCGAAATACTTTCTTGGAAAATATTAATGACAGGTATGGCTTCCTTTTACCTAGCTCACTCACCCTGTTTTGCAAACCTGGTCTAGCCAGTGACACTACTTCTCTATGCATTTGTATACCAGAGAGAAGCAAATTAAAGCCATTGAGGACTCCTTCAGGGCAGCTAAATCACGCCCTGTTCACCAGACTAAACGTGGGATGGAAGCAGAATGGGTTCTGCCTTTGCTTCCTGATTTTGATAGGTTGGGCTTGATACTTTGTTTTTTCAGCGTGTTCTTCATATCTAAATAGAGAAAAAAGCTATTTGATTTCCCACCTACTGTAATGTCAAGATAGTCTACTGCAAAATCTATTGTTGCTGTAAAAAGTTATATGATAGTAGTTTTTGTTATTTCTTTTGGTTTTCGTTTCTAAGGTATCACTGAACAAAATGTTTGCCTTGGATTGATAAAAGTGTTACATTTTAATTGATATTGGGTTCACAATTTTGTTGATCTTTAGGTATGATGATCAGTTTGTTATGGTGAATTTTGATGGAGATCCTACTGCCGATTCAGAGCAGTACAACAAGCTAGAGAGATCTGAGCGTGATGAATGCGAATCCCGGGTGAGTTGTTTTTTTCTTTTTGGCTATTTTTTTTTCTGGTGTTCTCATAACTCTAGGTTCCATTGCAACATGTATTTAATATGTTTGAGCTGATATGGGTGCATCTACTTTTTAGAGGCGTAGTGATGTTTCTCAGAAAGCAATATGCATTTTAGATCCATATATTTTTGGATATGCCTAATACTCCACCTAGTAATACCCTTGAGTATCATCGAGACATTTTGATGCTTCCATGACAGGCTGTGATGAAAAGTTTTCTTGTCAATGGTTCGGACCCTGCAAAACAAGAGAAATTTTTAGCATACATGGTTCCATCCCCCCATGAGGTATCCATCCTTTTCTAATACATATGTATTTGAAATATCATGTAGCATGTTTAGTTTTAGTTTTTACCAATGGTGCATCAATCTCATGGTGATTATCGTGGTTTCCTTCAGCTTAGCAAGGACTTGGATGATGAAACTGAAGATATTCAGTATTCCTGGCTTAGGGAGTACCACTGGGAAGTATGTGGATATTTTCTACTGTTTCTGCTATCTTCTTTAAAAAAAGAAAAAAAATGTTAGCTGGTGTAGAAGTGCTCTTCCGTTTTACTTATCTTATCTTGTTTCATGGTCCAGGTAAGGGGGGATGACAAAGATGATCCCACGACATATCTTGTCACATTTGATGACGATGGTGCAAAATATTTGGTAACTTGCTCTATGCATATTATATTAATTTTGATATGTGAGAATGATTTATTGCACGTTTGTGAACATATGGCATTTTTATGTTCTTTTTGCAGCCTCTTCCTACTAAGCTAGTATTGCAGAAGAAAAAAGCAAAAGAAGGCAGATCTGGGGATGAAATTGAGCATTTCCCAGTGCCCTCCAGGATTACTGTGAGCAGAACAGCTCATGGTGGTATGATGGAACATGGAGAATCTTCTAGCATGCATGTACGACTTGTTCTCCCTTTATGATTGTTGGCTTGACATCTCGGTATTCAGCAAATTATTTAGTTGTTCACTAGTTCTATACTAGACAACATACTGCTGCTAGCTAACTTGTTTATTCTACAATCTTTGTTTTATTACTGCCTTTTTTTGTAACACAGGATTTTCTCAGACTAGTTAAAAAACATAAGACGTGAAATTTTCCTGTTCGTGCTCACCTATCGTATTCTCTCTATTATAAGTAATGCCTTAATTAATATTCTCTTCCCAGTTTCTAAGGTATTCAATTAAGATTTCACTGTCATATGTATTCTCTTTATAGGTTTCTTATCCACCTTAATCCACATGCCAACTCAAAATAATCTTATAAGTATTTTCTGCAATTGGTTCATATTGTAGCTATGAAATAACACTGCTGCTCTTAGTATGTTCACATTTTTGTGCAAAATTTGCTACCTTCTAACTAAAGTTCAAGATATTAATATTTTCTTCCTTGCAGGAGAATTTGAAGAGACAAAGATCTTCGGTTGATGATGATCTCTATGACCATCCTAAGCATTCTCGAGTAGAAGATATGGATCAGTATAGTGGAGACGAATATTCTGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027628

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027628&oldid=33885"