BGIOSGA027629

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Revision as of 07:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027629| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027629, complete gene.| tag = OsI_278...")
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Gene Name

BGIOSGA027629

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027629, complete gene.

LocusTag

OsI_27876

Ensembl Transcript ID

BGIOSGA027629-TA

Ensembl Protein ID

BGIOSGA027629-PA

Length

8430

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3566613..3575042

Sequence Coding Region

3574650..3575042,3568853..3569072),complement(3568285..3568467,3568107..3568195),complement(3567872..3568000
,3567692..3567786),complement(3567478..3567540,3567314..3567390),complement(3567116..3567243
,3566613..3566747

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3566613..3575042 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3566613..3575042 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCGGCCGACGAGGAGGCGTGCATGTACGCGCTGCAGCTGGCGTCGTCGTCGATCCTGCCGATGACGCTCAAGAACGCCATCGAGCTGGGCCTGCTCGAGACGCTGCAGTCCGCCGCCGTCGCCGGAGGAGGGGGGAAGGCGGCGCTGCTGACGCCGGCGGAGGTGGCCAAGAAGCTGCCGTCCAAGGCGAACCCGGCGGCGGCCGACATGGTGGACCGCATGCTCCGCCTGCTCGCCTCCTACAACGTCGTCAGGTGCGAGATGGAGGAGGGCGCCGACGGCAAGCTCTCCCGCCGCTACGCCGCCGCGCCGGTGTGCAAGTGGCTGACGCCCAACGAGGACGGCGTCTCCATGGCCGCCCTCGCCCTCATGAACCAGGACAAGGTGCGGGCGAGGATCGAGGTGGCGGTGCTCAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGAGCCAAAAAAAGTGTGTTTGATTCGTTCTCATTTGCTCTTGAGATAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGGCATGTCAACCAGACTGTTCAAGATGTCGTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGTTGCAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCATGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTACAGGGTGATTACATTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAADEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVAKKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVRARIEVAVLNFLAALTDPAAPAISALPLISRGAANRGLRRALLRDDVSSVYLSYASCKRSLTRANDAKAFVRAKKSVFDSFSFALEIVWKVMEMCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIMASSRGALIGRLVLQGPEEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKFLQDKHRAELTLMLETGKRAEIEALYSHGFDFLGKYVARKIVQGDYI</aaseq>

Gene Sequence

<dnaseqindica>1..393#5971..6190#6576..6758#6848..6936#7043..7171#7257..7351#7503..7565#7653..7729#7800..7927#8296..8430#ATGGCCGCGGCGGCCGACGAGGAGGCGTGCATGTACGCGCTGCAGCTGGCGTCGTCGTCGATCCTGCCGATGACGCTCAAGAACGCCATCGAGCTGGGCCTGCTCGAGACGCTGCAGTCCGCCGCCGTCGCCGGAGGAGGGGGGAAGGCGGCGCTGCTGACGCCGGCGGAGGTGGCCAAGAAGCTGCCGTCCAAGGCGAACCCGGCGGCGGCCGACATGGTGGACCGCATGCTCCGCCTGCTCGCCTCCTACAACGTCGTCAGGTGCGAGATGGAGGAGGGCGCCGACGGCAAGCTCTCCCGCCGCTACGCCGCCGCGCCGGTGTGCAAGTGGCTGACGCCCAACGAGGACGGCGTCTCCATGGCCGCCCTCGCCCTCATGAACCAGGACAAGGTCCTCATGGAGAGCTGGTCAGTTCATTTTGTCTCCTCCTCTCTCGCTGACATGTGGGCCCACCCCTACATAAACCTTCACAAATAAAACCCACTGTGCCAACTTCCATTTTCAAAAGGAGTTAGTTGCAACAAGCATATCAAACCTTGAATTTCATTGTTTTTTTTAGTTTCCTTTTAGAACCTTGAGACAACATGTTTTTTAGATGATAGGATAAAGGAATATCCCCGGCCTCTGAATCATATGATGCACGTAATCGATTTTCTAAAGAAACTAATTCCATGAAGAAAAATCGTTCTTACACGTATAAATAGCACCGACAGGCACGTAATCGATTTTCAATACATATGCTAGAAAAGAAATTAATTCTCTGACGAAAATTCGTTCTTACGTACGTATAGCACCGACTGATAGCCGCTACGGCATAATTATGTGCACTTAGAAAAGGGTGTTGGTGACCCTCCTCTAGTAGTGGGGGGTGATGCTAGCAAGCACTAAACTTGGTCACCAAACAGCTGAGGAATATGAAAAGAGGGGGGAAAAGGTTGAGCTCATCTTCCTTCTAGAGAAGCAACCACAGCCGTCGATCGCCGAATCGACGGCGCATAGAGATCCCTTCCCAATCATCCTAACATGTCATGCTCAAAATGCATGATGGAGAAATCTTGGCTGATCTGATCAGCTGGCTTGGTGTCACAAACTGATTCTCCACCTACCTGTAGAAAATTCGGTAGTGTTGTGTATATATAGCCAGTTTGTTTGATGTGGACAGAGTACTAGAAATCAAATAAGCTTGTGTGACTTTTCCTGCATGCCTTTGATTATTCTTCTAAGATTTTGGGGTTCAGAAATTCAGGTAGAAAGTAGAAAAAAGAGTACAGTAGTTATTATTCAGAACATCCTGTGCAAAGCCCAAGCAAGCTGTACCTTTTTAGTGGCAAGATTGCAATGGCATGTAGGTTGGTTAGTAGGTAGTGCGTCTAGACAAAGACACATCAGTAGCAACAGCAGCAGCTGAAGGAGGAACATCCATCAATTTCCTACCAAAACAATCCACTCACAGCCTCACAGGCATTCAATGGATGCGTGGTGTCAATTCTAGAATTTGAACCCCGTTGAACAGCCGACTTCTTTCTCATTTTCTCATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCAAATCGGTATCATTTGCTTCTCTGCAAGTTCTAGCCAGAGGATGCACCTCAAATTTTGGTGAAAAAGTTTTAAACATGTCTAAATTCTGGGCTACACATCCACCAAACATTGTAAAGAAAGCCAATGGCGAGGCAGAAAATGAAAAGACTTCTTATTCTGGTACAACCATCCGGGTTCCGTCGCTTCCGCCTCTACTACCAAGAACCATCGATGTATATAAAAATTAGTCGATCACTAGGAAAAAAACTACTAATCATTCAAGTTCGACGGTGTTATTGTCTCTGTTACCGGTTAGGCATGCCAAAATTAGATATTACTTGAAGATTGCCTTATAATGCATAAAATGACTAAGAGCACAAGGGGGGAACTTAAAAAAAGAGTTAAAACAAAATTATGGACTACTTTATGAATTAGTTTATTGTTGTTGTACATGTTTTCATGAATCAGAAGGATTATTAATTTCTTTTAATAAACTGACTTGATAAATCGCAACCCAAAGACTGGTGAGGAGGATGGTGGAGGATGATCTCCTAGCCTTTGGTGGGTCCCATCCATGAGGGTCTGCCGGTGTAATGTGGGCCCACAAGATTGACAAAATGCTGTTATTATTTTTATTATTTGCATTGGCATTATTTCAACCGGTAGAAGAATTAAGCATCTCTCTCTCCCCCTTTTGGTCCTTATAAAACCGTGTTTAATTAACCGAAGAATAATTTAAGTAACTAATAATCAAGTAAGTAGGGTGAGTAGGGTAGTGATGCTTGCTCAGTGTGTGAAGTGCTTTCTGCTCTGCTTTTGTGAGGCCAGGGTACACAAGGTTAAACAGGACACTCCACGTGATTCTGCCTCAGGACAAGGTGAAAAAAACACTATATATGTGTCAAAGTGGCTACATAGAACTCACACCAATTATGAAGAGAGAGCAATGGAGATAGGTGGTGATGATGATATGCACGTTTTTTTGTTTGTGTTGGAGTAGTAGACAACTGGACGTGCAGAGGCGGAGCCACGAAATTTCTATGCTTGGGACTGTATGATATATCGCACGATATATACTATCTTCTTCTAGTTAGAGTTATACCAGTATCAAATGAGCATTAAATTAGCGAGCATCGAAATGAGAGGGCACAAAAATAACCCCAACTATGAATTTTAACATGTTTTATATGTGTTGTGGTAGGGGTTTAGAATACAACTATTTATCATAAAACATAATAAACCAACGACACTACATTGGTGACACGGAGAATAACATGCCGGCGGTATTTGCTTGCCAAAGGGACCAAAAGCAGTGACCAGTATTTTGACCATCCGGTTAATGATATTTGTCCACTCAATCTAGCTACCTGATGCTCGATCCAACGTATAGGAATCACGAAACAGCGAAGAAAATAGAAGAAAATAGAGAACATACACAATTAAAATAATTCTAAATATATCCTAACAGACATGATCCCTGTTGAAACGCATGGCTTGCCATCCACACACACATGACACTTATGTAATGAATTAAAGTACATTGTTTTCTCTCTTGTGGCAGGCAAGAAGGCAGGTAGCTAGCTATATCTCTGGTTGATGGGCAATTGGGCATATCATCAGCATCATCACCACCGATTTGTTTAAGTGAAGGAGGATTTTGGCAGTCTTTGGGCCGGTGTTCATCGTATCTCGCACGCACACACAGGACATGGAGGGCATGATCATGATTAATCGCCGCACTTAAGGATCGGTTGAATGAGGACGAGCAGGGCACTAGCTTAATTAGTTAATTTTGTTAGCATTTCTTGCATAAACATATGCAAGTAGCTCAATTATTTGGATCTTTGGCCTGGTTTAGATGCTGGTTATGGTTAGGATTGTGTGGTGGTTTGTTTCTGATTAGTTGAGGTTTGGTGCCGCTTCTTCTAACTTCTTTTTCTTTTTTGAGAACACTTCTCTTCTCTTTCTCTTTTAAAGAAAATGGGTACTTTTCTTTTAGTAATATATGTTGTGTATGAGGCACTACTATAAAATAGGGGCCTATTCACTTTGATGTAAAAAAAAACCTTACCAAATTTTAGCAATGCTAAAATTTTGGTATTTGGCAACTCGCCAAAATTTTGGTAGGATTTCTTATATAGTTACTAAAATTTGGCAGCAAACTAAATATAGCAACTTTTTTTAGCAACTTTACCAAATTTGGTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAGCCCTAGCTAGCTATAGATCCAACATCTCCTCTCTTCCCTTCTCTTCTCTTCACTTCACTTCACATCAACTTTTTCTTTGCTTTTCTTTTTTCTACTTTACTTTCTTCTTTTGTTGCCTTCACCTCCTTTTTGTAATTTTGCTTTCTTTCTCTTTAATTTTTCTCCCTCTTTTTCCTTCTTTTTTTTTGAGGGTTTCCTCTCCCCTTGTCATTAACTTAATTTGTAAGGGGGGATTAAGAGAGAGAGATGTGTACATACCTGCCTCCACTTTGACAAATATTGGAATAATAATTTATAATGATGATGATGATGATAATATAGTACTATTAGTAGTTTGCCTGCCTCTCACATCACCACTAGATGTGTGTGTGCGCTTGTGCCTCACATATATCTATGTGCTTTGAGTGATGTTGTAATGTATGTAATGCAAAGTACTAGTGTGATTGTATATGTAGGGGGGATGGGGATTTCCCATTGGGGATTCCAATAGATATGTTGCTCTCTTGTTTAGGTGTTAGGCATCACGTCACTCTTTAGGGGGGACAATTAGGATAAGCTCGCTTAAAGCAACGTGCTAATTAAGGCTTAATTAATCATCACCACTTGCAAACTAGGATTAATACTTCCCTTAATATTTAGAAAATTAGACATGACGATGTTTTTTTATCTCCATTTAAGCTTTTTTCTTTCTTTCTACAAGGTATTTTCAAGCCCTCGGATCTAATATCGCCACAATCTAAAATCTAGATAAGGTTCATGCTATCTTGAAACTTTGTGAGAATTTCCATACCAACCGAGGGAATTGAAGCATCCTGAGCTACCAGATAAGGCTTCTAAATGACCGCTCAATGATGAAGGATATGGTGTGCAAAGACAACTAGAAGGTTCTATGTTAAGGCAATGGGAAAAGATTTTTCCTTTTATTTTAGGAATTTTGGGAACATTTCAGCAAAGAAAGACAAAATTTTAGGATCCACTTGAGTTCGTTTCGGAAATGGAATAAATCTCGGTGAAATTTCATCCTAGATAGTGAAATCTCGTGATTCCGAATCCTCCTGAATGTATTTTTACTCCACAAAAGAAATTCCAATCAGACTTAGTTAGGACTGAAACTCCAACGTTTATCTTTTTACAAGAAAACAATGTATTGTACCCCCACAGCATAGGTGAAATCATATTGAAGGGATGCAGGTACCATGAATGAAGAAAAAAAAATACTTGTAAAACATCTATCTTTGAATATTATTTCTCTCGCTGAAGGCAAAATTGTTTGGTTGTAGCTTATGGATGCTAGTTTAGAAAAAAATGGAATATAGTAAATGACAACCTTTATTCGTTTTTTCTTCTGAAAGAAAACATAATGTGTTGCAATTTTTTAGTGCCCTTGCTGTTATGGTTGGGACCAGATGAATCGGGTTCACGAGGGCATAATGTGCGTCACCTAAATTTGTTCAGCGCCATCAATTTTTTTGCAGTGGGGTCCTTGTTGCAATTAAAATCTGGAGCATGCTCTCTGGCTGTACCATTGCTTTTTTTTTTCGTCAGAGCTAAGGTTTCGTTAAGCACCTAGCTTAGGACCCCATTACACTGTACCTAGCTAAATGTATGGGGTGCTAGTAGAATTTATTGTGGTAAAATTAGAAAAAACAATTACACGGTGAAATGGTAAATTTGGATGCATTTTCGTAATACTTTTTTTTGCACTTTTGAAGCCGAACAAAATGTCTGAAAAACTCTGGTGGAAACCAATTGGGTAGATTTAACGTTTTATTATTGCATATGTAGGCATGACTGAAAACTTCTTTTTGTTGAAATGAAAAATATTACTATCGTAACATGTTGTTAATTTTTTTCAAGACAAAGTACGTGTGTGATCTTACCCATATGAGCACATCCGATAACTAGGATAGCATCGTTGACGGAAAAGTGGTCTATCTTTGAAAGAATAATTAAGCGTAAATATAACTATATAAGCGCATGTATCAAGTATAGGACTTAAATTAGGTGGACAGTCTCTGCATAGGAAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCCGACCGAGCCGCGGCAAAGCTGACGTCACGCGGTCGAATCCCGGCAGGTGCGGGCGAGGATCGAGGTGGCGGTGCTCAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTTAGAGGTTGCCTCTTGATGATCTCTTCCATCTTATTTTTAAAAAGTAAATTTCATATAACCATAGTCTCAGTTACACAAATCCACGAGGATTTTGACAAAACCACGCTATCGATCATTTTGACTTTAATCTACCGTACATTTAAGTTCTGTGCAATTAAATCTCAAATTTATGAGTTCATATGAATGTGACATCCATGTAAATTTTGACGTGGGAGTGTTAAATTGGTTAACGACGTGGTTTTGTGAAGCTTTTAAGAGCATAATACCCGGGGTTATTTGCAACGTGTCAAAATTTCTATGGTTTTGTACAACTTGGACTATAATAGGTGTGGTTTTGTGAAATTTACTCTGTTTTTTGAAACGATGATATTTTCCATCTTCAACTTCAGCCAAAAAAAGTGTGTTTGATTCGTTCTCATTTGCTCTTGAGATAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGGCATGTCAACCAGACTGTTCAAGGTCCACGCATTTCTGAATTCTGACTCCATTTTTTTTGTCAGTTGCTCTAACTTGGTGTCTCATAATGTTTGTGCCGTGTTCTTGCGCAGATGTCGTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGTTGCAGGTGTGCCTCATCCCATGCTATGATGAGTGGAACATGTGTTGCATATTGATTGCATCTCTTGTTTATCTTGCAGCAGCAGCCTGAACCTGTGTTTAAATTGTCCTAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAGGTACTCTCTTTGCTTGTGCAATCTAGTGGTATTGTATTGCCCCCTCTTAGTTACTTCCAGCTGATCGCTCGCTGGTTTGATATAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCATGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTCTGTGCCTTAAATGTGCATTACTCTTTTCTTATCTAAATTTGTCCAGCTTATGTGATAGAGAATACTCTCAATGTGACCATGATATTGTCAACATTATTAGGTTATCTTGTATACTTATACTATTTGCTATTCAATGTTCTGGAACAGGTTTATCTTGCATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGTTTGGTCCTTCCAAGTGCTGATGTATAGCTGACTTTCTCTTTATATTTCAGGTGAAGTTAGTTTTCTTTTTTTGATCATTTTTCAGGAACCCAGCAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGGTACTTCCTTTGAGTGATCGATGTTTGATCATGCCAAATTTTCGACAAAAATTAATGTTGCTTTTTACAGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTGCAGGTGAGTCTGCTAACCCTCAACTTTTGGACTATGTAGAAGTATCTGGAACATAGAATTAAAACATGGATACAACTGTGCAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCTGAGATCTGTTACATGCCAATACTGTCTGGCCTTCTTATAGGCAGTGTTTACCCCAGTGGGTGAAAAAAAGTACTGTTCTTGTCATTACAGGAACGATGGGAGTCCTTAGTTTCTGATCATGTTGCCTTCTGAATTGGAAACATGCAATATTGTAATGATGATGTTGTGTTGGCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTACAGGGTGATTACATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027629

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