BGIOSGA027638

From RiceWiki
Revision as of 07:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027638| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027638, complete gene.| tag = OJ1066_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027638

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027638, complete gene.

LocusTag

OJ1066_B03.121-1

Ensembl Transcript ID

BGIOSGA027638-TA

Ensembl Protein ID

BGIOSGA027638-PA

Length

3453

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3248442..3251894

Sequence Coding Region

3251835..3251894,3251593..3251713),complement(3251425..3251503,3251242..3251317),complement(3251069..3251152
,3250889..3250993),complement(3250673..3250753,3250519..3250583),complement(3249944..3250013
,3249792..3249869),complement(3249192..3249289,3248980..3249115),complement(3248442..3248588

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3248442..3251894 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3248442..3251894 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCAGGCCTGTGGCCTTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGAGTGCTATAGATACAGCATTGGCAGACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGCCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAATAGATGCTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGTGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTCACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAGACGTACAACTTCACTGAAGAGGAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MALSISTPPTSSSLLPASLQVGRWSSSAAMSARPVAFSLRRPVLAARVAAGGNAPSSSVDEVVTELDAVASFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADGECNTMEKPEDRMSCFLTKALANVGAEMAHLVPGRVSTEIDARLAYDTQGIIQRVHELLKLYSDHDVLSERLLFKIPATWQGIEASRLLESEGIQTHLTFVYSFAQAAAAAQAGASVVQIFVGRVRDWARTHSGDPEIDEALKKGEDAGLALVKKVYAYIHKNGYKTKLMAAAIRNKQDVFSLLGIDYIIAPLKILQSLEESVTDTDVKYGYVPRLTPALGKTYNFTEEELVKWDQLSLAAAMGPAAEELLASGLEGYVNQARRVEELFGKIWPPPNV</aaseq>

Gene Sequence

<dnaseqindica>1..60#182..302#392..470#578..653#743..826#902..1006#1142..1222#1312..1376#1882..1951#2026..2103#2606..2703#2780..2915#3307..3453#ATGGCGCTCTCCATCTCCACGCCGCCGACCTCCTCCTCCCTCCTGCCGGCCTCCCTCCAGGTACGCCCTCCCGCTCCGCCGCCTCCTCCTCTCTCCGACGAGCTCTCATTTGCCCGGTTCGGCCGCTCCTCGCGCCCGTTTCACCCGTTCTTGGTCACCGCCGCCGCTTCTTCCTCTTCAGGTCGGCAGGTGGAGCTCGTCGGCGGCGATGTCGGCCAGGCCTGTGGCCTTTAGCCTCCGGAGGCCGGTTCTTGCGGCCCGTGTAGCCGCCGGCGGCAACGCACCGTCTTCCTCCGTGGACGGTAAGGATGCTGGCCTTGTGCTTGTCAGTTGTCTCCTTCATGGCTTCCTGTGTGATTTGAGTTACTGATTTTGGTCAGCTTGGTTGTAGAGGTGGTCACTGAGCTCGATGCCGTGGCCAGCTTCAGCGAGATCGTGCCGGATACCGTCGTGTTCGATGACTTCGAGAAGTAATACTAGTAGTTGCTTCTTTGCTGTTATCCCACCATTGAATTTGGTTGGCCGATCCAACTTAATGGAATGATAGTTCATAGGCTGCTCTGTTGATTGGGTTCAGGTTTGCGCCGACCGCCGCCACGGTGAGCTCGTCGCTGCTGCTCGGTATCGCTGGCCTCCCGGATACAAAGTTCAAGGTGAGGTGCTGTTGAAATGTGAAGCCAATCAAAGCACTGGAAGTGGAAGAGAGACAGTTGACTAATTTTCAGACTTTTGTTTCTTATAGAGTGCTATAGATACAGCATTGGCAGACGGTGAATGTAACACAATGGAGAAGCCCGAGGACCGGATGTCCTGTTTCCTAACCAAGGTTTGCATACTGCATTTCAGTTTCAATGTAAGCAGTCTGTTTGTTGGATAAGTTGAGCATGGAGGAATTTGGCAGGCCCTGGCAAATGTTGGAGCTGAAATGGCTCATCTAGTCCCTGGTCGGGTGTCGACTGAAATAGATGCTCGGTTGGCTTATGATACCCAAGGAATTATCCAGAGGGTATGAGCTTCTTCCTTCTGTTTGTTGTTTCATGCTGCTTGCCTGAAATATTTATCCTTAGGGGAAAAGAATCCTCTGTGAATTGTGATCTGCAGTTGCAGTCCCATGAAAATAATTTGATATGCGTATGTTCAGGTGCATGAGCTTTTGAAGCTATACAGTGATCATGATGTCTTATCTGAACGCCTGCTGTTCAAAATTCCGGCTACATGGCAAGTAAGTAGAATGCAACACAGTAGTTGGCAAGTTGCCTGGTTGTACCTGCTGCCATTTCCCATCTTTGTAATCGATGTGTTCTCCACTAGGGTATAGAGGCCTCGAGGTTGCTTGAATCTGAAGGGATTCAAACACATTTAACATTTGTGTACAGGTATGTACATATGCTTTGCCTAATTTGATCATGGCCCTATTTCTTATAGTGGGCAATGGTATAGATGCTGGGTGTATGGCAATACTTATCTTTTTTGTGGGGTTAGAGAACTGCCTTCAATTTGTTTAGTCTTAAGATACTTCAGTAAGTATAAGGGAACTAATAAAGATTGTTTCTTATTATCATGCATCACTTATTAATGATGGCTCAATTGCATTGTAAGTATACATTTTGCTTTTATGTCAGCAGAAGAAGAGGTTTTCTATTGAATTTACCTGGTGAATTGTAATTACTCAATTAGGCCTGACTAGTTACTGTTGATAACAAGCTTATCTATAAAGGACTTGCACTATTGCAGGTGCATAAAAGCCATAAACTTACTCTTGCAATTTACATAAGATGGTATTGTTGGAGAGAGCAGACTGCAGGATGTGTAGCTCACCTAGTAGTTAGTAACTGAGAACTCGTAATCATTTTTTTTGTGTGCCTGATCATTCTTCTTCAGTTTTGCCCAAGCAGCAGCTGCAGCACAAGCCGGTGCATCTGTTGTACAGATCTTTGTGGGACGTGTTCGGGTAAATTCATCAGACCCTTACCTTCATGGGTTTATGCTAATTCAAAAAAATTATGCTGACCACAAATTATGCAGGATTGGGCAAGGACTCACTCTGGCGACCCAGAGATTGATGAAGCTTTGAAGAAAGGAGAAGATGCTGGGCTTGCTTTGGTTAGCACTAAATTACCTTTTAATTTATGATTGTTCCTACAGAATTCTATCAATATGAACTAAAGTAGCCACATTTTGATAATCATGATAACTGACTATTTGAGCTCAACTAAAATATATTTAGTTGATTAGAGGTTGTGTACTTAACTATATCAGGTAATATGAACTATGCTTGGGTTGATTCTAGGACTTGGCATATTTTAGACTCCATTTGGTTCTCATCATCAACAATTTTGAGCAAACCATGTGTTAATCTGGCATGTTGCCCATGTTATAGTGTAATTGATAAAACTCATATAACTGAATAATCAGTGACAATTATCAAGGTTTTCATTAATAAAGGGACTATGAATGAAGAACATTATACTTATCAAGCGTTCACGTCTTCTCAATTCGATACTGAACTAAATTTCCGTTTACTCTCTACATGTTTTACATTCCTTACTTTTTCTGCAGTTGCATAAGTATTTAGTTCTCCATATAATTCTATATTGTAATGCAGGTGAAGAAAGTGTATGCCTACATTCACAAAAATGGGTATAAAACAAAGTTGATGGCTGCTGCCATACGCAACAAGCAAGATGTGTTTAGCCTCCTGGGGTATTTTTCTTATTACAGATCAAGATTGATCGCAATGGATGTTAGTTTGTACAGAACTAATATTTCTGAAATGTAGGATTGACTACATCATTGCACCTCTGAAGATATTGCAGTCTTTGGAAGAATCTGTCACTGATACTGACGTGAAGTATGGTTATGTCCCAAGGCTGACTCCTGCTCTTGGCAAGACGTACAACTTCACTGAAGAGGAGGTTTGCTCACTTATCCTGGATTTTGTGCAGAGTCTTATATCATGCATTCTGTAGCTCCACCAAACTACTCGCTATAAGAGACTCCTATTAGGGGTGTGATGTTTTATCTAAAATATATAGGATCTTCACTTGTCATGTGCTTTAACACTACTAGAGATGAAATAAGGAAGGAAAATAATATTTGGACTGTTTAGATCACCCTTAAAAGGTCATGTCAAAGCTCGTAGTAGGTGTAATCATGATTCACCAAACAGTTACTAGAACAATACAAACAAGTCATTGACATCCTATAAGAAGAGGAAAAATAAAACAAGAGAAGATAAGTGATTATATTTTTTATATGGCACCTTCATGCTAACTGTTCATATTTCAAATGATACCACGAATGCAGCTTGTGAAGTGGGACCAATTGAGTCTAGCAGCTGCAATGGGGCCAGCTGCGGAAGAACTACTTGCTTCTGGGTTGGAAGGATATGTGAACCAAGCACGCCGAGTGGAGGAACTCTTCGGGAAGATCTGGCCTCCTCCGAATGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027638

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027638&oldid=33895"