BGIOSGA027667

From RiceWiki
Revision as of 07:46, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027667| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027667, complete gene.| tag = P0025F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027667

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027667, complete gene.

LocusTag

P0025F03.21

Ensembl Transcript ID

BGIOSGA027667-TA

Ensembl Protein ID

BGIOSGA027667-PA

Length

5922

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2512872..2518793

Sequence Coding Region

2518654..2518793,2517174..2517241),complement(2517026..2517096,2516645..2516860),complement(2515861..2516024
,2515666..2515721),complement(2515508..2515560,2515270..2515387),complement(2513062..2513159
,2512872..2512940

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2512872..2518793 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2512872..2518793 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAGCATCGGCGGCGACGAGGCGGCGGTGCTGCGGGCGGAGGAGTCGGCGTCGGGGGGCGTCGACGTGTGGAGCGACGCCGTCTCCTCCCACGACCCCGACCACCTCCTCGTCATGGTCCACGGCATCCTCGGCAGTAATGCTGACTGGCAATATGCGGCTAACGAATTTGTAAAGCAACTTCCTGATGATGTAATCGTGCACTGCAGTGAGAAAAACATTAATACCTTGACTCTAGAAGGTGTAGATGTTATGGGGGAACGTTTAGCAGATGAGGTGATCGATGTAATCATTCGAAAGCCAGAACTCACTAAGATTTCCTTTCTTGCACACTCTGTTGGAGGATTAGCAGCAAGATATGCAATTGCAAAGCTTTATAGACATCCAAGTGACACATCCAAGAGTGAAACGAAAGGAACCATCTGCGGGTTGGAAGCAATGAACTTTATAACCGTAGCAACACCTCACCTTGGGTCTCGAGGGAACAATCAGGTTCCCCTTCTCTTTGGGTCCATTGCAATGGAAAATTTTGCTTCTCGTGTGGTCCATTGGATATTTAGGAGAACTGGGAAACATCTTTTTCTCACTGATGATGATGAGGGAGAACCACCATTGTTGCAGCGCATGGCTGAAGATTATGGTGATCTTTATTTCATATCTGCTTTGCATGCATTTAGACGACGAGTGGCTTATGCAAATGTCGACTGCGATCACATTGTTGGCTGGAGAACATCGTCTATCAGAAGAAAGACTGAGCTGCCTAAGTGGGAGGAATCGATATCTGAAAAGTACCCCCACATTGTACATGAGGAATACTCAGAAGAACTCGGTGATGAAACATGTCAAAATTCGGCAACAGTTTGTGATTCAGACATATTGGAAGAAAAAATGGTGACAGGACTTCGACGAGTATCATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSIGGDEAAVLRAEESASGGVDVWSDAVSSHDPDHLLVMVHGILGSNADWQYAANEFVKQLPDDVIVHCSEKNINTLTLEGVDVMGERLADEVIDVIIRKPELTKISFLAHSVGGLAARYAIAKLYRHPSDTSKSETKGTICGLEAMNFITVATPHLGSRGNNQVPLLFGSIAMENFASRVVHWIFRRTGKHLFLTDDDEGEPPLLQRMAEDYGDLYFISALHAFRRRVAYANVDCDHIVGWRTSSIRRKTELPKWEESISEKYPHIVHEEYSEELGDETCQNSATVCDSDILEEKMVTGLRRVSWEKVDVSFHTSMQRFAAHSIIQVKYQFMNEGADVIQHIIDHFQV</aaseq>

Gene Sequence

<dnaseqindica>1..140#1553..1620#1698..1768#1934..2149#2770..2933#3073..3128#3234..3286#3407..3524#5635..5732#5854..5922#ATGGGCAGCATCGGCGGCGACGAGGCGGCGGTGCTGCGGGCGGAGGAGTCGGCGTCGGGGGGCGTCGACGTGTGGAGCGACGCCGTCTCCTCCCACGACCCCGACCACCTCCTCGTCATGGTCCACGGCATCCTCGGCAGGTTCCCCCCCCCCCCTACTATCCTCCCCCTTCCGCTCTATGGCTGCTTCAGGGATTGAATCCTGTCTGGTTGATCGGTTGGTTGATGAGGTGGGGGTGGCGAGCGGCGGCTGAAATGTTTCACAGATCGGATGTGGATGTAGTGGAATCCTCTCCGTGCCATTGCTGCTTATGCTACCCTGGTCTTAGAATGTGTGATTTCGAGGAGTAGAGGATGCGGTTGTGGCTGCCTTGAGATTGTAGTAGCTTTGATGCTGGTGTTTCCCCAATTGGGGGTCCTAAAATAGGGGTGTGCTTTATTACGTTGAAATGATATAATTACATTGCTGCCCAGTGTGTGTCAAATTCTGGATTTAATGTAGAATTATTTTTTTTTCTTTGCCTGCATTAGTGTGTGAATTTCGCCAGGCGCGATTGCCTCTTGCTAGTGTTTTTTCATCTCGTGCGGAGCGACATTGCTCCCGTCTGATCGAAGAGCATGTCACTGCTGCTTTTGTTACGCGAATGGACAGCACTAGGGATGTAGTGAAAGGAGAAGGATCAGTGTCAATGCTACCTCTGGCTGTAGCCTATTCTTGATAATATGCCAATGCCAGTTATATACTTTTTTTTTATCTAATTAAGCTAAGGATTGTGTTCTTAGCTTAGGCTTATCTTCATGGCAGATTCAAAAACTTGCAGCTTGCAAACGGATTACAACAGCGGGGACAATTAAATACTTGAACAATGATATAATGTTTTTACAAAATGTTACTGCACAAGTTTTCCCCATCCTTTGATTTGAAACAATCGCCCATCATCTGTCCCTTAAATTAGGCCTCCACCATGCCACTCTTAGGGACCAATGTGGTAATTTGTTTGCATTGGGTCATTTGGATGTTGGCTGTGGCCTATATGGTTTATGTCTGCACTTTCTGGAGAAGTGCTATGCACACCTAGCTGAAAACAGGCATCACCTTATATGTGTAATTCCAGTTGCATTTAATTTTTTAATTTTAAAAGTCCCAACTTCCAACATAATTGAGCATTCTTCCATGGCAATAGATGATTTGAGAGTGAAATTCTAGATTAACTTCTTTCTATGCTCACATATTCCCTATTATTTCTCCCTTCTATGTTTCAAATACATTTTTTTTGTAGCGATGCTAGTGAGGATGAGGGTTCTACAAGAAGGATAAAACTAGGGAAATAATTATTTCACCCTTGGACTAGGCATGCAAAACTAGTATAGGTTGCCATACATGCAACTCTGTGTTCTGTTTGGTGATGCACTCTCATTCTTCAGTAAAGTTGACAATTGTATTTTTTTTCCTTTCATCAAAAGAAGTTACCATACAGTTGTGTTGCTTAACTATATAACCTTGTTTTTAATACTCTTATGGTCAATTTATTGTCTTTTTTTTCATTGAGCAGTAATGCTGACTGGCAATATGCGGCTAACGAATTTGTAAAGCAACTTCCTGATGATGTAATCGTGCACTGTAAGTTGCTACATTTTATTCTTTCCATTACTGACTACAGTTGCTAGTTTCAGTGACTTTTTTTTTTCAATTTACAGGCAGTGAGAAAAACATTAATACCTTGACTCTAGAAGGTGTAGATGTTATGGGGGAACGTTTAGCAGATGAGGTAAGTACCACCTTCAGCATATGTTTTGAACTTTGAGAGGCTATTATCTGGAGGTTAGCTGCTCTGTCATAGCGATTTTTCATTGAAATGATGTTGTGAATAATACTCTGTGCTCATCACAAAGCATATGTATTGGAGTCTCACTTCTATTCTCCCATTATTCAGGTGATCGATGTAATCATTCGAAAGCCAGAACTCACTAAGATTTCCTTTCTTGCACACTCTGTTGGAGGATTAGCAGCAAGATATGCAATTGCAAAGCTTTATAGACATCCAAGTGACACATCCAAGAGTGAAACGAAAGGAACCATCTGCGGGTTGGAAGCAATGAACTTTATAACCGTAGCAACACCTCACCTTGGGTCTCGAGGGAACAATCAGGTATTGTTGATGACTTGTTTTTATGTATTCCCTTTTCACTTCGACAGCCATTTGAGTTCTGAATTTTTACGTACCATCAGGGGGATGGAAGGTGTTATATATCATGTCTATGTATGATAAAATGTCTTCAAATCAATGCCCCAAAATTTTCTCATTTATTTTATCTATCCATTTTTCTGTTTGTATCAGGTATTATACTTCTTTCACGCATCATGGATTTACAGTCTATTGGGGTCATAGTTTTTTTAAGTGCCAGATATGCCATTGCTCAGTGTTTTTTTCTGGCAACAGAGCATTCGATGCCCCATATATAATTTTTTAAGTACTAGATGTCCATTGTTTTCTTATAATAAACACACAAAAAGGGCTTGTGCTTCTTGTCCGTTGCTCCTCCAAGTTCTGAGAACTCATGTACGAAAGACTTCAGATACGTTTTTTGTAACTTGTGCAGTTGAGCCATTTTACTTAGCTGCATGCTTATATTTGTAGCAAAGTTTTCAGATTTTTCTGGATATTCAAAGTCCTTTTTCCCTTCTGCATTCTATATGCCATATTCGACGAGCATTTTGGCGTTGCATCCACCCCTATAACTGTTCTGTGTCCTTACTGTTATGAATTAGGTTCCCCTTCTCTTTGGGTCCATTGCAATGGAAAATTTTGCTTCTCGTGTGGTCCATTGGATATTTAGGAGAACTGGGAAACATCTTTTTCTCACTGATGATGATGAGGGAGAACCACCATTGTTGCAGCGCATGGCTGAAGATTATGGTGATCTTTATTTCATGTAAGGTTATGATGCCTTTGTTTCTTTTCGATTATTTTCCTTTGCTATATATTTCTACTTTAAATTATTCGTTTATTATGGCATACGTTGTCTCGGTAATAACTGCCATAACTTGGGCTTTAGCTAACACTTTTTTCAGATCTGCTTTGCATGCATTTAGACGACGAGTGGCTTATGCAAATGTCGACTGCGATCGTATCCTTGTTATTTGAAATATCTTGGTTTTTGATGTAATGTTAAAAAATGTTCCATCTTAATTTAGACCTTCTACTTGTCAATTCTTTAATTCATGGCATTCAGACATTGTTGGCTGGAGAACATCGTCTATCAGAAGAAAGACTGAGCTGCCTAAGGTATTTTTATTGGTTCTGATTGTTCTTGGGCAATTGCCCAAGAAGAAGAGGAAGATTTCCGTGTAGCAAGAGCAACATTCTTCTGATAAAACGTCCATTTTGTCTGTTCATGATGTGCAGTGGGAGGAATCGATATCTGAAAAGTACCCCCACATTGTACATGAGGAATACTCAGAAGAACTCGGTGATGAAACATGTCAAAATTCGGCAACAGTTTGTGATTCAGACATATTGGAAGGTCAGTTTAGATAGTAGCAGCAGAATTGTTTTATGATGTTGTATCCATATTATCGGGATGTTTGGTTGATGCCTAACCTTGACATAACTAAGGTTAGGCAAGTTGTGGCATGGTTGCGCAAGTGTGGCTAAGAAATTGTCGGCCACAAATGTGGCATGGTTAGCTCCACATTTAAGAGTGTGACATTTGGGTCCCAAGGCTAAGAAAGTGTGGCATGATACAGTTGCGGCAGCCAAACAAACACATATCTAAGAAACTGTGGCATATGACTATATAAACATGGCAAAGTGCAGCAAACAACCAAACTATATGCAAACGATGATATTGTTTGTTTAGTCTTTACAAATTGAGTAAATCAACATAACACTGCTAAAATCAACTACACCTGTTTACTATCTAAACAATAAATGCCATGTTACTGAGATTTTTGTAATGTACTATTTTGATTTAACAACCAAGCATTTTTATGAGAGATTCTATGTTTGCCATCGACAAGCACTTGTACAATCTAATTTCTTAGAATTGGTGTTCGTTGATGGCAAAACTTGGAATCATGCGATTGTCGATGGCAAAACTTAAAATTTCTCTTATTTAATAATCTTTTTGGGTAGAAAAATTATGTGGACAATGTAATTGAGTAATGCTGAATCGAATCCCTGTCATTTGAACCGAGATATTCCAGAAGGTGTGCTCAATAGCATATTCAACTGATTTATTACAAAACTGTGCAATTTTATACTCAAAATTCACATTTTATGGTAGGCCTAGGTGATTGCTAAGAATTCCAGGGCCAGTTGGTCTATCTTTGAAGTTTCAGACTGAAGGAGTACCTACCATAATTTGACAATTAGGGGATGAATCCTTTTTTCATCTGTGAACATTGTACACAGTAAATTCCACAAGAAACATCTTGAGGATTGCTTATAGACTAAAATGTTGCCGTATAGGTATCTGTTGGTTAGCACCTACAAACCACAACCACCTTGACATATATTGCTTGTATTTTGATGGGTAAATGTGGTCAATATGATAGCTAGTTTTTTGTATTGTTTTTGTACTATTTCTGAACGGTAAAGTCGGAATTTGTTCCCTCAAGGAAATTTTTCTTAGTACCTGTTCTGAGTTGACTCATTCATGTAATGCCCCTACACCACCTAGAGTTACTTTTGATCATTTCTGAGGGATATTCAGGGGCATGGTATTTTTTTAAAGTAGTATGCATATTGATATTCAAATACCTGTAATATTTGGATATTTCCCATCCTTTTTTATTGCCTATACGTGCATGGAATCTCTTTTTTTTTTCAAGTTTGGACACCATTTCTCTGTATCTCCATCTAGCTGCACTATGGGTATGAATACATTTATAGAGGACATTTAGAAGAGACACCATTTGTTTCAAGATTCACATTTGTAACAATAGCTTAGACAGGGTATTCACTGTATTCCATTGCGTTATTTTTTTTTTCATCTGCTTTGCTGACTAATTGAGTATTTGAGTCATCGAGTCTGTTGATATGTTTAAAACATGGAGGTCCATGTTCCGGATATTCAATAATCAACTGATGACTAGTTGACTACAATCCTGGTGATGCATTGGTTTGATCTTTTGTCTTATGTTTCTTATCGTGCTACTCTTCATGCCTACAGTGCTGTTGTGGCCTTGTGGGTTTGTACTCCTAATACTTAGGACCTGAAAACTAGACACAGTATCATCTCTAATCATTGATTCCATTCTTCCAATATGGAAAATCTAAGGAATAAATTCTTCTATGATGAAATGGATTGAAGTTTTGTGCTTATTTTTTCATATAGATTAATTCAATGTGCTTATAAATTTCGTGAAAGCTATGGCCTAGTAATAGATGAGACATCACTGTTCTATGACATGAAATGGTAACAAGATAAGAATTGCATGTTAAGATTAGCAAACTATACGGCAAACTCCAGCCTCGCTACCATGCTTGTAATGAGGCATGGGAAATATCCAAGGAGTTGATGTCTGAAACCCACAACTAATTTGTTTGAAAGTCCTTGATGTCATATACTGAAAGTGCATGGAAATTCTCGACTGAAAATGTTTCTGTTTTCTGGTGGTTCTGTTATGCAGAAAAAATGGTGACAGGACTTCGACGAGTATCATGGGAAAAAGTAGATGTTAGCTTCCATACCAGCATGCAGAGATTTGCTGCACACAGCATAATCCAGGTTTATTATCTACCTGCTTCCTGTTGCTAAAACACGCCTTCTTCACTCATGGACATTCAAATGGGGAGCAAACTCTTCCTCTAACAAAAGGTTTAAAATCTTAATTTGCTGTTTGCTCCAGGTCAAGTACCAGTTTATGAACGAAGGCGCGGATGTCATACAGCACATAATAGACCACTTCCAAGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027667

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027667&oldid=33924"